RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 VCPKMTQ9H867 229 aa17.62■□□□□ 0.41
VPS16-203ENST00000380469 ERVK-5Q9HDB9 667 aa17.62■□□□□ 0.41
VPS16-203ENST00000380469 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.62■□□□□ 0.41
VPS16-203ENST00000380469 TMOD4Q9NZQ9 345 aa17.62■□□□□ 0.41
VPS16-203ENST00000380469 FEM1BQ9UK73 627 aa17.62■□□□□ 0.41
VPS16-203ENST00000380469 CAPN7Q9Y6W3 813 aa17.62■□□□□ 0.41
VPS16-203ENST00000380469 RBBP6Q7Z6E9 1792 aaKnown RBP17.62■□□□□ 0.41
VPS16-203ENST00000380469 H0YHG0 523 aa17.61■□□□□ 0.41
VPS16-203ENST00000380469 TRAPPC3O43617 180 aa17.61■□□□□ 0.41
VPS16-203ENST00000380469 RTN2O75298 545 aa17.61■□□□□ 0.41
VPS16-203ENST00000380469 TMOD1P28289 359 aa17.61■□□□□ 0.41
VPS16-203ENST00000380469 USP8P40818 1118 aa17.61■□□□□ 0.41
VPS16-203ENST00000380469 GCLMP48507 274 aa17.61■□□□□ 0.41
VPS16-203ENST00000380469 DRG2P55039 364 aaKnown RBP17.61■□□□□ 0.41
VPS16-203ENST00000380469 MSL1Q68DK7 614 aa17.61■□□□□ 0.41
VPS16-203ENST00000380469 JAMLQ86YT9 394 aa17.61■□□□□ 0.41
VPS16-203ENST00000380469 ARHGEF19Q8IW93 802 aa17.61■□□□□ 0.41
VPS16-203ENST00000380469 GLG1Q92896 1179 aa17.61■□□□□ 0.41
VPS16-203ENST00000380469 CYFIP2Q96F07 1278 aa17.61■□□□□ 0.41
VPS16-203ENST00000380469 TXLNGYQ9BZA5 131 aa17.61■□□□□ 0.41
VPS16-203ENST00000380469 PKD2L1Q9P0L9 805 aa17.61■□□□□ 0.41
VPS16-203ENST00000380469 TMEM110-MUSTN1A8MSY1 372 aa17.61■□□□□ 0.41
VPS16-203ENST00000380469 PHF2O75151 1096 aa17.61■□□□□ 0.41
VPS16-203ENST00000380469 CHRNA3P32297 505 aa17.61■□□□□ 0.41
VPS16-203ENST00000380469 PPP3CAQ08209 521 aa17.61■□□□□ 0.41
VPS16-203ENST00000380469 ICE2Q659A1 982 aa17.61■□□□□ 0.41
VPS16-203ENST00000380469 C12orf56Q8IXR9 622 aa17.61■□□□□ 0.41
VPS16-203ENST00000380469 XXYLT1Q8NBI6 393 aa17.61■□□□□ 0.41
VPS16-203ENST00000380469 TMEM174Q8WUU8 243 aa17.61■□□□□ 0.41
VPS16-203ENST00000380469 RPS6KC1Q96S38 1066 aa17.61■□□□□ 0.41
VPS16-203ENST00000380469 CNOT10Q9H9A5 744 aaKnown RBP17.61■□□□□ 0.41
VPS16-203ENST00000380469 ZDHHC18Q9NUE0 388 aa17.61■□□□□ 0.41
VPS16-203ENST00000380469 CLRN2A0PK11 232 aa17.6■□□□□ 0.41
VPS16-203ENST00000380469 FSBPO95073 299 aa17.6■□□□□ 0.41
VPS16-203ENST00000380469 PLS3P13797 630 aa17.6■□□□□ 0.41
VPS16-203ENST00000380469 GBP1P32455 592 aa17.6■□□□□ 0.41
VPS16-203ENST00000380469 PMS2P54278 862 aa17.6■□□□□ 0.41
VPS16-203ENST00000380469 PLTPP55058 493 aa17.6■□□□□ 0.41
VPS16-203ENST00000380469 IFT88Q13099 833 aa17.6■□□□□ 0.41
VPS16-203ENST00000380469 EPC2Q52LR7 807 aa17.6■□□□□ 0.41
VPS16-203ENST00000380469 MORC4Q8TE76 937 aa17.6■□□□□ 0.41
VPS16-203ENST00000380469 FAM151AQ8WW52 585 aa17.6■□□□□ 0.41
VPS16-203ENST00000380469 KAT2BQ92831 832 aa17.6■□□□□ 0.41
VPS16-203ENST00000380469 KCNH7Q9NS40 1196 aa17.6■□□□□ 0.41
VPS16-203ENST00000380469 DBR1Q9UK59 544 aaKnown RBP17.6■□□□□ 0.41
VPS16-203ENST00000380469 ZNF646O15015 1829 aaPredicted RBP17.6■□□□□ 0.41
VPS16-203ENST00000380469 GGPS1O95749 300 aa17.6■□□□□ 0.41
VPS16-203ENST00000380469 ITGB5P18084 799 aa17.6■□□□□ 0.41
VPS16-203ENST00000380469 SEL1L2Q5TEA6 688 aa17.6■□□□□ 0.41
VPS16-203ENST00000380469 CNKSR1Q969H4 720 aa17.6■□□□□ 0.41
VPS16-203ENST00000380469 ZSWIM1Q9BR11 485 aa17.6■□□□□ 0.41
VPS16-203ENST00000380469 CBWD1Q9BRT8 395 aa17.6■□□□□ 0.41
VPS16-203ENST00000380469 HSPBP1Q9NZL4 362 aa17.6■□□□□ 0.41
VPS16-203ENST00000380469 CNOT8Q9UFF9 292 aaKnown RBP17.6■□□□□ 0.41
VPS16-203ENST00000380469 BCS1LQ9Y276 419 aa17.6■□□□□ 0.41
VPS16-203ENST00000380469 SNX24Q9Y343 169 aa17.6■□□□□ 0.41
VPS16-203ENST00000380469 SPDYE2BA6NHP3 402 aa17.59■□□□□ 0.41
VPS16-203ENST00000380469 TISP43B9A030 160 aa17.59■□□□□ 0.41
VPS16-203ENST00000380469 PODXLO00592 558 aa17.59■□□□□ 0.41
VPS16-203ENST00000380469 PAEPP09466 180 aa17.59■□□□□ 0.41
VPS16-203ENST00000380469 SPDYE6P0CI01 402 aa17.59■□□□□ 0.41
VPS16-203ENST00000380469 PPARDQ03181 441 aa17.59■□□□□ 0.41
VPS16-203ENST00000380469 DENND2CQ68D51 928 aa17.59■□□□□ 0.41
VPS16-203ENST00000380469 SUPT20HQ8NEM7 779 aa17.59■□□□□ 0.41
VPS16-203ENST00000380469 RAPGEF5Q92565 580 aa17.59■□□□□ 0.41
VPS16-203ENST00000380469 WNT8AQ9H1J5 351 aa17.59■□□□□ 0.41
VPS16-203ENST00000380469 PABPC3Q9H361 631 aaKnown RBP17.59■□□□□ 0.41
VPS16-203ENST00000380469 PARP2Q9UGN5 583 aa17.59■□□□□ 0.41
VPS16-203ENST00000380469 ZHX2Q9Y6X8 837 aa17.59■□□□□ 0.41
VPS16-203ENST00000380469 KIAA0391O15091 583 aaKnown RBP17.59■□□□□ 0.41
VPS16-203ENST00000380469 MAPK13O15264 365 aa17.59■□□□□ 0.41
VPS16-203ENST00000380469 HSD17B4P51659 736 aa17.59■□□□□ 0.41
VPS16-203ENST00000380469 SNRPFP62306 86 aaKnown RBP17.59■□□□□ 0.41
VPS16-203ENST00000380469 MESDQ14696 234 aa17.59■□□□□ 0.41
VPS16-203ENST00000380469 FBXW10Q5XX13 1052 aa17.59■□□□□ 0.41
VPS16-203ENST00000380469 C18orf8Q96DM3 657 aa17.59■□□□□ 0.41
VPS16-203ENST00000380469 FBXO28Q9NVF7 368 aa17.59■□□□□ 0.41
VPS16-203ENST00000380469 ZNF70Q9UC06 446 aaPredicted RBP17.59■□□□□ 0.41
VPS16-203ENST00000380469 CCPG1Q9ULG6 757 aa17.59■□□□□ 0.41
VPS16-203ENST00000380469 DCDC2CA8MYV0 355 aa17.58■□□□□ 0.41
VPS16-203ENST00000380469 PPIP5K2O43314 1243 aa17.58■□□□□ 0.41
VPS16-203ENST00000380469 SGPL1O95470 568 aa17.58■□□□□ 0.41
VPS16-203ENST00000380469 NUDT17P0C025 328 aa17.58■□□□□ 0.41
VPS16-203ENST00000380469 GZMAP12544 262 aa17.58■□□□□ 0.41
VPS16-203ENST00000380469 COMTP21964 271 aa17.58■□□□□ 0.41
VPS16-203ENST00000380469 PTGIRP43119 386 aa17.58■□□□□ 0.41
VPS16-203ENST00000380469 QARSP47897 775 aaKnown RBP17.58■□□□□ 0.41
VPS16-203ENST00000380469 MXI1P50539 228 aa17.58■□□□□ 0.41
VPS16-203ENST00000380469 GRIPAP1Q4V328 841 aa17.58■□□□□ 0.41
VPS16-203ENST00000380469 ZNF746Q6NUN9 644 aaPredicted RBP17.58■□□□□ 0.41
VPS16-203ENST00000380469 AADACL2Q6P093 401 aa17.58■□□□□ 0.41
VPS16-203ENST00000380469 CCDC121Q6ZUS5 278 aa17.58■□□□□ 0.41
VPS16-203ENST00000380469 NIPA1Q7RTP0 329 aa17.58■□□□□ 0.41
VPS16-203ENST00000380469 ARMC9Q7Z3E5 817 aa17.58■□□□□ 0.41
VPS16-203ENST00000380469 HAUS6Q7Z4H7 955 aa17.58■□□□□ 0.41
VPS16-203ENST00000380469 SUGP1Q8IWZ8 645 aaKnown RBP17.58■□□□□ 0.41
VPS16-203ENST00000380469 CNPY4Q8N129 248 aa17.58■□□□□ 0.41
VPS16-203ENST00000380469 KRT35Q92764 455 aa17.58■□□□□ 0.41
VPS16-203ENST00000380469 TLCD1Q96CP7 247 aa17.58■□□□□ 0.41
VPS16-203ENST00000380469 IWS1Q96ST2 819 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms