RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 NFKBIZQ9BYH8 718 aa12.91□□□□□ -0.34
DEPDC4-202ENST00000378244 LRRC27Q9C0I9 530 aa12.91□□□□□ -0.34
DEPDC4-202ENST00000378244 C2orf40Q9H1Z8 148 aa12.91□□□□□ -0.34
DEPDC4-202ENST00000378244 TSPYL2Q9H2G4 693 aaPredicted RBP12.91□□□□□ -0.34
DEPDC4-202ENST00000378244 AGPAT5Q9NUQ2 364 aa12.91□□□□□ -0.34
DEPDC4-202ENST00000378244 DACT1Q9NYF0 836 aa12.91□□□□□ -0.34
DEPDC4-202ENST00000378244 CHD9Q3L8U1 2897 aa12.91□□□□□ -0.34
DEPDC4-202ENST00000378244 AMHP03971 560 aa12.9□□□□□ -0.34
DEPDC4-202ENST00000378244 MYOGP15173 224 aa12.9□□□□□ -0.34
DEPDC4-202ENST00000378244 EFNA5P52803 228 aa12.9□□□□□ -0.34
DEPDC4-202ENST00000378244 TAS1R3Q7RTX0 852 aa12.9□□□□□ -0.34
DEPDC4-202ENST00000378244 IFNLR1Q8IU57 520 aaPredicted RBP12.9□□□□□ -0.34
DEPDC4-202ENST00000378244 GLIS3Q8NEA6 775 aa12.9□□□□□ -0.34
DEPDC4-202ENST00000378244 NTPCRQ9BSD7 190 aaKnown RBP12.9□□□□□ -0.34
DEPDC4-202ENST00000378244 FGFBP2Q9BYJ0 223 aa12.9□□□□□ -0.34
DEPDC4-202ENST00000378244 IKZF4Q9H2S9 585 aa12.9□□□□□ -0.34
DEPDC4-202ENST00000378244 FZD8Q9H461 694 aa12.9□□□□□ -0.34
DEPDC4-202ENST00000378244 ARHGAP28Q9P2N2 729 aa12.9□□□□□ -0.34
DEPDC4-202ENST00000378244 PBX2P40425 430 aa12.9□□□□□ -0.34
DEPDC4-202ENST00000378244 STRN3Q13033 797 aa12.9□□□□□ -0.34
DEPDC4-202ENST00000378244 RASIP1Q5U651 963 aa12.9□□□□□ -0.34
DEPDC4-202ENST00000378244 SLC24A5Q71RS6 500 aa12.9□□□□□ -0.34
DEPDC4-202ENST00000378244 CCDC65Q8IXS2 484 aa12.9□□□□□ -0.34
DEPDC4-202ENST00000378244 SPIRE2Q8WWL2 714 aa12.9□□□□□ -0.34
DEPDC4-202ENST00000378244 C7orf25Q9BPX7 421 aa12.9□□□□□ -0.34
DEPDC4-202ENST00000378244 TARS2Q9BW92 718 aaKnown RBP12.9□□□□□ -0.34
DEPDC4-202ENST00000378244 EIF2AQ9BY44 585 aaKnown RBP12.9□□□□□ -0.34
DEPDC4-202ENST00000378244 CCDC113Q9H0I3 377 aa12.9□□□□□ -0.34
DEPDC4-202ENST00000378244 MAGEF1Q9HAY2 307 aa12.9□□□□□ -0.34
DEPDC4-202ENST00000378244 PRMT7Q9NVM4 692 aaPredicted RBP12.9□□□□□ -0.34
DEPDC4-202ENST00000378244 HES2Q9Y543 173 aa12.9□□□□□ -0.34
DEPDC4-202ENST00000378244 ACKR2O00590 384 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 KINO60870 393 aaKnown RBP12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 EFCAB14O75071 495 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 GCNT3O95395 438 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 CASP5P51878 434 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 KCNA1Q09470 495 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 COASYQ13057 564 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 PNOCQ13519 176 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 CLEC17AQ6ZS10 378 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 LPPQ93052 612 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 FIZ1Q96SL8 496 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 TCHPQ9BT92 498 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 RGS18Q9NS28 235 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 USP25Q9UHP3 1055 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 MEIS3P2A8K0S8 358 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 C9IYK1 514 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 MAPTP10636 758 aaKnown RBP12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 HARSP12081 509 aaKnown RBP12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 GATMP50440 423 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 NCKAP1LP55160 1127 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 DSC3Q14574 896 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 CAMK4Q16566 473 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 NOTUMQ6P988 496 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 ZNF720Q7Z2F6 126 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 HERC6Q8IVU3 1022 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 TOP1MTQ969P6 601 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 BICD1Q96G01 975 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 APOL6Q9BWW8 343 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 TRIM6Q9C030 488 aaPredicted RBP12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 LMBRD1Q9NUN5 540 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 ANKFY1Q9P2R3 1169 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 LRFN2Q9ULH4 789 aa12.89□□□□□ -0.35
DEPDC4-202ENST00000378244 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 TLL1O43897 1013 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 GJB5O95377 273 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 MYBP10242 640 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 FGFR1P11362 822 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 GAP43P17677 238 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 POSTNQ15063 836 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 NT5DC1Q5TFE4 455 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 EEF1DP3Q658K8 133 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 ZBTB33Q86T24 672 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 ZBTB45Q96K62 511 aaPredicted RBP12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 SLC39A2Q9NP94 309 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 CHST12Q9NRB3 414 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 FAM105AQ9NUU6 356 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 PCDHB7Q9Y5E2 793 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 PCDHB2Q9Y5E7 798 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 A0A0U1RQF3 1178 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 A0A1B0GUA9 196 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 FRMD3A2A2Y4 597 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 TISP43B9A030 160 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 GOLGA6L22H0YM25 854 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 SOX1O00570 391 aaPredicted RBP12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 HNRNPDLO14979 420 aaKnown RBP12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 NPTXRO95502 500 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 PAN2Q504Q3 1202 aaKnown RBP12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 ATF7IP2Q5U623 682 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 UNC13DQ70J99 1090 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 LRCH3Q96II8 777 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 PRIMPOLQ96LW4 560 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 SLC9A7Q96T83 725 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 YME1L1Q96TA2 773 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 PBX4Q9BYU1 374 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 RNF19AQ9NV58 838 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 KCNG1Q9UIX4 513 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 TBX20Q9UMR3 447 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 PHLPP2Q6ZVD8 1323 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms