RNA–Protein interactions for RNA: ENST00000380151.3

CDKN2A-203, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best)

Gene CDKN2A, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-203ENST00000380151 TMEM173Q86WV6 379 aaPredicted RBP26.45■■□□□ 1.82
CDKN2A-203ENST00000380151 IFNLR1Q8IU57 520 aaPredicted RBP26.45■■□□□ 1.82
CDKN2A-203ENST00000380151 CPB2Q96IY4 423 aa26.45■■□□□ 1.82
CDKN2A-203ENST00000380151 GBP3Q9H0R5 595 aa26.45■■□□□ 1.82
CDKN2A-203ENST00000380151 TMC7Q7Z402 723 aa26.44■■□□□ 1.82
CDKN2A-203ENST00000380151 MRPL10Q7Z7H8 261 aaKnown RBP26.44■■□□□ 1.82
CDKN2A-203ENST00000380151 ADHFE1Q8IWW8 467 aa26.44■■□□□ 1.82
CDKN2A-203ENST00000380151 TMX3Q96JJ7 454 aa26.44■■□□□ 1.82
CDKN2A-203ENST00000380151 CDCA3Q99618 268 aaPredicted RBP26.44■■□□□ 1.82
CDKN2A-203ENST00000380151 NRDE2Q9H7Z3 1164 aa26.44■■□□□ 1.82
CDKN2A-203ENST00000380151 RSAD1Q9HA92 442 aa26.44■■□□□ 1.82
CDKN2A-203ENST00000380151 NGRNQ9NPE2 291 aaKnown RBP26.44■■□□□ 1.82
CDKN2A-203ENST00000380151 PRKAG3Q9UGI9 489 aa26.44■■□□□ 1.82
CDKN2A-203ENST00000380151 DBR1Q9UK59 544 aaKnown RBP26.44■■□□□ 1.82
CDKN2A-203ENST00000380151 B4GALT3O60512 393 aa26.43■■□□□ 1.82
CDKN2A-203ENST00000380151 RPA1P27694 616 aa26.43■■□□□ 1.82
CDKN2A-203ENST00000380151 TOB1P50616 345 aaPredicted RBP26.43■■□□□ 1.82
CDKN2A-203ENST00000380151 POU5F1BQ06416 359 aa26.43■■□□□ 1.82
CDKN2A-203ENST00000380151 NOTUMQ6P988 496 aa26.43■■□□□ 1.82
CDKN2A-203ENST00000380151 C4orf32Q8N8J7 132 aa26.43■■□□□ 1.82
CDKN2A-203ENST00000380151 SMRP1Q8NCR6 262 aa26.43■■□□□ 1.82
CDKN2A-203ENST00000380151 URGCPQ8TCY9 931 aa26.43■■□□□ 1.82
CDKN2A-203ENST00000380151 TMEM169Q96HH4 297 aa26.43■■□□□ 1.82
CDKN2A-203ENST00000380151 NACC1Q96RE7 527 aa26.43■■□□□ 1.82
CDKN2A-203ENST00000380151 C1QTNF1Q9BXJ1 281 aa26.43■■□□□ 1.82
CDKN2A-203ENST00000380151 EIF2AQ9BY44 585 aaKnown RBP26.43■■□□□ 1.82
CDKN2A-203ENST00000380151 KIF3AQ9Y496 699 aa26.43■■□□□ 1.82
CDKN2A-203ENST00000380151 CNTNAP2Q9UHC6 1331 aa26.42■■□□□ 1.82
CDKN2A-203ENST00000380151 EYA4O95677 639 aa26.42■■□□□ 1.82
CDKN2A-203ENST00000380151 AXLP30530 894 aa26.42■■□□□ 1.82
CDKN2A-203ENST00000380151 AFF1P51825 1210 aaKnown RBP26.42■■□□□ 1.82
CDKN2A-203ENST00000380151 COASYQ13057 564 aa26.42■■□□□ 1.82
CDKN2A-203ENST00000380151 PCBP1Q15365 356 aaKnown RBP eCLIP26.42■■□□□ 1.82
CDKN2A-203ENST00000380151 AMHR2Q16671 573 aa26.42■■□□□ 1.82
CDKN2A-203ENST00000380151 HAUS3Q68CZ6 603 aa26.42■■□□□ 1.82
CDKN2A-203ENST00000380151 SMG8Q8ND04 991 aaKnown RBP26.42■■□□□ 1.82
CDKN2A-203ENST00000380151 MCPH1Q8NEM0 835 aa26.42■■□□□ 1.82
CDKN2A-203ENST00000380151 BCL7CQ8WUZ0 217 aaPredicted RBP26.42■■□□□ 1.82
CDKN2A-203ENST00000380151 CCDC51Q96ER9 411 aa26.42■■□□□ 1.82
CDKN2A-203ENST00000380151 DNAJB4Q9UDY4 337 aa26.42■■□□□ 1.82
CDKN2A-203ENST00000380151 PCDHB6Q9Y5E3 794 aa26.42■■□□□ 1.82
CDKN2A-203ENST00000380151 C5orf42Q9H799 3197 aa26.41■■□□□ 1.82
CDKN2A-203ENST00000380151 FSD2A1L4K1 749 aa26.41■■□□□ 1.82
CDKN2A-203ENST00000380151 ARHGEF35A5YM69 484 aa26.41■■□□□ 1.82
CDKN2A-203ENST00000380151 LRRIQ4A6NIV6 560 aa26.41■■□□□ 1.82
CDKN2A-203ENST00000380151 B4GALT5O43286 388 aa26.41■■□□□ 1.82
CDKN2A-203ENST00000380151 NCLP19338 710 aaKnown RBP26.41■■□□□ 1.82
CDKN2A-203ENST00000380151 CA8P35219 290 aa26.41■■□□□ 1.82
CDKN2A-203ENST00000380151 FXR2P51116 673 aaKnown RBP eCLIP26.41■■□□□ 1.82
CDKN2A-203ENST00000380151 SMC1AQ14683 1233 aaKnown RBP26.41■■□□□ 1.82
CDKN2A-203ENST00000380151 ZNF280BQ86YH2 543 aa26.41■■□□□ 1.82
CDKN2A-203ENST00000380151 NFKBIZQ9BYH8 718 aa26.41■■□□□ 1.82
CDKN2A-203ENST00000380151 IPPQ9Y573 584 aa26.41■■□□□ 1.82
CDKN2A-203ENST00000380151 GALTP07902 379 aa26.4■■□□□ 1.82
CDKN2A-203ENST00000380151 ARF4P18085 180 aaPredicted RBP26.4■■□□□ 1.82
CDKN2A-203ENST00000380151 CCT6AP40227 531 aaKnown RBP26.4■■□□□ 1.82
CDKN2A-203ENST00000380151 SLC11A1P49279 550 aa26.4■■□□□ 1.82
CDKN2A-203ENST00000380151 NCBP1Q09161 790 aaKnown RBP26.4■■□□□ 1.82
CDKN2A-203ENST00000380151 PTGDRQ13258 359 aa26.4■■□□□ 1.82
CDKN2A-203ENST00000380151 MCTP1Q6DN14 999 aa26.4■■□□□ 1.82
CDKN2A-203ENST00000380151 LLGL2Q6P1M3 1020 aa26.4■■□□□ 1.82
CDKN2A-203ENST00000380151 IGSF21Q96ID5 467 aa26.4■■□□□ 1.82
CDKN2A-203ENST00000380151 TBC1D32Q96NH3 1257 aa26.4■■□□□ 1.82
CDKN2A-203ENST00000380151 CSRNP2Q9H175 543 aa26.4■■□□□ 1.82
CDKN2A-203ENST00000380151 LRWD1Q9UFC0 647 aa26.4■■□□□ 1.82
CDKN2A-203ENST00000380151 USP15Q9Y4E8 981 aaPredicted RBP26.4■■□□□ 1.82
CDKN2A-203ENST00000380151 HES2Q9Y543 173 aa26.4■■□□□ 1.82
CDKN2A-203ENST00000380151 C19orf67A6NJJ6 358 aa26.39■■□□□ 1.82
CDKN2A-203ENST00000380151 POMCP01189 267 aa26.39■■□□□ 1.82
CDKN2A-203ENST00000380151 ITGA4P13612 1032 aa26.39■■□□□ 1.82
CDKN2A-203ENST00000380151 ECM1Q16610 540 aa26.39■■□□□ 1.82
CDKN2A-203ENST00000380151 PADI6Q6TGC4 694 aa26.39■■□□□ 1.82
CDKN2A-203ENST00000380151 CNNM3Q8NE01 707 aa26.39■■□□□ 1.82
CDKN2A-203ENST00000380151 APOL6Q9BWW8 343 aa26.39■■□□□ 1.82
CDKN2A-203ENST00000380151 RNF39Q9H2S5 420 aa26.39■■□□□ 1.82
CDKN2A-203ENST00000380151 C2orf71A6NGG8 1288 aa26.38■■□□□ 1.81
CDKN2A-203ENST00000380151 PI4K2BG5E9Z4 385 aa26.38■■□□□ 1.81
CDKN2A-203ENST00000380151 DDHD2O94830 711 aa26.38■■□□□ 1.81
CDKN2A-203ENST00000380151 SRGAP2BP0DMP2 458 aa26.38■■□□□ 1.81
CDKN2A-203ENST00000380151 COL9A1P20849 921 aa26.38■■□□□ 1.81
CDKN2A-203ENST00000380151 GJB2P29033 226 aa26.38■■□□□ 1.81
CDKN2A-203ENST00000380151 KCNC3Q14003 757 aa26.38■■□□□ 1.81
CDKN2A-203ENST00000380151 CDR2LQ86X02 465 aaPredicted RBP26.38■■□□□ 1.81
CDKN2A-203ENST00000380151 VPS52Q8N1B4 723 aa26.38■■□□□ 1.81
CDKN2A-203ENST00000380151 MRPL43Q8N983 215 aaKnown RBP26.38■■□□□ 1.81
CDKN2A-203ENST00000380151 AUTS2Q8WXX7 1259 aa26.38■■□□□ 1.81
CDKN2A-203ENST00000380151 BSNDQ8WZ55 320 aa26.38■■□□□ 1.81
CDKN2A-203ENST00000380151 POP1Q99575 1024 aaKnown RBP26.38■■□□□ 1.81
CDKN2A-203ENST00000380151 TRIM6Q9C030 488 aaPredicted RBP26.38■■□□□ 1.81
CDKN2A-203ENST00000380151 ZBP1Q9H171 429 aa26.38■■□□□ 1.81
CDKN2A-203ENST00000380151 NXF3Q9H4D5 531 aaKnown RBP26.38■■□□□ 1.81
CDKN2A-203ENST00000380151 CARNS1A5YM72 827 aa26.37■■□□□ 1.81
CDKN2A-203ENST00000380151 FAM86C2PA6NEL3 165 aa26.37■■□□□ 1.81
CDKN2A-203ENST00000380151 MLH1P40692 756 aa26.37■■□□□ 1.81
CDKN2A-203ENST00000380151 CDCA2Q69YH5 1023 aaPredicted RBP26.37■■□□□ 1.81
CDKN2A-203ENST00000380151 SNX29Q8TEQ0 813 aa26.37■■□□□ 1.81
CDKN2A-203ENST00000380151 FAM193BQ96PV7 902 aaPredicted RBP26.37■■□□□ 1.81
CDKN2A-203ENST00000380151 GAD1Q99259 594 aa26.37■■□□□ 1.81
CDKN2A-203ENST00000380151 KANSL3Q9P2N6 904 aa26.37■■□□□ 1.81
CDKN2A-203ENST00000380151 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms