RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 ITM2BQ9Y287 266 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 SNCAIPQ9Y6H5 919 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 TMEM110-MUSTN1A8MSY1 372 aa11.71□□□□□ -0.53
NEDD9-201ENST00000379433 POTEB2H3BUK9 544 aa11.71□□□□□ -0.53
NEDD9-201ENST00000379433 ACTR2P61160 394 aa11.71□□□□□ -0.53
NEDD9-201ENST00000379433 PRKCEQ02156 737 aa11.71□□□□□ -0.53
NEDD9-201ENST00000379433 MAPK7Q13164 816 aa11.71□□□□□ -0.53
NEDD9-201ENST00000379433 STXBP4Q6ZWJ1 553 aa11.71□□□□□ -0.53
NEDD9-201ENST00000379433 TSPYL2Q9H2G4 693 aaPredicted RBP11.71□□□□□ -0.53
NEDD9-201ENST00000379433 UBE2TQ9NPD8 197 aaPredicted RBP11.71□□□□□ -0.53
NEDD9-201ENST00000379433 SUN2Q9UH99 717 aa11.71□□□□□ -0.53
NEDD9-201ENST00000379433 TRAF3IP3Q9Y228 551 aa11.71□□□□□ -0.53
NEDD9-201ENST00000379433 MYH11P35749 1972 aa11.71□□□□□ -0.53
NEDD9-201ENST00000379433 ZMYM2Q9UBW7 1377 aa11.71□□□□□ -0.53
NEDD9-201ENST00000379433 FRMPD4Q14CM0 1322 aa11.71□□□□□ -0.53
NEDD9-201ENST00000379433 DYTNA2CJ06 578 aa11.71□□□□□ -0.53
NEDD9-201ENST00000379433 ANKRD63C9JTQ0 380 aa11.71□□□□□ -0.53
NEDD9-201ENST00000379433 CA8P35219 290 aa11.71□□□□□ -0.53
NEDD9-201ENST00000379433 POLGP54098 1239 aaPredicted RBP11.71□□□□□ -0.53
NEDD9-201ENST00000379433 DMP1Q13316 513 aaPredicted RBP11.71□□□□□ -0.53
NEDD9-201ENST00000379433 KLHDC7AQ5VTJ3 777 aa11.71□□□□□ -0.53
NEDD9-201ENST00000379433 IQCEQ6IPM2 695 aa11.71□□□□□ -0.53
NEDD9-201ENST00000379433 EPM2AIP1Q7L775 607 aaPredicted RBP11.71□□□□□ -0.53
NEDD9-201ENST00000379433 ZNF571Q7Z3V5 609 aaPredicted RBP11.71□□□□□ -0.53
NEDD9-201ENST00000379433 CCDC170Q8IYT3 715 aa11.71□□□□□ -0.53
NEDD9-201ENST00000379433 BSNDQ8WZ55 320 aa11.71□□□□□ -0.53
NEDD9-201ENST00000379433 TCHPQ9BT92 498 aa11.71□□□□□ -0.53
NEDD9-201ENST00000379433 ZCCHC17Q9NP64 241 aaKnown RBP11.71□□□□□ -0.53
NEDD9-201ENST00000379433 SLC9A2Q9UBY0 812 aa11.71□□□□□ -0.53
NEDD9-201ENST00000379433 DNAJC12Q9UKB3 198 aa11.71□□□□□ -0.53
NEDD9-201ENST00000379433 GINS2Q9Y248 185 aa11.71□□□□□ -0.53
NEDD9-201ENST00000379433 AFG3L2Q9Y4W6 797 aa11.71□□□□□ -0.53
NEDD9-201ENST00000379433 PALMO75781 387 aa11.71□□□□□ -0.54
NEDD9-201ENST00000379433 OSTNP61366 133 aa11.71□□□□□ -0.54
NEDD9-201ENST00000379433 PSMC1P62191 440 aaKnown RBP11.71□□□□□ -0.54
NEDD9-201ENST00000379433 MYL7Q01449 175 aa11.71□□□□□ -0.54
NEDD9-201ENST00000379433 PRPF4BQ13523 1007 aaKnown RBP11.71□□□□□ -0.54
NEDD9-201ENST00000379433 DRAP1Q14919 205 aaPredicted RBP11.71□□□□□ -0.54
NEDD9-201ENST00000379433 EPC2Q52LR7 807 aa11.71□□□□□ -0.54
NEDD9-201ENST00000379433 HGSNATQ68CP4 663 aa11.71□□□□□ -0.54
NEDD9-201ENST00000379433 DPY19L2Q6NUT2 758 aa11.71□□□□□ -0.54
NEDD9-201ENST00000379433 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.71□□□□□ -0.54
NEDD9-201ENST00000379433 RSPH9Q9H1X1 276 aaPredicted RBP11.71□□□□□ -0.54
NEDD9-201ENST00000379433 OLFML3Q9NRN5 406 aa11.71□□□□□ -0.54
NEDD9-201ENST00000379433 CFAP69A5D8W1 941 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 PDE2AO00408 941 aaPredicted RBP11.7□□□□□ -0.54
NEDD9-201ENST00000379433 NPTX2P47972 431 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 FMO5P49326 533 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 ACOT2P49753 483 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 CDR1P51861 262 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 SWT1Q5T5J6 900 aaKnown RBP11.7□□□□□ -0.54
NEDD9-201ENST00000379433 FIZ1Q96SL8 496 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 MOV10L1Q9BXT6 1211 aaKnown RBP11.7□□□□□ -0.54
NEDD9-201ENST00000379433 HSPBP1Q9NZL4 362 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 SERPING1P05155 500 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 GJB1P08034 283 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 SRGAP2CP0DJJ0 459 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 SMTNP53814 917 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 BMS1Q14692 1282 aaKnown RBP11.7□□□□□ -0.54
NEDD9-201ENST00000379433 Q3C1V9 767 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 C2CD6Q53TS8 623 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 PPP4R3CPQ6ZMV5 832 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 FRMD5Q7Z6J6 570 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 COPS5Q92905 334 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 ALS2CR12Q96Q35 445 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 FAM213AQ9BRX8 229 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 TXNRD2Q9NNW7 524 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 FAM184BQ9ULE4 1060 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 PLA2G6O60733 806 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 FAM163BP0C2L3 166 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 PPP3CAQ08209 521 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 STXBP2Q15833 593 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 SKIDA1Q1XH10 827 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 C11orf91Q3C1V1 193 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 GNPTABQ3T906 1256 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 COBLL1Q53SF7 1204 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 ALKBH5Q6P6C2 394 aaKnown RBP11.7□□□□□ -0.54
NEDD9-201ENST00000379433 LRRC71Q8N4P6 559 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 CEP112Q8N8E3 955 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 TRAPPC12Q8WVT3 735 aa11.7□□□□□ -0.54
NEDD9-201ENST00000379433 ADARB2Q9NS39 739 aaKnown RBP11.7□□□□□ -0.54
NEDD9-201ENST00000379433 C19orf81C9J6K1 198 aa11.69□□□□□ -0.54
NEDD9-201ENST00000379433 EVI5O60447 810 aa11.69□□□□□ -0.54
NEDD9-201ENST00000379433 PPFIA2O75334 1257 aa11.69□□□□□ -0.54
NEDD9-201ENST00000379433 TUBB4AP04350 444 aa11.69□□□□□ -0.54
NEDD9-201ENST00000379433 PLS3P13797 630 aa11.69□□□□□ -0.54
NEDD9-201ENST00000379433 NF2P35240 595 aa11.69□□□□□ -0.54
NEDD9-201ENST00000379433 MKRN4PQ13434 485 aaPredicted RBP11.69□□□□□ -0.54
NEDD9-201ENST00000379433 MAP9Q49MG5 647 aa11.69□□□□□ -0.54
NEDD9-201ENST00000379433 NAA35Q5VZE5 725 aa11.69□□□□□ -0.54
NEDD9-201ENST00000379433 FBXO16Q8IX29 292 aaPredicted RBP11.69□□□□□ -0.54
NEDD9-201ENST00000379433 IQCF2Q8IXL9 164 aa11.69□□□□□ -0.54
NEDD9-201ENST00000379433 OPTNQ96CV9 577 aa11.69□□□□□ -0.54
NEDD9-201ENST00000379433 ZBTB45Q96K62 511 aaPredicted RBP11.69□□□□□ -0.54
NEDD9-201ENST00000379433 G3BP2Q9UN86 482 aaKnown RBP11.69□□□□□ -0.54
NEDD9-201ENST00000379433 A0A1W2PQJ5 194 aa11.69□□□□□ -0.54
NEDD9-201ENST00000379433 CNGA1P29973 690 aa11.69□□□□□ -0.54
NEDD9-201ENST00000379433 IREB2P48200 963 aaKnown RBP11.69□□□□□ -0.54
NEDD9-201ENST00000379433 VSNL1P62760 191 aa11.69□□□□□ -0.54
NEDD9-201ENST00000379433 KRT76Q01546 638 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms