RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 AGMOQ6ZNB7 445 aa21.43■■□□□ 1.02
CBWD3-204ENST00000377349 CATSPER4Q7RTX7 472 aa21.43■■□□□ 1.02
CBWD3-204ENST00000377349 ZNF280BQ86YH2 543 aa21.43■■□□□ 1.02
CBWD3-204ENST00000377349 NECTIN4Q96NY8 510 aa21.43■■□□□ 1.02
CBWD3-204ENST00000377349 DHX33Q9H6R0 707 aaKnown RBP21.43■■□□□ 1.02
CBWD3-204ENST00000377349 SPTBN4Q9H254 2564 aa21.42■■□□□ 1.02
CBWD3-204ENST00000377349 FAM205CA6NFA0 338 aa21.42■■□□□ 1.02
CBWD3-204ENST00000377349 JAK2O60674 1132 aa21.42■■□□□ 1.02
CBWD3-204ENST00000377349 HOXA11P31270 313 aaPredicted RBP21.42■■□□□ 1.02
CBWD3-204ENST00000377349 RAB27AP51159 221 aa21.42■■□□□ 1.02
CBWD3-204ENST00000377349 NR5A1Q13285 461 aa21.42■■□□□ 1.02
CBWD3-204ENST00000377349 TRIM29Q14134 588 aa21.42■■□□□ 1.02
CBWD3-204ENST00000377349 UBXN11Q5T124 520 aa21.42■■□□□ 1.02
CBWD3-204ENST00000377349 PPP4R3AQ6IN85 833 aa21.42■■□□□ 1.02
CBWD3-204ENST00000377349 CES5AQ6NT32 575 aa21.42■■□□□ 1.02
CBWD3-204ENST00000377349 KREMEN2Q8NCW0 462 aa21.42■■□□□ 1.02
CBWD3-204ENST00000377349 FAM20AQ96MK3 541 aa21.42■■□□□ 1.02
CBWD3-204ENST00000377349 PRRX2Q99811 253 aa21.42■■□□□ 1.02
CBWD3-204ENST00000377349 TSHZ2Q9NRE2 1034 aa21.42■■□□□ 1.02
CBWD3-204ENST00000377349 INPP5FQ9Y2H2 1132 aa21.42■■□□□ 1.02
CBWD3-204ENST00000377349 NR2E1Q9Y466 385 aa21.42■■□□□ 1.02
CBWD3-204ENST00000377349 PCDHB2Q9Y5E7 798 aa21.42■■□□□ 1.02
CBWD3-204ENST00000377349 COL4A3BPQ9Y5P4 624 aa21.42■■□□□ 1.02
CBWD3-204ENST00000377349 BRD1O95696 1058 aa21.41■■□□□ 1.02
CBWD3-204ENST00000377349 AVPR2P30518 371 aa21.41■■□□□ 1.02
CBWD3-204ENST00000377349 PTPN14Q15678 1187 aa21.41■■□□□ 1.02
CBWD3-204ENST00000377349 RARS2Q5T160 578 aaKnown RBP21.41■■□□□ 1.02
CBWD3-204ENST00000377349 KIAA1841Q6NSI8 718 aa21.41■■□□□ 1.02
CBWD3-204ENST00000377349 MRPL10Q7Z7H8 261 aaKnown RBP21.41■■□□□ 1.02
CBWD3-204ENST00000377349 JPH2Q9BR39 696 aaPredicted RBP21.41■■□□□ 1.02
CBWD3-204ENST00000377349 SMOC2Q9H3U7 446 aa21.41■■□□□ 1.02
CBWD3-204ENST00000377349 DDHD2O94830 711 aa21.4■■□□□ 1.02
CBWD3-204ENST00000377349 CA8P35219 290 aa21.4■■□□□ 1.02
CBWD3-204ENST00000377349 MTHFRP42898 656 aa21.4■■□□□ 1.02
CBWD3-204ENST00000377349 SPIRE1Q08AE8 756 aa21.4■■□□□ 1.02
CBWD3-204ENST00000377349 EARS2Q5JPH6 523 aaKnown RBP21.4■■□□□ 1.02
CBWD3-204ENST00000377349 NCAPH2Q6IBW4 605 aa21.4■■□□□ 1.02
CBWD3-204ENST00000377349 NSUN7Q8NE18 718 aaKnown RBP21.4■■□□□ 1.02
CBWD3-204ENST00000377349 PRPF31Q8WWY3 499 aaKnown RBP21.4■■□□□ 1.02
CBWD3-204ENST00000377349 TMEM143Q96AN5 459 aa21.4■■□□□ 1.02
CBWD3-204ENST00000377349 RIPOR3Q96MK2 946 aa21.4■■□□□ 1.02
CBWD3-204ENST00000377349 DZANK1Q9NVP4 752 aa21.4■■□□□ 1.02
CBWD3-204ENST00000377349 P4HBP07237 508 aaKnown RBP21.39■■□□□ 1.02
CBWD3-204ENST00000377349 FDPSP14324 419 aaKnown RBP21.39■■□□□ 1.02
CBWD3-204ENST00000377349 GCFC2P16383 781 aaKnown RBP21.39■■□□□ 1.02
CBWD3-204ENST00000377349 GIT2Q14161 759 aa21.39■■□□□ 1.02
CBWD3-204ENST00000377349 SLC7A3Q8WY07 619 aa21.39■■□□□ 1.02
CBWD3-204ENST00000377349 CEP170P1Q96L14 293 aa21.39■■□□□ 1.02
CBWD3-204ENST00000377349 GBP3Q9H0R5 595 aa21.39■■□□□ 1.02
CBWD3-204ENST00000377349 BMP2KQ9NSY1 1161 aaPredicted RBP21.39■■□□□ 1.02
CBWD3-204ENST00000377349 SORCS3Q9UPU3 1222 aa21.39■■□□□ 1.02
CBWD3-204ENST00000377349 CARNS1A5YM72 827 aa21.38■■□□□ 1.01
CBWD3-204ENST00000377349 LILRB3O75022 631 aa21.38■■□□□ 1.01
CBWD3-204ENST00000377349 RNASELQ05823 741 aaKnown RBP21.38■■□□□ 1.01
CBWD3-204ENST00000377349 LAMTOR4Q0VGL1 99 aa21.38■■□□□ 1.01
CBWD3-204ENST00000377349 SRGAP1Q7Z6B7 1085 aa21.38■■□□□ 1.01
CBWD3-204ENST00000377349 ZBTB33Q86T24 672 aa21.38■■□□□ 1.01
CBWD3-204ENST00000377349 C4orf19Q8IY42 314 aa21.38■■□□□ 1.01
CBWD3-204ENST00000377349 NAP1L4Q99733 375 aaKnown RBP21.38■■□□□ 1.01
CBWD3-204ENST00000377349 LXNQ9BS40 222 aa21.38■■□□□ 1.01
CBWD3-204ENST00000377349 RGL1Q9NZL6 768 aa21.38■■□□□ 1.01
CBWD3-204ENST00000377349 PPME1Q9Y570 386 aa21.38■■□□□ 1.01
CBWD3-204ENST00000377349 WDR87Q6ZQQ6 2873 aa21.38■■□□□ 1.01
CBWD3-204ENST00000377349 ZBTB39O15060 712 aa21.38■■□□□ 1.01
CBWD3-204ENST00000377349 TBX3O15119 743 aa21.38■■□□□ 1.01
CBWD3-204ENST00000377349 BAG4O95429 457 aaKnown RBP21.38■■□□□ 1.01
CBWD3-204ENST00000377349 ASGR2P07307 311 aa21.38■■□□□ 1.01
CBWD3-204ENST00000377349 SRGAP2CP0DJJ0 459 aa21.38■■□□□ 1.01
CBWD3-204ENST00000377349 RFC5P40937 340 aa21.38■■□□□ 1.01
CBWD3-204ENST00000377349 GUCY1B3Q02153 619 aa21.38■■□□□ 1.01
CBWD3-204ENST00000377349 MTMR3Q13615 1198 aa21.38■■□□□ 1.01
CBWD3-204ENST00000377349 BMS1Q14692 1282 aaKnown RBP21.38■■□□□ 1.01
CBWD3-204ENST00000377349 EPHA7Q15375 998 aa21.38■■□□□ 1.01
CBWD3-204ENST00000377349 CCDC83Q8IWF9 413 aa21.38■■□□□ 1.01
CBWD3-204ENST00000377349 UBALD2Q8IYN6 164 aa21.38■■□□□ 1.01
CBWD3-204ENST00000377349 ZDHHC14Q8IZN3 488 aa21.38■■□□□ 1.01
CBWD3-204ENST00000377349 PSPC1Q8WXF1 523 aaKnown RBP21.38■■□□□ 1.01
CBWD3-204ENST00000377349 PGBD4Q96DM1 585 aa21.38■■□□□ 1.01
CBWD3-204ENST00000377349 RSAD1Q9HA92 442 aa21.38■■□□□ 1.01
CBWD3-204ENST00000377349 ATP2B1P20020 1258 aa21.37■■□□□ 1.01
CBWD3-204ENST00000377349 YWHABP31946 246 aaKnown RBP21.37■■□□□ 1.01
CBWD3-204ENST00000377349 EMC2Q15006 297 aa21.37■■□□□ 1.01
CBWD3-204ENST00000377349 TMC5Q6UXY8 1006 aa21.37■■□□□ 1.01
CBWD3-204ENST00000377349 FERMT3Q86UX7 667 aa21.37■■□□□ 1.01
CBWD3-204ENST00000377349 DIS3L2Q8IYB7 885 aaKnown RBP21.37■■□□□ 1.01
CBWD3-204ENST00000377349 SMG8Q8ND04 991 aaKnown RBP21.37■■□□□ 1.01
CBWD3-204ENST00000377349 XPNPEP1Q9NQW7 623 aa21.37■■□□□ 1.01
CBWD3-204ENST00000377349 FAM86C1Q9NVL1 165 aa21.37■■□□□ 1.01
CBWD3-204ENST00000377349 USTQ9Y2C2 406 aa21.37■■□□□ 1.01
CBWD3-204ENST00000377349 TRIP11Q15643 1979 aa21.37■■□□□ 1.01
CBWD3-204ENST00000377349 CNTNAP2Q9UHC6 1331 aa21.36■■□□□ 1.01
CBWD3-204ENST00000377349 BTBD18B2RXH4 712 aa21.36■■□□□ 1.01
CBWD3-204ENST00000377349 DKC1O60832 514 aaKnown RBP eCLIP21.36■■□□□ 1.01
CBWD3-204ENST00000377349 EFEMP2O95967 443 aa21.36■■□□□ 1.01
CBWD3-204ENST00000377349 CNPP09543 421 aaKnown RBP21.36■■□□□ 1.01
CBWD3-204ENST00000377349 NCLP19338 710 aaKnown RBP21.36■■□□□ 1.01
CBWD3-204ENST00000377349 CLCN4P51793 760 aa21.36■■□□□ 1.01
CBWD3-204ENST00000377349 CYP4A11Q02928 519 aa21.36■■□□□ 1.01
CBWD3-204ENST00000377349 ATAT1Q5SQI0 421 aa21.36■■□□□ 1.01
CBWD3-204ENST00000377349 TDRD5Q8NAT2 981 aaKnown RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms