RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 CD248Q9HCU0 757 aa18.13■□□□□ 0.49
COL4A3BP-203ENST00000380494 DONSONQ9NYP3 566 aa18.13■□□□□ 0.49
COL4A3BP-203ENST00000380494 CD58P19256 250 aa18.13■□□□□ 0.49
COL4A3BP-203ENST00000380494 ERP27Q96DN0 273 aa18.13■□□□□ 0.49
COL4A3BP-203ENST00000380494 NAF1Q96HR8 494 aaKnown RBP18.13■□□□□ 0.49
COL4A3BP-203ENST00000380494 C10orf88Q9H8K7 445 aa18.13■□□□□ 0.49
COL4A3BP-203ENST00000380494 RTN2O75298 545 aa18.13■□□□□ 0.49
COL4A3BP-203ENST00000380494 BMP3P12645 472 aa18.13■□□□□ 0.49
COL4A3BP-203ENST00000380494 ZBTB41Q5SVQ8 909 aa18.13■□□□□ 0.49
COL4A3BP-203ENST00000380494 OLFML2BQ68BL8 750 aa18.13■□□□□ 0.49
COL4A3BP-203ENST00000380494 NCOA3Q9Y6Q9 1424 aa18.13■□□□□ 0.49
COL4A3BP-203ENST00000380494 USP42Q9H9J4 1324 aaKnown RBP18.13■□□□□ 0.49
COL4A3BP-203ENST00000380494 CTCFP49711 727 aaPredicted RBP18.13■□□□□ 0.49
COL4A3BP-203ENST00000380494 DPYDQ12882 1025 aa18.13■□□□□ 0.49
COL4A3BP-203ENST00000380494 ADRM1Q16186 407 aa18.13■□□□□ 0.49
COL4A3BP-203ENST00000380494 HIF1AQ16665 826 aa18.13■□□□□ 0.49
COL4A3BP-203ENST00000380494 SIX6OS1Q8N1H7 587 aa18.13■□□□□ 0.49
COL4A3BP-203ENST00000380494 TTC8Q8TAM2 541 aa18.13■□□□□ 0.49
COL4A3BP-203ENST00000380494 MSTO1Q9BUK6 570 aa18.13■□□□□ 0.49
COL4A3BP-203ENST00000380494 GJB4Q9NTQ9 266 aa18.13■□□□□ 0.49
COL4A3BP-203ENST00000380494 SLC5A4Q9NY91 659 aa18.13■□□□□ 0.49
COL4A3BP-203ENST00000380494 CYTH1Q15438 398 aa18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 USP17L2Q6R6M4 530 aa18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 SGMS1Q86VZ5 419 aa18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 LARGE2Q8N3Y3 721 aa18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 LRRC4Q9HBW1 653 aa18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 RBM12Q9NTZ6 932 aaKnown RBP18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 MAGI3Q5TCQ9 1506 aa18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 HNRNPCL2B2RXH8 293 aa18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 PMLP29590 882 aa18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 JAK3P52333 1124 aa18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 ALDH18A1P54886 795 aaKnown RBP18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 NLRP11P59045 1033 aaKnown RBP18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 TRADDQ15628 312 aa18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 LRRC8EQ6NSJ5 796 aa18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 DTX3LQ8TDB6 740 aa18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 IRX2Q9BZI1 471 aaPredicted RBP18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 KDM4CQ9H3R0 1056 aa18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 TSC22D4Q9Y3Q8 395 aa18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 KRT75O95678 551 aa18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 SLC20A2Q08357 652 aa18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 CTTNQ14247 550 aaKnown RBP18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 ARMCX2Q7L311 632 aa18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 COL23A1Q86Y22 540 aaPredicted RBP18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 TEX12Q9BXU0 123 aa18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 DLGAP2Q9P1A6 1054 aa18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 NXF1Q9UBU9 619 aaKnown RBP18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 SLC26A4O43511 780 aa18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 ASCC2Q9H1I8 757 aaPredicted RBP18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 SLC44A4Q53GD3 710 aa18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 DDI1Q8WTU0 396 aa18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 AGPAT1Q99943 283 aa18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 TTC7AQ9ULT0 858 aaPredicted RBP18.12■□□□□ 0.49
COL4A3BP-203ENST00000380494 VAMP7P51809 220 aa18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 DSG1Q02413 1049 aa18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 DCAF15Q66K64 600 aa18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 RAD9BQ6WBX8 426 aa18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 ADCK1Q86TW2 530 aa18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 METTL23Q86XA0 190 aa18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 DCAF4Q8WV16 495 aa18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 TEKT4Q8WW24 435 aa18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 MS4A14Q96JA4 679 aa18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 NPHS2Q9NP85 383 aa18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 BLOC1S6Q9UL45 172 aa18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 IL6STP40189 918 aaPredicted RBP18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 DHX36Q9H2U1 1008 aaKnown RBP18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 MAGED2Q9UNF1 606 aaPredicted RBP18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 GOLGA8IPA6NC78 632 aa18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 GOLGA8JA6NMD2 632 aa18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 NQO1P15559 274 aaKnown RBP18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 RIN2Q8WYP3 895 aaPredicted RBP18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 FAM20AQ96MK3 541 aa18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 UBN1Q9NPG3 1134 aa18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 GID8Q9NWU2 228 aa18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 GGT7Q9UJ14 662 aa18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 CDC27P30260 824 aa18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 SLC16A2P36021 539 aa18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 FMR1Q06787 632 aaKnown RBP eCLIP18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 RYBPQ8N488 228 aaPredicted RBP18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 ZNF555Q8NEP9 628 aa18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 ASPSCR1Q9BZE9 553 aa18.11■□□□□ 0.49
COL4A3BP-203ENST00000380494 H7C1W4 665 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 SMAPO00193 183 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 FOXN1O15353 648 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 PRELPP51888 382 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 KDSRQ06136 332 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 C1orf54Q8WWF1 131 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 ARL8AQ96BM9 186 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 NSL1Q96IY1 281 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 CHP1Q99653 195 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 PI4K2BG5E9Z4 385 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 NPR1P16066 1061 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 GRM4Q14833 912 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 RFX8Q6ZV50 586 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 ADSSL1Q8N142 457 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 RNF25Q96BH1 459 aaPredicted RBP18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 RPF1Q9H9Y2 349 aaKnown RBP18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 ATP6V0A4Q9HBG4 840 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 CHCHD3Q9NX63 227 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms