RNA–Protein interactions for RNA: ENST00000380171.7

ATRAID-201, Transcript of all-trans retinoic acid induced differentiation factor, humanhuman

TSL 1 (best) BASIC

Gene ATRAID, Length 1,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRAID-201ENST00000380171 DNAJC19Q96DA6 116 aa29.52■■■□□ 2.32
ATRAID-201ENST00000380171 LRCH3Q96II8 777 aa29.52■■■□□ 2.32
ATRAID-201ENST00000380171 FZD8Q9H461 694 aa29.52■■■□□ 2.32
ATRAID-201ENST00000380171 PCDHA11Q9Y5I1 949 aa29.52■■■□□ 2.32
ATRAID-201ENST00000380171 H0YCG3 227 aa29.51■■■□□ 2.31
ATRAID-201ENST00000380171 K7ENM7 598 aa29.51■■■□□ 2.31
ATRAID-201ENST00000380171 K7ERI5 159 aa29.51■■■□□ 2.31
ATRAID-201ENST00000380171 SLFN14P0C7P3 912 aa29.51■■■□□ 2.31
ATRAID-201ENST00000380171 ARF4P18085 180 aaPredicted RBP29.51■■■□□ 2.31
ATRAID-201ENST00000380171 DNAJB2P25686 324 aa29.51■■■□□ 2.31
ATRAID-201ENST00000380171 HOXA11P31270 313 aaPredicted RBP29.51■■■□□ 2.31
ATRAID-201ENST00000380171 NCKAP1LP55160 1127 aa29.51■■■□□ 2.31
ATRAID-201ENST00000380171 PRPF4BQ13523 1007 aaKnown RBP29.51■■■□□ 2.31
ATRAID-201ENST00000380171 SFR1Q86XK3 245 aa29.51■■■□□ 2.31
ATRAID-201ENST00000380171 CCDC51Q96ER9 411 aa29.51■■■□□ 2.31
ATRAID-201ENST00000380171 YME1L1Q96TA2 773 aa29.51■■■□□ 2.31
ATRAID-201ENST00000380171 TRIM9Q9C026 710 aa29.51■■■□□ 2.31
ATRAID-201ENST00000380171 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP29.5■■■□□ 2.31
ATRAID-201ENST00000380171 GAP43P17677 238 aa29.5■■■□□ 2.31
ATRAID-201ENST00000380171 AFMP43652 599 aa29.5■■■□□ 2.31
ATRAID-201ENST00000380171 RAB27AP51159 221 aa29.5■■■□□ 2.31
ATRAID-201ENST00000380171 ASIC1P78348 528 aa29.5■■■□□ 2.31
ATRAID-201ENST00000380171 ECHDC2Q86YB7 292 aa29.5■■■□□ 2.31
ATRAID-201ENST00000380171 FAM178BQ8IXR5 827 aa29.5■■■□□ 2.31
ATRAID-201ENST00000380171 RNF169Q8NCN4 708 aa29.5■■■□□ 2.31
ATRAID-201ENST00000380171 TMEM161BQ8NDZ6 487 aa29.5■■■□□ 2.31
ATRAID-201ENST00000380171 NTPCRQ9BSD7 190 aaKnown RBP29.5■■■□□ 2.31
ATRAID-201ENST00000380171 TMEM134Q9H6X4 195 aa29.5■■■□□ 2.31
ATRAID-201ENST00000380171 YBX2Q9Y2T7 364 aaKnown RBP29.5■■■□□ 2.31
ATRAID-201ENST00000380171 PCDHB7Q9Y5E2 793 aa29.5■■■□□ 2.31
ATRAID-201ENST00000380171 ACKR2O00590 384 aa29.49■■■□□ 2.31
ATRAID-201ENST00000380171 TRAK2O60296 914 aa29.49■■■□□ 2.31
ATRAID-201ENST00000380171 SKIP12755 728 aa29.49■■■□□ 2.31
ATRAID-201ENST00000380171 MYOGP15173 224 aa29.49■■■□□ 2.31
ATRAID-201ENST00000380171 LONRF3Q496Y0 759 aa29.49■■■□□ 2.31
ATRAID-201ENST00000380171 CCDC65Q8IXS2 484 aa29.49■■■□□ 2.31
ATRAID-201ENST00000380171 GRAMD1CQ8IYS0 662 aa29.49■■■□□ 2.31
ATRAID-201ENST00000380171 RAD9AQ99638 391 aa29.49■■■□□ 2.31
ATRAID-201ENST00000380171 FAM105AQ9NUU6 356 aa29.49■■■□□ 2.31
ATRAID-201ENST00000380171 TMEM161AQ9NX61 479 aa29.49■■■□□ 2.31
ATRAID-201ENST00000380171 COL4A6Q14031 1691 aa29.48■■■□□ 2.31
ATRAID-201ENST00000380171 A0A0U1RQF3 1178 aa29.48■■■□□ 2.31
ATRAID-201ENST00000380171 EDN1P05305 212 aa29.48■■■□□ 2.31
ATRAID-201ENST00000380171 MAPTP10636 758 aaKnown RBP29.48■■■□□ 2.31
ATRAID-201ENST00000380171 STRN3Q13033 797 aa29.48■■■□□ 2.31
ATRAID-201ENST00000380171 TMEM87AQ8NBN3 555 aa29.48■■■□□ 2.31
ATRAID-201ENST00000380171 TIFAQ96CG3 184 aa29.48■■■□□ 2.31
ATRAID-201ENST00000380171 TRAIPQ9BWF2 469 aa29.48■■■□□ 2.31
ATRAID-201ENST00000380171 NKX2-4Q9H2Z4 354 aa29.48■■■□□ 2.31
ATRAID-201ENST00000380171 ELAC1Q9H777 363 aaKnown RBP29.48■■■□□ 2.31
ATRAID-201ENST00000380171 PANK4Q9NVE7 773 aa29.48■■■□□ 2.31
ATRAID-201ENST00000380171 SEL1LQ9UBV2 794 aa29.48■■■□□ 2.31
ATRAID-201ENST00000380171 INSL6Q9Y581 213 aa29.48■■■□□ 2.31
ATRAID-201ENST00000380171 N4BP3O15049 544 aa29.47■■■□□ 2.31
ATRAID-201ENST00000380171 CA3P07451 260 aa29.47■■■□□ 2.31
ATRAID-201ENST00000380171 FXR1P51114 621 aaKnown RBP eCLIP29.47■■■□□ 2.31
ATRAID-201ENST00000380171 FAM189BP81408 668 aa29.47■■■□□ 2.31
ATRAID-201ENST00000380171 HTRA4P83105 476 aaPredicted RBP29.47■■■□□ 2.31
ATRAID-201ENST00000380171 UBXN11Q5T124 520 aa29.47■■■□□ 2.31
ATRAID-201ENST00000380171 TAS1R3Q7RTX0 852 aa29.47■■■□□ 2.31
ATRAID-201ENST00000380171 HAUS6Q7Z4H7 955 aa29.47■■■□□ 2.31
ATRAID-201ENST00000380171 CDR2LQ86X02 465 aaPredicted RBP29.47■■■□□ 2.31
ATRAID-201ENST00000380171 C7orf25Q9BPX7 421 aa29.47■■■□□ 2.31
ATRAID-201ENST00000380171 MRPL4Q9BYD3 311 aaKnown RBP29.47■■■□□ 2.31
ATRAID-201ENST00000380171 BLZF1Q9H2G9 400 aa29.47■■■□□ 2.31
ATRAID-201ENST00000380171 USP20Q9Y2K6 914 aa29.47■■■□□ 2.31
ATRAID-201ENST00000380171 FRMD3A2A2Y4 597 aa29.46■■■□□ 2.31
ATRAID-201ENST00000380171 TTLL13PA6NNM8 815 aa29.46■■■□□ 2.31
ATRAID-201ENST00000380171 CASP1P29466 404 aa29.46■■■□□ 2.31
ATRAID-201ENST00000380171 HERC4Q5GLZ8 1057 aaPredicted RBP29.46■■■□□ 2.31
ATRAID-201ENST00000380171 CNNM4Q6P4Q7 775 aa29.46■■■□□ 2.31
ATRAID-201ENST00000380171 SLC27A1Q6PCB7 646 aa29.46■■■□□ 2.31
ATRAID-201ENST00000380171 CRIPAKQ8N1N5 446 aa29.46■■■□□ 2.31
ATRAID-201ENST00000380171 SLC17A8Q8NDX2 589 aa29.46■■■□□ 2.31
ATRAID-201ENST00000380171 CNNM3Q8NE01 707 aa29.46■■■□□ 2.31
ATRAID-201ENST00000380171 PAGE5Q96GU1 130 aa29.46■■■□□ 2.31
ATRAID-201ENST00000380171 TRIM6Q9C030 488 aaPredicted RBP29.46■■■□□ 2.31
ATRAID-201ENST00000380171 PDZD7Q9H5P4 517 aa29.46■■■□□ 2.31
ATRAID-201ENST00000380171 PCDHB2Q9Y5E7 798 aa29.46■■■□□ 2.31
ATRAID-201ENST00000380171 FNDC1Q4ZHG4 1894 aaPredicted RBP29.45■■■□□ 2.31
ATRAID-201ENST00000380171 A0A1B0GUA9 196 aa29.45■■■□□ 2.31
ATRAID-201ENST00000380171 LCHNA4D1U4 455 aa29.45■■■□□ 2.31
ATRAID-201ENST00000380171 ZNF202O95125 648 aa29.45■■■□□ 2.31
ATRAID-201ENST00000380171 NPTXRO95502 500 aa29.45■■■□□ 2.31
ATRAID-201ENST00000380171 SCP2P22307 547 aa29.45■■■□□ 2.31
ATRAID-201ENST00000380171 NMT1P30419 496 aaKnown RBP29.45■■■□□ 2.31
ATRAID-201ENST00000380171 COASYQ13057 564 aa29.45■■■□□ 2.31
ATRAID-201ENST00000380171 ATF7IP2Q5U623 682 aa29.45■■■□□ 2.31
ATRAID-201ENST00000380171 KRBA2Q6ZNG9 492 aa29.45■■■□□ 2.31
ATRAID-201ENST00000380171 FIZ1Q96SL8 496 aa29.45■■■□□ 2.31
ATRAID-201ENST00000380171 EIF2AQ9BY44 585 aaKnown RBP29.45■■■□□ 2.31
ATRAID-201ENST00000380171 MRPL44Q9H9J2 332 aaKnown RBP29.45■■■□□ 2.31
ATRAID-201ENST00000380171 TBC1D7Q9P0N9 293 aa29.45■■■□□ 2.31
ATRAID-201ENST00000380171 LAMA3Q16787 3333 aa29.45■■■□□ 2.3
ATRAID-201ENST00000380171 HOXA2O43364 376 aa29.44■■■□□ 2.3
ATRAID-201ENST00000380171 DGKIO75912 1065 aa29.44■■■□□ 2.3
ATRAID-201ENST00000380171 FGFR1P11362 822 aa29.44■■■□□ 2.3
ATRAID-201ENST00000380171 ATF7P17544 494 aaPredicted RBP29.44■■■□□ 2.3
ATRAID-201ENST00000380171 ABCD1P33897 745 aa29.44■■■□□ 2.3
ATRAID-201ENST00000380171 FAM160A1Q05DH4 1040 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms