RNA–Protein interactions for RNA: ENST00000380051.6

RPP40-202, Transcript of ribonuclease P/MRP subunit p40, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RPP40, Length 1,483 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-202ENST00000380051 CCDC113Q9H0I3 377 aa16.54■□□□□ 0.24
RPP40-202ENST00000380051 GBP3Q9H0R5 595 aa16.54■□□□□ 0.24
RPP40-202ENST00000380051 SEMA6BQ9H3T3 888 aa16.54■□□□□ 0.24
RPP40-202ENST00000380051 TYW1Q9NV66 732 aaKnown RBP16.54■□□□□ 0.24
RPP40-202ENST00000380051 PRMT7Q9NVM4 692 aaPredicted RBP16.54■□□□□ 0.24
RPP40-202ENST00000380051 CGNQ9P2M7 1197 aaKnown RBP16.54■□□□□ 0.24
RPP40-202ENST00000380051 CTNND2Q9UQB3 1225 aa16.54■□□□□ 0.24
RPP40-202ENST00000380051 TRAF3IP3Q9Y228 551 aa16.54■□□□□ 0.24
RPP40-202ENST00000380051 INO80B-WBP1J3KQ70 363 aa16.53■□□□□ 0.24
RPP40-202ENST00000380051 ACKR2O00590 384 aa16.53■□□□□ 0.24
RPP40-202ENST00000380051 CALUO43852 315 aaPredicted RBP16.53■□□□□ 0.24
RPP40-202ENST00000380051 DARSP14868 501 aaKnown RBP16.53■□□□□ 0.24
RPP40-202ENST00000380051 EN2P19622 333 aaPredicted RBP16.53■□□□□ 0.24
RPP40-202ENST00000380051 EIF4BP23588 611 aaKnown RBP16.53■□□□□ 0.24
RPP40-202ENST00000380051 MBTD1Q05BQ5 628 aa16.53■□□□□ 0.24
RPP40-202ENST00000380051 RBL2Q08999 1139 aa16.53■□□□□ 0.24
RPP40-202ENST00000380051 MGAT3Q09327 533 aa16.53■□□□□ 0.24
RPP40-202ENST00000380051 HS2ST1Q7LGA3 356 aa16.53■□□□□ 0.24
RPP40-202ENST00000380051 PRIMPOLQ96LW4 560 aa16.53■□□□□ 0.24
RPP40-202ENST00000380051 PPP1R16BQ96T49 567 aa16.53■□□□□ 0.24
RPP40-202ENST00000380051 CDHR5Q9HBB8 845 aa16.53■□□□□ 0.24
RPP40-202ENST00000380051 CDY2AQ9Y6F7 541 aa16.53■□□□□ 0.24
RPP40-202ENST00000380051 IKBKBO14920 756 aa16.52■□□□□ 0.23
RPP40-202ENST00000380051 PQBP1O60828 265 aaKnown RBP16.52■□□□□ 0.23
RPP40-202ENST00000380051 PIGRP01833 764 aa16.52■□□□□ 0.23
RPP40-202ENST00000380051 PRKCBP05771 671 aa16.52■□□□□ 0.23
RPP40-202ENST00000380051 STX17P56962 302 aa16.52■□□□□ 0.23
RPP40-202ENST00000380051 BFSP2Q13515 415 aa16.52■□□□□ 0.23
RPP40-202ENST00000380051 IQCB1Q15051 598 aa16.52■□□□□ 0.23
RPP40-202ENST00000380051 EDRF1Q3B7T1 1238 aa16.52■□□□□ 0.23
RPP40-202ENST00000380051 ANKRD40Q6AI12 368 aa16.52■□□□□ 0.23
RPP40-202ENST00000380051 ZPBP2Q6X784 338 aa16.52■□□□□ 0.23
RPP40-202ENST00000380051 GAS2L3Q86XJ1 694 aa16.52■□□□□ 0.23
RPP40-202ENST00000380051 OSMRQ99650 979 aa16.52■□□□□ 0.23
RPP40-202ENST00000380051 MRPL4Q9BYD3 311 aaKnown RBP16.52■□□□□ 0.23
RPP40-202ENST00000380051 CBX8Q9HC52 389 aa16.52■□□□□ 0.23
RPP40-202ENST00000380051 GINS2Q9Y248 185 aa16.52■□□□□ 0.23
RPP40-202ENST00000380051 SQORQ9Y6N5 450 aa16.52■□□□□ 0.23
RPP40-202ENST00000380051 SIP14410 1827 aa16.51■□□□□ 0.23
RPP40-202ENST00000380051 BECN2A8MW95 431 aa16.51■□□□□ 0.23
RPP40-202ENST00000380051 TGFB1I1O43294 461 aa16.51■□□□□ 0.23
RPP40-202ENST00000380051 CHRNA1P02708 482 aa16.51■□□□□ 0.23
RPP40-202ENST00000380051 CKBP12277 381 aa16.51■□□□□ 0.23
RPP40-202ENST00000380051 PMS1P54277 932 aaKnown RBP16.51■□□□□ 0.23
RPP40-202ENST00000380051 MYL5Q02045 173 aa16.51■□□□□ 0.23
RPP40-202ENST00000380051 TLE2Q04725 743 aa16.51■□□□□ 0.23
RPP40-202ENST00000380051 NCBP1Q09161 790 aaKnown RBP16.51■□□□□ 0.23
RPP40-202ENST00000380051 NFIL3Q16649 462 aa16.51■□□□□ 0.23
RPP40-202ENST00000380051 TRIM60Q495X7 471 aa16.51■□□□□ 0.23
RPP40-202ENST00000380051 ZCWPW2Q504Y3 356 aa16.51■□□□□ 0.23
RPP40-202ENST00000380051 SPATA1Q5VX52 437 aa16.51■□□□□ 0.23
RPP40-202ENST00000380051 TTI2Q6NXR4 508 aa16.51■□□□□ 0.23
RPP40-202ENST00000380051 UBE2Q1Q7Z7E8 422 aa16.51■□□□□ 0.23
RPP40-202ENST00000380051 TMEM174Q8WUU8 243 aa16.51■□□□□ 0.23
RPP40-202ENST00000380051 MED15Q96RN5 788 aa16.51■□□□□ 0.23
RPP40-202ENST00000380051 MINDY3Q9H8M7 445 aa16.51■□□□□ 0.23
RPP40-202ENST00000380051 FARP1Q9Y4F1 1045 aaPredicted RBP16.51■□□□□ 0.23
RPP40-202ENST00000380051 ZMYM2Q9UBW7 1377 aa16.5■□□□□ 0.23
RPP40-202ENST00000380051 TRIM49BA6NDI0 452 aa16.5■□□□□ 0.23
RPP40-202ENST00000380051 FGFR1OPO95684 399 aaKnown RBP16.5■□□□□ 0.23
RPP40-202ENST00000380051 IQCF3P0C7M6 154 aa16.5■□□□□ 0.23
RPP40-202ENST00000380051 SFPQP23246 707 aaKnown RBP eCLIP16.5■□□□□ 0.23
RPP40-202ENST00000380051 RPL13P26373 211 aaKnown RBP16.5■□□□□ 0.23
RPP40-202ENST00000380051 LIG4P49917 911 aa16.5■□□□□ 0.23
RPP40-202ENST00000380051 FKBP3Q00688 224 aaKnown RBP16.5■□□□□ 0.23
RPP40-202ENST00000380051 PRPF4BQ13523 1007 aaKnown RBP16.5■□□□□ 0.23
RPP40-202ENST00000380051 MYBPC2Q14324 1141 aa16.5■□□□□ 0.23
RPP40-202ENST00000380051 TPD52L1Q16890 204 aaPredicted RBP16.5■□□□□ 0.23
RPP40-202ENST00000380051 ZNF618Q5T7W0 954 aa16.5■□□□□ 0.23
RPP40-202ENST00000380051 SLFN12LQ6IEE8 588 aa16.5■□□□□ 0.23
RPP40-202ENST00000380051 DHX40Q8IX18 779 aaKnown RBP16.5■□□□□ 0.23
RPP40-202ENST00000380051 BICD1Q96G01 975 aa16.5■□□□□ 0.23
RPP40-202ENST00000380051 GOLGA6L19H0YKK7 550 aa16.49■□□□□ 0.23
RPP40-202ENST00000380051 HNRNPDLO14979 420 aaKnown RBP16.49■□□□□ 0.23
RPP40-202ENST00000380051 ERLIN2O94905 339 aa16.49■□□□□ 0.23
RPP40-202ENST00000380051 CTSHP09668 335 aa16.49■□□□□ 0.23
RPP40-202ENST00000380051 AXLP30530 894 aa16.49■□□□□ 0.23
RPP40-202ENST00000380051 FAAP100Q0VG06 881 aa16.49■□□□□ 0.23
RPP40-202ENST00000380051 NCAPHQ15003 741 aa16.49■□□□□ 0.23
RPP40-202ENST00000380051 AMHR2Q16671 573 aa16.49■□□□□ 0.23
RPP40-202ENST00000380051 COL13A1Q5TAT6 717 aaPredicted RBP16.49■□□□□ 0.23
RPP40-202ENST00000380051 SLC9A9Q8IVB4 645 aa16.49■□□□□ 0.23
RPP40-202ENST00000380051 C12orf56Q8IXR9 622 aa16.49■□□□□ 0.23
RPP40-202ENST00000380051 AOPEPQ8N6M6 819 aa16.49■□□□□ 0.23
RPP40-202ENST00000380051 USP38Q8NB14 1042 aa16.49■□□□□ 0.23
RPP40-202ENST00000380051 NOC3LQ8WTT2 800 aaKnown RBP16.49■□□□□ 0.23
RPP40-202ENST00000380051 TMEM40Q8WWA1 233 aa16.49■□□□□ 0.23
RPP40-202ENST00000380051 ACO2Q99798 780 aaKnown RBP16.49■□□□□ 0.23
RPP40-202ENST00000380051 DUSP9Q99956 384 aaKnown RBP16.49■□□□□ 0.23
RPP40-202ENST00000380051 TARS2Q9BW92 718 aaKnown RBP16.49■□□□□ 0.23
RPP40-202ENST00000380051 RBSNQ9H1K0 784 aa16.49■□□□□ 0.23
RPP40-202ENST00000380051 AGPAT3Q9NRZ7 376 aa16.49■□□□□ 0.23
RPP40-202ENST00000380051 ATP11BQ9Y2G3 1177 aa16.49■□□□□ 0.23
RPP40-202ENST00000380051 STYXL1Q9Y6J8 313 aa16.49■□□□□ 0.23
RPP40-202ENST00000380051 BRCA2P51587 3418 aa16.49■□□□□ 0.23
RPP40-202ENST00000380051 KIAA0391O15091 583 aaKnown RBP16.48■□□□□ 0.23
RPP40-202ENST00000380051 CSDE1O75534 798 aaKnown RBP16.48■□□□□ 0.23
RPP40-202ENST00000380051 SELPP16109 830 aa16.48■□□□□ 0.23
RPP40-202ENST00000380051 GARTP22102 1010 aa16.48■□□□□ 0.23
RPP40-202ENST00000380051 TPM4P67936 248 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms