RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 PTPN22Q9Y2R2 807 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 ALAS1P13196 640 aa16.83■□□□□ 0.28
CSNK1A1-202ENST00000377843 SCNN1BP51168 640 aa16.83■□□□□ 0.28
CSNK1A1-202ENST00000377843 CACNA2D1P54289 1103 aa16.83■□□□□ 0.28
CSNK1A1-202ENST00000377843 JAM2P57087 298 aa16.83■□□□□ 0.28
CSNK1A1-202ENST00000377843 EXOC3L4Q17RC7 722 aa16.83■□□□□ 0.28
CSNK1A1-202ENST00000377843 WASHC2DQ5SRD0 308 aa16.83■□□□□ 0.28
CSNK1A1-202ENST00000377843 KRT25Q7Z3Z0 450 aa16.83■□□□□ 0.28
CSNK1A1-202ENST00000377843 GLYCTKQ8IVS8 523 aa16.83■□□□□ 0.28
CSNK1A1-202ENST00000377843 MAGEB18Q96M61 343 aa16.83■□□□□ 0.28
CSNK1A1-202ENST00000377843 ROPN1BQ9BZX4 212 aaPredicted RBP16.83■□□□□ 0.28
CSNK1A1-202ENST00000377843 ROPN1Q9HAT0 212 aaPredicted RBP16.83■□□□□ 0.28
CSNK1A1-202ENST00000377843 SCOCQ9UIL1 159 aa16.83■□□□□ 0.28
CSNK1A1-202ENST00000377843 PITPNM2Q9BZ72 1349 aa16.83■□□□□ 0.28
CSNK1A1-202ENST00000377843 GFPT2O94808 682 aa16.83■□□□□ 0.28
CSNK1A1-202ENST00000377843 GNA14O95837 355 aa16.83■□□□□ 0.28
CSNK1A1-202ENST00000377843 CYP1A1P04798 512 aaPredicted RBP16.83■□□□□ 0.28
CSNK1A1-202ENST00000377843 NAPAP54920 295 aa16.83■□□□□ 0.28
CSNK1A1-202ENST00000377843 TMEM119Q4V9L6 283 aa16.83■□□□□ 0.28
CSNK1A1-202ENST00000377843 MIGA2Q7L4E1 593 aa16.83■□□□□ 0.28
CSNK1A1-202ENST00000377843 SLC30A5Q8TAD4 765 aa16.83■□□□□ 0.28
CSNK1A1-202ENST00000377843 PITPNM3Q9BZ71 974 aa16.83■□□□□ 0.28
CSNK1A1-202ENST00000377843 DCP1AQ9NPI6 582 aaPredicted RBP16.83■□□□□ 0.28
CSNK1A1-202ENST00000377843 ARPP21Q9UBL0 812 aaPredicted RBP16.83■□□□□ 0.28
CSNK1A1-202ENST00000377843 BIN2Q9UBW5 565 aaPredicted RBP16.83■□□□□ 0.28
CSNK1A1-202ENST00000377843 LRCH1Q9Y2L9 728 aa16.83■□□□□ 0.28
CSNK1A1-202ENST00000377843 TNS2Q63HR2 1409 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 SMCO2A6NFE2 343 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 TDP2O95551 362 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 KCNA3P22001 575 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 GYG1P46976 350 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 KCNJ1P48048 391 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 SERPINB4P48594 390 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 CTTNQ14247 550 aaKnown RBP16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 CCDC152Q4G0S7 254 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 HHATQ5VTY9 493 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 CERKQ8TCT0 537 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 RFFLQ8WZ73 363 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 INPP5DQ92835 1189 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 AZIN2Q96A70 460 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 DNAJC17Q9NVM6 304 aaKnown RBP16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 TAS2R14Q9NYV8 317 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 INTUQ9ULD6 942 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 NUMBLQ9Y6R0 609 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 NCANO14594 1321 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 EYA4O95677 639 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 GSTT1P30711 240 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 CHKAP35790 457 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 YARSP54577 528 aaKnown RBP16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 GIT2Q14161 759 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 PPP2R5EQ16537 467 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 CALCRLQ16602 461 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 CERKLQ49MI3 558 aaPredicted RBP16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 PABPC1LQ4VXU2 614 aaKnown RBP16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 SNX30Q5VWJ9 437 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 CCDC137Q6PK04 289 aaKnown RBP16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 ZC3H3Q8IXZ2 948 aaKnown RBP16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 SCG3Q8WXD2 468 aaKnown RBP16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 SERPINB12Q96P63 405 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 MIPEPQ99797 713 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 PCYOX1Q9UHG3 505 aa16.82■□□□□ 0.28
CSNK1A1-202ENST00000377843 MROH7Q68CQ1 1323 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 CACNA1SQ13698 1873 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 MYH3P11055 1940 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 USP17L3A6NCW0 530 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 USP17L4A6NCW7 530 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 COQ9O75208 318 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 FXR2P51116 673 aaKnown RBP eCLIP16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 WDR4P57081 412 aaKnown RBP16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 TFAP4Q01664 338 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 MKRN3Q13064 507 aaKnown RBP16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 EPHA7Q15375 998 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 DSTYKQ6XUX3 929 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 USP17L1Q7RTZ2 530 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 LRRC8CQ8TDW0 803 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 DDX50Q9BQ39 737 aaKnown RBP16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 NT5C3AQ9H0P0 336 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 SLCO1B3Q9NPD5 702 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 USP40Q9NVE5 1235 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 TBK1Q9UHD2 729 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 TJP3O95049 919 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 SPATA31D3P0C874 917 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 CTNNA2P26232 953 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 CHRNA3P32297 505 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 VHLP40337 213 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 BICDL1Q6ZP65 573 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 SPATA31D4Q6ZUB0 917 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 ZC3H18Q86VM9 953 aaKnown RBP16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 NCAPG2Q86XI2 1143 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 PALB2Q86YC2 1186 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 KSR1Q8IVT5 923 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 GATA6Q92908 595 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 LRRC37BQ96QE4 947 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 NDNQ99608 321 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 DCLRE1BQ9H816 532 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 USP21Q9UK80 565 aa16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 DIS3Q9Y2L1 958 aaKnown RBP16.81■□□□□ 0.28
CSNK1A1-202ENST00000377843 ATP8B3O60423 1300 aa16.8■□□□□ 0.28
CSNK1A1-202ENST00000377843 ECE2O60344 883 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms