RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 IL31RAQ8NI17 732 aa21.99■■□□□ 1.11
CLN5-201ENST00000377453 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.99■■□□□ 1.11
CLN5-201ENST00000377453 SEC16BQ96JE7 1060 aa21.99■■□□□ 1.11
CLN5-201ENST00000377453 SEMA4AQ9H3S1 761 aa21.99■■□□□ 1.11
CLN5-201ENST00000377453 AZI2Q9H6S1 392 aa21.99■■□□□ 1.11
CLN5-201ENST00000377453 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.99■■□□□ 1.11
CLN5-201ENST00000377453 CD248Q9HCU0 757 aa21.99■■□□□ 1.11
CLN5-201ENST00000377453 ANKRD62A6NC57 917 aa21.98■■□□□ 1.11
CLN5-201ENST00000377453 FSBPO95073 299 aa21.98■■□□□ 1.11
CLN5-201ENST00000377453 COMTP21964 271 aa21.98■■□□□ 1.11
CLN5-201ENST00000377453 ANXA13P27216 316 aa21.98■■□□□ 1.11
CLN5-201ENST00000377453 ZNF131P52739 623 aa21.98■■□□□ 1.11
CLN5-201ENST00000377453 CCDC38Q502W7 563 aa21.98■■□□□ 1.11
CLN5-201ENST00000377453 AGBL2Q5U5Z8 902 aa21.98■■□□□ 1.11
CLN5-201ENST00000377453 BTNL9Q6UXG8 535 aa21.98■■□□□ 1.11
CLN5-201ENST00000377453 PHLDB2Q86SQ0 1253 aa21.98■■□□□ 1.11
CLN5-201ENST00000377453 PIK3CDO00329 1044 aa21.98■■□□□ 1.11
CLN5-201ENST00000377453 KIAA0391O15091 583 aaKnown RBP21.98■■□□□ 1.11
CLN5-201ENST00000377453 SLC29A2Q14542 456 aa21.98■■□□□ 1.11
CLN5-201ENST00000377453 SLC15A2Q16348 729 aa21.98■■□□□ 1.11
CLN5-201ENST00000377453 C1orf220Q5T0J3 134 aa21.98■■□□□ 1.11
CLN5-201ENST00000377453 MICALCLQ6ZW33 695 aa21.98■■□□□ 1.11
CLN5-201ENST00000377453 TMX4Q9H1E5 349 aaPredicted RBP21.98■■□□□ 1.11
CLN5-201ENST00000377453 FOXO6A8MYZ6 492 aa21.97■■□□□ 1.11
CLN5-201ENST00000377453 CHRNA5P30532 468 aa21.97■■□□□ 1.11
CLN5-201ENST00000377453 PMS2P54278 862 aa21.97■■□□□ 1.11
CLN5-201ENST00000377453 KIF22Q14807 665 aa21.97■■□□□ 1.11
CLN5-201ENST00000377453 STRIP1Q5VSL9 837 aa21.97■■□□□ 1.11
CLN5-201ENST00000377453 PADI6Q6TGC4 694 aa21.97■■□□□ 1.11
CLN5-201ENST00000377453 MIGA2Q7L4E1 593 aa21.97■■□□□ 1.11
CLN5-201ENST00000377453 EPS8L3Q8TE67 593 aaKnown RBP21.97■■□□□ 1.11
CLN5-201ENST00000377453 NACC1Q96RE7 527 aa21.97■■□□□ 1.11
CLN5-201ENST00000377453 MKNK1Q9BUB5 465 aa21.97■■□□□ 1.11
CLN5-201ENST00000377453 CARD9Q9H257 536 aa21.97■■□□□ 1.11
CLN5-201ENST00000377453 GRHL1Q9NZI5 618 aa21.97■■□□□ 1.11
CLN5-201ENST00000377453 IPO5O00410 1097 aaKnown RBP21.97■■□□□ 1.11
CLN5-201ENST00000377453 PYGMP11217 842 aa21.97■■□□□ 1.11
CLN5-201ENST00000377453 RAB17Q9H0T7 212 aa21.97■■□□□ 1.11
CLN5-201ENST00000377453 RPTORQ8N122 1335 aa21.97■■□□□ 1.11
CLN5-201ENST00000377453 ITGB5P18084 799 aa21.96■■□□□ 1.11
CLN5-201ENST00000377453 ALDH1B1P30837 517 aa21.96■■□□□ 1.11
CLN5-201ENST00000377453 PTGIRP43119 386 aa21.96■■□□□ 1.11
CLN5-201ENST00000377453 ACTN3Q08043 901 aaPredicted RBP21.96■■□□□ 1.11
CLN5-201ENST00000377453 MCTP2Q6DN12 878 aa21.96■■□□□ 1.11
CLN5-201ENST00000377453 NOP9Q86U38 636 aaKnown RBP21.96■■□□□ 1.11
CLN5-201ENST00000377453 SLC47A2Q86VL8 602 aa21.96■■□□□ 1.11
CLN5-201ENST00000377453 CABS1Q96KC9 395 aa21.96■■□□□ 1.11
CLN5-201ENST00000377453 AGBL1Q96MI9 1066 aa21.96■■□□□ 1.11
CLN5-201ENST00000377453 PAGR1Q9BTK6 254 aa21.96■■□□□ 1.11
CLN5-201ENST00000377453 KIFC3Q9BVG8 833 aa21.96■■□□□ 1.11
CLN5-201ENST00000377453 WDR11Q9BZH6 1224 aa21.96■■□□□ 1.11
CLN5-201ENST00000377453 TTC7AQ9ULT0 858 aaPredicted RBP21.96■■□□□ 1.11
CLN5-201ENST00000377453 CYP26A1O43174 497 aa21.96■■□□□ 1.11
CLN5-201ENST00000377453 CHN1P15882 459 aa21.96■■□□□ 1.11
CLN5-201ENST00000377453 CCDC121Q6ZUS5 278 aa21.96■■□□□ 1.11
CLN5-201ENST00000377453 CCDC25Q86WR0 208 aa21.96■■□□□ 1.11
CLN5-201ENST00000377453 SUGP1Q8IWZ8 645 aaKnown RBP21.96■■□□□ 1.11
CLN5-201ENST00000377453 VCPKMTQ9H867 229 aa21.96■■□□□ 1.11
CLN5-201ENST00000377453 DNAJC17Q9NVM6 304 aaKnown RBP21.96■■□□□ 1.11
CLN5-201ENST00000377453 COL20A1Q9P218 1284 aa21.96■■□□□ 1.11
CLN5-201ENST00000377453 GOLGA6L10A0A0M3HER8 536 aa21.95■■□□□ 1.11
CLN5-201ENST00000377453 CTNND1O60716 968 aaKnown RBP21.95■■□□□ 1.11
CLN5-201ENST00000377453 CHRNB2P17787 502 aa21.95■■□□□ 1.11
CLN5-201ENST00000377453 VAMP7P51809 220 aa21.95■■□□□ 1.11
CLN5-201ENST00000377453 MAP2K1Q02750 393 aaPredicted RBP21.95■■□□□ 1.11
CLN5-201ENST00000377453 DGKZQ13574 1117 aa21.95■■□□□ 1.11
CLN5-201ENST00000377453 CPLX4Q7Z7G2 160 aa21.95■■□□□ 1.11
CLN5-201ENST00000377453 TLCD1Q96CP7 247 aa21.95■■□□□ 1.11
CLN5-201ENST00000377453 GOLGA6L7A0A1B0GV03 622 aa21.95■■□□□ 1.1
CLN5-201ENST00000377453 APBA3O96018 575 aa21.95■■□□□ 1.1
CLN5-201ENST00000377453 MMEP08473 750 aa21.95■■□□□ 1.1
CLN5-201ENST00000377453 CCDC127Q96BQ5 260 aa21.95■■□□□ 1.1
CLN5-201ENST00000377453 MASTLQ96GX5 879 aa21.95■■□□□ 1.1
CLN5-201ENST00000377453 CCDC113Q9H0I3 377 aa21.95■■□□□ 1.1
CLN5-201ENST00000377453 TOPORSQ9NS56 1045 aaPredicted RBP21.95■■□□□ 1.1
CLN5-201ENST00000377453 DRD4P21917 467 aa21.94■■□□□ 1.1
CLN5-201ENST00000377453 IFNAR2P48551 515 aa21.94■■□□□ 1.1
CLN5-201ENST00000377453 SPP2Q13103 211 aa21.94■■□□□ 1.1
CLN5-201ENST00000377453 EPC2Q52LR7 807 aa21.94■■□□□ 1.1
CLN5-201ENST00000377453 PPM1KQ8N3J5 372 aa21.94■■□□□ 1.1
CLN5-201ENST00000377453 SAAL1Q96ER3 474 aa21.94■■□□□ 1.1
CLN5-201ENST00000377453 TEKT3Q9BXF9 490 aa21.94■■□□□ 1.1
CLN5-201ENST00000377453 HAUS2Q9NVX0 235 aa21.94■■□□□ 1.1
CLN5-201ENST00000377453 ADRB2P07550 413 aa21.94■■□□□ 1.1
CLN5-201ENST00000377453 PPP2R5AQ15172 486 aa21.94■■□□□ 1.1
CLN5-201ENST00000377453 NEK9Q8TD19 979 aa21.94■■□□□ 1.1
CLN5-201ENST00000377453 DHX38Q92620 1227 aaKnown RBP21.94■■□□□ 1.1
CLN5-201ENST00000377453 SEMA4DQ92854 862 aa21.94■■□□□ 1.1
CLN5-201ENST00000377453 CCDC114Q96M63 670 aa21.94■■□□□ 1.1
CLN5-201ENST00000377453 KREMEN1Q96MU8 473 aa21.94■■□□□ 1.1
CLN5-201ENST00000377453 ZSWIM1Q9BR11 485 aa21.94■■□□□ 1.1
CLN5-201ENST00000377453 ADAM7Q9H2U9 754 aa21.94■■□□□ 1.1
CLN5-201ENST00000377453 SLC40A1Q9NP59 571 aa21.94■■□□□ 1.1
CLN5-201ENST00000377453 DBR1Q9UK59 544 aaKnown RBP21.94■■□□□ 1.1
CLN5-201ENST00000377453 STK24Q9Y6E0 443 aa21.94■■□□□ 1.1
CLN5-201ENST00000377453 SLC16A4O15374 487 aa21.93■■□□□ 1.1
CLN5-201ENST00000377453 VIL1P09327 827 aaKnown RBP21.93■■□□□ 1.1
CLN5-201ENST00000377453 C2CD6Q53TS8 623 aa21.93■■□□□ 1.1
CLN5-201ENST00000377453 DAB2IPQ5VWQ8 1189 aa21.93■■□□□ 1.1
CLN5-201ENST00000377453 DENND2CQ68D51 928 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms