RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 DLG5Q8TDM6 1919 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 FUOMA2VDF0 154 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 STRNO43815 780 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 TRMUO75648 421 aaKnown RBP9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 CLPTM1O96005 669 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 RCVRNP35243 200 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 PRKCIP41743 596 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 MAP3K10Q02779 954 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 NR1D2Q14995 579 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 MTFR1Q15390 333 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 MEI1Q5TIA1 1274 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 TMTC3Q6ZXV5 915 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 VASH1Q7L8A9 365 aaPredicted RBP9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 ADAT2Q7Z6V5 191 aaKnown RBP9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 VPS36Q86VN1 386 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 NME9Q86XW9 330 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 NELFCDQ8IXH7 590 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 CCDC110Q8TBZ0 833 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 SEMA4AQ9H3S1 761 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 CEP72Q9P209 647 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 ZFP69BQ9UJL9 534 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 TTLL3Q9Y4R7 772 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 HEMK1Q9Y5R4 338 aaPredicted RBP9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 SLC12A7Q9Y666 1083 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 ARHGAP10A1A4S6 786 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 NDC80O14777 642 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 EXOC3O60645 756 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 FGFR4P22455 802 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 NOP14P78316 857 aaKnown RBP9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 LMNB2Q03252 620 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 WASHC5Q12768 1159 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 AUHQ13825 339 aaKnown RBP9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 SHROOM1Q2M3G4 852 aaPredicted RBP9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 CROCCP3Q8IVE0 287 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 ANKRD36BP1Q96IX9 119 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 MIPEPQ99797 713 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 TTYH3Q9C0H2 523 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 CLEC11AQ9Y240 323 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 SNX24Q9Y343 169 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 ABCC1P33527 1531 aa9.08□□□□□ -0.96
NHLRC3-201ENST00000379599 USP1O94782 785 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 FBXO21O94952 628 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 ANXA1P04083 346 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 NUDT17P0C025 328 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 HSPD1P10809 573 aaKnown RBP9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 KLRC1P26715 233 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 POLR2FP61218 127 aaKnown RBP9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 CTDSPL2Q05D32 466 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 CDC16Q13042 620 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 MKRN3Q13064 507 aaKnown RBP9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 PTK7Q13308 1070 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 LONRF1Q17RB8 773 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 RILPL1Q5EBL4 403 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 UBAP2Q5T6F2 1119 aaKnown RBP9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 ACAD11Q709F0 780 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 CSGALNACT2Q8N6G5 542 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 ZNF579Q8NAF0 562 aaKnown RBP9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 CFAP61Q8NHU2 1237 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 SCFD2Q8WU76 684 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 GRAMD1AQ96CP6 724 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 KLHL4Q9C0H6 718 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 CABP5Q9NP86 173 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 PLAGL2Q9UPG8 496 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 TBC1D30Q9Y2I9 924 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 NOC2LQ9Y3T9 749 aaKnown RBP9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 ARIH1Q9Y4X5 557 aaPredicted RBP9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 MST1RQ04912 1400 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 ADGRB1O14514 1584 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 MAP3K15Q6ZN16 1313 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 TULP4Q9NRJ4 1543 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 LRRC53A6NM62 1247 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 BRAFP15056 766 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 RPL5P46777 297 aaKnown RBP9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 PMS1P54277 932 aaKnown RBP9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 NR5A1Q13285 461 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 SPIDRQ14159 915 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 TGFBIQ15582 683 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 ARL13BQ3SXY8 428 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 MMEL1Q495T6 779 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 PPP1R21Q6ZMI0 780 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 BARGINQ6ZT62 677 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 CROCCP2Q86T23 111 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 RNF169Q8NCN4 708 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 PLEKHO2Q8TD55 490 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 UIMC1Q96RL1 719 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 PLGRKTQ9HBL7 147 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 STRN4Q9NRL3 753 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 AIPL1Q9NZN9 384 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 DBF4Q9UBU7 674 aaPredicted RBP9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 CDC42BPGQ6DT37 1551 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 MYO3AQ8NEV4 1616 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 CCDC22O60826 627 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 TBCAO75347 108 aaKnown RBP9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 STT3AP46977 705 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 ACADVLP49748 655 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 ENTPD1P49961 510 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms