RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 HELQQ8TDG4 1101 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 ZFP91Q96JP5 570 aaPredicted RBP5.26□□□□□ -1.57
PCDH9-201ENST00000377861 CYLDQ9NQC7 956 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 H0YIN7 160 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 DGAT1O75907 488 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 ANKS1BQ7Z6G8 1248 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 GOLM1Q8NBJ4 401 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 ITM2BQ9Y287 266 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 H0Y626 953 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 MEIS1O00470 390 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 FKBP9O95302 570 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 TRIM16O95361 564 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 SERPINB10P48595 397 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 ZFRQ96KR1 1074 aaKnown RBP5.26□□□□□ -1.57
PCDH9-201ENST00000377861 MTMR12Q9C0I1 747 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 NARFQ9UHQ1 456 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 CHEK2O96017 543 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 THRAP10827 490 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 ARL13BQ3SXY8 428 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 BIRC5O15392 142 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 PSMC5P62195 406 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 NSUN6Q8TEA1 469 aaKnown RBP5.26□□□□□ -1.57
PCDH9-201ENST00000377861 SEZ6LQ9BYH1 1024 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 KIAA1024Q9UPX6 916 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 PSAPP07602 524 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 BMP3P12645 472 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 POU5F1BQ06416 359 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 RASGRF1Q13972 1273 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 VAT1Q99536 393 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 VTI1BQ9UEU0 232 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 DNAJB5O75953 348 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 SDCCAG3Q96C92 435 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 CIDEBQ9UHD4 219 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 C11orf63Q6NUN7 778 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 SLC30A9Q6PML9 568 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 REXO1L1PQ8IX06 675 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 PHF2O75151 1096 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 C1QBPQ07021 282 aaKnown RBP5.26□□□□□ -1.57
PCDH9-201ENST00000377861 NCLNQ969V3 563 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 TLK1Q9UKI8 766 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 EXD1Q8NHP7 514 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 DNAJB8Q8NHS0 232 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 SLC12A2P55011 1212 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 TRIM59Q8IWR1 403 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 PCYOX1LQ8NBM8 494 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 CALML6Q8TD86 181 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 SYNDIG1Q9H7V2 258 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 LRMPQ12912 555 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 NSFL1CQ9UNZ2 370 aaKnown RBP5.26□□□□□ -1.57
PCDH9-201ENST00000377861 SHOC2Q9UQ13 582 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 SHOX2O60902 331 aaPredicted RBP5.26□□□□□ -1.57
PCDH9-201ENST00000377861 TTI2Q6NXR4 508 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 TSPAN17Q96FV3 270 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 TECP42680 631 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 XKR3Q5GH77 459 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 ERICH1Q86X53 443 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 PHKBQ93100 1093 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 CAPN6Q9Y6Q1 641 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 SENP3-EIF4A1A0A087X0R7 540 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 WFS1O76024 890 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 CD2BP2O95400 341 aaKnown RBP5.26□□□□□ -1.57
PCDH9-201ENST00000377861 ESRRAP11474 423 aaPredicted RBP5.26□□□□□ -1.57
PCDH9-201ENST00000377861 SOX5P35711 763 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 KPNA1P52294 538 aaPredicted RBP5.26□□□□□ -1.57
PCDH9-201ENST00000377861 PDK2Q15119 407 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 RARS2Q5T160 578 aaKnown RBP5.26□□□□□ -1.57
PCDH9-201ENST00000377861 C12orf56Q8IXR9 622 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 H0YJX3 145 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 SNRPAP09012 282 aaKnown RBP5.25□□□□□ -1.57
PCDH9-201ENST00000377861 GPBP1Q86WP2 473 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 TBCKQ8TEA7 893 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 JARID2Q92833 1246 aaPredicted RBP5.25□□□□□ -1.57
PCDH9-201ENST00000377861 MTMR4Q9NYA4 1195 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 MMEP08473 750 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 RFC5P40937 340 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 AIF1P55008 147 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 COPZ1P61923 177 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 RAD51AP2Q09MP3 1159 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 CYLC2Q14093 348 aaPredicted RBP5.25□□□□□ -1.57
PCDH9-201ENST00000377861 STK38LQ9Y2H1 464 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 USP20Q9Y2K6 914 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 KDM6AO15550 1401 aaPredicted RBP5.25□□□□□ -1.57
PCDH9-201ENST00000377861 ZNF487B1APH4 448 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 K7ERI5 159 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 PSTPIP1O43586 416 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 STAT2P52630 851 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 STRIP1Q5VSL9 837 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 RSPH3Q86UC2 560 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 FBXL13Q8NEE6 735 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 PAEPP09466 180 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 SERPINB8P50452 374 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 DCP1AQ9NPI6 582 aaPredicted RBP5.25□□□□□ -1.57
PCDH9-201ENST00000377861 NAGPAQ9UK23 515 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 BNC1Q01954 994 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 ADPGKQ9BRR6 497 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 EIF4BP23588 611 aaKnown RBP5.25□□□□□ -1.57
PCDH9-201ENST00000377861 OXCT2Q9BYC2 517 aaPredicted RBP5.25□□□□□ -1.57
PCDH9-201ENST00000377861 MAGEB18Q96M61 343 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 CHMP2BQ9UQN3 213 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 TTC23LQ6PF05 361 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms