RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 SLC10A4Q96EP9 437 aa15.84■□□□□ 0.13
EXT1-201ENST00000378204 PPP1R16BQ96T49 567 aa15.84■□□□□ 0.13
EXT1-201ENST00000378204 NCAPD2Q15021 1401 aa15.84■□□□□ 0.13
EXT1-201ENST00000378204 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.84■□□□□ 0.13
EXT1-201ENST00000378204 DAB2P98082 770 aa15.84■□□□□ 0.13
EXT1-201ENST00000378204 HOXC10Q9NYD6 342 aa15.84■□□□□ 0.13
EXT1-201ENST00000378204 DKK3Q9UBP4 350 aa15.84■□□□□ 0.13
EXT1-201ENST00000378204 SNX5Q9Y5X3 404 aa15.84■□□□□ 0.13
EXT1-201ENST00000378204 RNF219Q5W0B1 726 aaPredicted RBP15.84■□□□□ 0.13
EXT1-201ENST00000378204 LRRC31Q6UY01 552 aa15.84■□□□□ 0.13
EXT1-201ENST00000378204 TUBGCP3Q96CW5 907 aa15.84■□□□□ 0.13
EXT1-201ENST00000378204 FAM49AQ9H0Q0 323 aaPredicted RBP15.84■□□□□ 0.13
EXT1-201ENST00000378204 ANO9A1A5B4 782 aa15.84■□□□□ 0.13
EXT1-201ENST00000378204 GTPBP10A4D1E9 387 aaKnown RBP15.84■□□□□ 0.13
EXT1-201ENST00000378204 DMPKQ09013 629 aa15.84■□□□□ 0.13
EXT1-201ENST00000378204 ZNF394Q53GI3 561 aa15.84■□□□□ 0.13
EXT1-201ENST00000378204 NAIF1Q69YI7 327 aaPredicted RBP15.84■□□□□ 0.13
EXT1-201ENST00000378204 CIAPIN1Q6FI81 312 aa15.84■□□□□ 0.13
EXT1-201ENST00000378204 SIRT2Q8IXJ6 389 aa15.84■□□□□ 0.13
EXT1-201ENST00000378204 EXT2Q93063 718 aa15.84■□□□□ 0.13
EXT1-201ENST00000378204 THOC1Q96FV9 657 aaKnown RBP15.84■□□□□ 0.13
EXT1-201ENST00000378204 KNOP1Q1ED39 458 aaKnown RBP15.83■□□□□ 0.13
EXT1-201ENST00000378204 TMEM270Q6UE05 265 aa15.83■□□□□ 0.13
EXT1-201ENST00000378204 HDDC2Q7Z4H3 204 aa15.83■□□□□ 0.13
EXT1-201ENST00000378204 SH3RF3Q8TEJ3 882 aaPredicted RBP15.83■□□□□ 0.13
EXT1-201ENST00000378204 ZNF483Q8TF39 744 aaPredicted RBP15.83■□□□□ 0.13
EXT1-201ENST00000378204 SNX19Q92543 992 aa15.83■□□□□ 0.13
EXT1-201ENST00000378204 NFX1Q12986 1120 aaKnown RBP15.83■□□□□ 0.13
EXT1-201ENST00000378204 ZNF568Q3ZCX4 644 aa15.83■□□□□ 0.13
EXT1-201ENST00000378204 TMEM259Q4ZIN3 620 aa15.83■□□□□ 0.13
EXT1-201ENST00000378204 DALRD3Q5D0E6 543 aaKnown RBP15.83■□□□□ 0.13
EXT1-201ENST00000378204 FBXO40Q9UH90 709 aa15.83■□□□□ 0.13
EXT1-201ENST00000378204 TEKT2Q9UIF3 430 aa15.83■□□□□ 0.13
EXT1-201ENST00000378204 UBE4BO95155 1302 aa15.83■□□□□ 0.12
EXT1-201ENST00000378204 HUS1O60921 280 aa15.83■□□□□ 0.12
EXT1-201ENST00000378204 AP1B1Q10567 949 aa15.83■□□□□ 0.12
EXT1-201ENST00000378204 PPP1R18Q6NYC8 613 aa15.83■□□□□ 0.12
EXT1-201ENST00000378204 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.83■□□□□ 0.12
EXT1-201ENST00000378204 ZNF189O75820 626 aaPredicted RBP15.83■□□□□ 0.12
EXT1-201ENST00000378204 NANOGNBQ7Z5D8 188 aa15.83■□□□□ 0.12
EXT1-201ENST00000378204 PASD1Q8IV76 773 aa15.83■□□□□ 0.12
EXT1-201ENST00000378204 TTC8Q8TAM2 541 aa15.83■□□□□ 0.12
EXT1-201ENST00000378204 GCOM2Q9BZD3 368 aaPredicted RBP15.83■□□□□ 0.12
EXT1-201ENST00000378204 ABCF3Q9NUQ8 709 aa15.83■□□□□ 0.12
EXT1-201ENST00000378204 SNX24Q9Y343 169 aa15.83■□□□□ 0.12
EXT1-201ENST00000378204 CROCC2H7BZ55 1655 aa15.83■□□□□ 0.12
EXT1-201ENST00000378204 E2F6O75461 281 aa15.83■□□□□ 0.12
EXT1-201ENST00000378204 RAD23BP54727 409 aa15.83■□□□□ 0.12
EXT1-201ENST00000378204 SLC27A3Q5K4L6 730 aa15.83■□□□□ 0.12
EXT1-201ENST00000378204 OLFML1Q6UWY5 402 aa15.83■□□□□ 0.12
EXT1-201ENST00000378204 ING2Q9H160 280 aa15.83■□□□□ 0.12
EXT1-201ENST00000378204 SLITRK6Q9H5Y7 841 aa15.83■□□□□ 0.12
EXT1-201ENST00000378204 FEM1BQ9UK73 627 aa15.83■□□□□ 0.12
EXT1-201ENST00000378204 CAB39Q9Y376 341 aaPredicted RBP15.83■□□□□ 0.12
EXT1-201ENST00000378204 TRIM72Q6ZMU5 477 aa15.83■□□□□ 0.12
EXT1-201ENST00000378204 THNSL1Q8IYQ7 743 aa15.83■□□□□ 0.12
EXT1-201ENST00000378204 IFT43Q96FT9 208 aa15.83■□□□□ 0.12
EXT1-201ENST00000378204 MRPS26Q9BYN8 205 aaKnown RBP15.83■□□□□ 0.12
EXT1-201ENST00000378204 ZNF521Q96K83 1311 aa15.83■□□□□ 0.12
EXT1-201ENST00000378204 PDE5AO76074 875 aa15.83■□□□□ 0.12
EXT1-201ENST00000378204 SERPINB3P29508 390 aa15.83■□□□□ 0.12
EXT1-201ENST00000378204 GCLMP48507 274 aa15.83■□□□□ 0.12
EXT1-201ENST00000378204 ASCC2Q9H1I8 757 aaPredicted RBP15.83■□□□□ 0.12
EXT1-201ENST00000378204 GMEB1Q9Y692 573 aa15.83■□□□□ 0.12
EXT1-201ENST00000378204 POTEMA6NI47 508 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 SLC10A5Q5PT55 438 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 TEX12Q9BXU0 123 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 ARHGAP26Q9UNA1 814 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 PVALEFA0A1B0GWK0 134 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 KIAA1755Q5JYT7 1200 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 PADI6Q6TGC4 694 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 TTC39CQ8N584 583 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 TTLL6Q8N841 843 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 CATSPER1Q8NEC5 780 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 PIGBQ92521 554 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 ALKBH8Q96BT7 664 aaKnown RBP15.82■□□□□ 0.12
EXT1-201ENST00000378204 SPATA17Q96L03 361 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 METP08581 1390 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 BNIP3LO60238 219 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 VAMP7P51809 220 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 KRT76Q01546 638 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 CAPRIN1Q14444 709 aaKnown RBP15.82■□□□□ 0.12
EXT1-201ENST00000378204 SYBUQ9NX95 663 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 MYO3BQ8WXR4 1341 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 CPSF1Q10570 1443 aaKnown RBP15.82■□□□□ 0.12
EXT1-201ENST00000378204 ARHGAP22Q7Z5H3 698 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 DEFA1P59665 94 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 DEFA3P59666 94 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 ST13P5Q8NFI4 369 aaPredicted RBP15.82■□□□□ 0.12
EXT1-201ENST00000378204 BEST2Q8NFU1 509 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 NCLNQ969V3 563 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 IMPG1Q17R60 797 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 NUP85Q9BW27 656 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 WNT8AQ9H1J5 351 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 NDE1Q9NXR1 346 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 RWDD3Q9Y3V2 267 aa15.82■□□□□ 0.12
EXT1-201ENST00000378204 TSPY1Q01534 308 aa15.81■□□□□ 0.12
EXT1-201ENST00000378204 SUSD4Q5VX71 490 aa15.81■□□□□ 0.12
EXT1-201ENST00000378204 ENOSF1Q7L5Y1 443 aa15.81■□□□□ 0.12
EXT1-201ENST00000378204 INPP5FQ9Y2H2 1132 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms