RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 GYS2P54840 703 aa21.92■■□□□ 1.1
VSX1-202ENST00000376709 SNRNP35Q16560 246 aaKnown RBP21.92■■□□□ 1.1
VSX1-202ENST00000376709 SH3D19Q5HYK7 790 aa21.92■■□□□ 1.1
VSX1-202ENST00000376709 TREML2Q5T2D2 321 aa21.92■■□□□ 1.1
VSX1-202ENST00000376709 MAP4K3Q8IVH8 894 aa21.92■■□□□ 1.1
VSX1-202ENST00000376709 SULF1Q8IWU6 871 aa21.92■■□□□ 1.1
VSX1-202ENST00000376709 HVCN1Q96D96 273 aa21.92■■□□□ 1.1
VSX1-202ENST00000376709 SELENOOQ9BVL4 669 aa21.92■■□□□ 1.1
VSX1-202ENST00000376709 SEPT9Q9UHD8 586 aaPredicted RBP21.92■■□□□ 1.1
VSX1-202ENST00000376709 NFASCO94856 1347 aa21.92■■□□□ 1.1
VSX1-202ENST00000376709 YBX3P16989 372 aaKnown RBP eCLIP21.92■■□□□ 1.1
VSX1-202ENST00000376709 TNFAIP3P21580 790 aa21.92■■□□□ 1.1
VSX1-202ENST00000376709 CNGA1P29973 690 aa21.92■■□□□ 1.1
VSX1-202ENST00000376709 SOX10P56693 466 aa21.92■■□□□ 1.1
VSX1-202ENST00000376709 RNASE9P60153 205 aaKnown RBP21.92■■□□□ 1.1
VSX1-202ENST00000376709 PTPROQ16827 1216 aa21.92■■□□□ 1.1
VSX1-202ENST00000376709 EPC2Q52LR7 807 aa21.92■■□□□ 1.1
VSX1-202ENST00000376709 C1orf220Q5T0J3 134 aa21.92■■□□□ 1.1
VSX1-202ENST00000376709 C17orf75Q9HAS0 396 aa21.92■■□□□ 1.1
VSX1-202ENST00000376709 MYPNQ86TC9 1320 aa21.91■■□□□ 1.1
VSX1-202ENST00000376709 ANKRD63C9JTQ0 380 aa21.91■■□□□ 1.1
VSX1-202ENST00000376709 ADSSP30520 456 aa21.91■■□□□ 1.1
VSX1-202ENST00000376709 ACTR2P61160 394 aa21.91■■□□□ 1.1
VSX1-202ENST00000376709 KIF22Q14807 665 aa21.91■■□□□ 1.1
VSX1-202ENST00000376709 GLE1Q53GS7 698 aaKnown RBP21.91■■□□□ 1.1
VSX1-202ENST00000376709 PEX26Q7Z412 305 aa21.91■■□□□ 1.1
VSX1-202ENST00000376709 DAAM2Q86T65 1068 aa21.91■■□□□ 1.1
VSX1-202ENST00000376709 CBWD2Q8IUF1 395 aa21.91■■□□□ 1.1
VSX1-202ENST00000376709 CCDC60Q8IWA6 550 aaPredicted RBP21.91■■□□□ 1.1
VSX1-202ENST00000376709 SYCE1Q8N0S2 351 aa21.91■■□□□ 1.1
VSX1-202ENST00000376709 OLIG1Q8TAK6 271 aa21.91■■□□□ 1.1
VSX1-202ENST00000376709 PLEKHO2Q8TD55 490 aa21.91■■□□□ 1.1
VSX1-202ENST00000376709 CTNNBL1Q8WYA6 563 aaPredicted RBP21.91■■□□□ 1.1
VSX1-202ENST00000376709 SAAL1Q96ER3 474 aa21.91■■□□□ 1.1
VSX1-202ENST00000376709 PEX10O60683 326 aa21.91■■□□□ 1.1
VSX1-202ENST00000376709 DGAT1O75907 488 aa21.91■■□□□ 1.1
VSX1-202ENST00000376709 ADRB2P07550 413 aa21.91■■□□□ 1.1
VSX1-202ENST00000376709 PRKCEQ02156 737 aa21.91■■□□□ 1.1
VSX1-202ENST00000376709 ARHGEF19Q8IW93 802 aa21.91■■□□□ 1.1
VSX1-202ENST00000376709 SPIRE2Q8WWL2 714 aa21.91■■□□□ 1.1
VSX1-202ENST00000376709 BSNDQ8WZ55 320 aa21.91■■□□□ 1.1
VSX1-202ENST00000376709 SYT11Q9BT88 431 aa21.91■■□□□ 1.1
VSX1-202ENST00000376709 TELO2Q9Y4R8 837 aa21.91■■□□□ 1.1
VSX1-202ENST00000376709 CES2O00748 559 aa21.9■■□□□ 1.1
VSX1-202ENST00000376709 ABCB4P21439 1286 aa21.9■■□□□ 1.1
VSX1-202ENST00000376709 C9orf131Q5VYM1 1079 aa21.9■■□□□ 1.1
VSX1-202ENST00000376709 MCPH1Q8NEM0 835 aa21.9■■□□□ 1.1
VSX1-202ENST00000376709 VTI1AQ96AJ9 217 aa21.9■■□□□ 1.1
VSX1-202ENST00000376709 CCDC127Q96BQ5 260 aa21.9■■□□□ 1.1
VSX1-202ENST00000376709 TMEM117Q9H0C3 514 aa21.9■■□□□ 1.1
VSX1-202ENST00000376709 CSADQ9Y600 493 aa21.9■■□□□ 1.1
VSX1-202ENST00000376709 OTOFQ9HC10 1997 aa21.9■■□□□ 1.1
VSX1-202ENST00000376709 MYH9P35579 1960 aaKnown RBP21.9■■□□□ 1.1
VSX1-202ENST00000376709 ERICH4A6NGS2 130 aa21.89■■□□□ 1.1
VSX1-202ENST00000376709 SPATA31C2B4DYI2 1134 aa21.89■■□□□ 1.1
VSX1-202ENST00000376709 CYP2C19P33261 490 aa21.89■■□□□ 1.1
VSX1-202ENST00000376709 MIS18BP1Q6P0N0 1132 aa21.89■■□□□ 1.1
VSX1-202ENST00000376709 AENQ8WTP8 325 aaKnown RBP21.89■■□□□ 1.1
VSX1-202ENST00000376709 PBKQ96KB5 322 aa21.89■■□□□ 1.1
VSX1-202ENST00000376709 NTPCRQ9BSD7 190 aaKnown RBP21.89■■□□□ 1.1
VSX1-202ENST00000376709 SYT17Q9BSW7 474 aa21.89■■□□□ 1.1
VSX1-202ENST00000376709 CYP26B1Q9NR63 512 aa21.89■■□□□ 1.1
VSX1-202ENST00000376709 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.89■■□□□ 1.1
VSX1-202ENST00000376709 HPCAL4Q9UM19 191 aa21.89■■□□□ 1.1
VSX1-202ENST00000376709 STBD1O95210 358 aa21.89■■□□□ 1.09
VSX1-202ENST00000376709 TMEM253P0C7T8 217 aa21.89■■□□□ 1.09
VSX1-202ENST00000376709 MAP2K1Q02750 393 aaPredicted RBP21.89■■□□□ 1.09
VSX1-202ENST00000376709 ANKRD35Q8N283 1001 aa21.89■■□□□ 1.09
VSX1-202ENST00000376709 USP38Q8NB14 1042 aa21.89■■□□□ 1.09
VSX1-202ENST00000376709 RFFLQ8WZ73 363 aa21.89■■□□□ 1.09
VSX1-202ENST00000376709 ATP6V0A4Q9HBG4 840 aa21.89■■□□□ 1.09
VSX1-202ENST00000376709 MED4Q9NPJ6 270 aa21.89■■□□□ 1.09
VSX1-202ENST00000376709 VPS18Q9P253 973 aa21.89■■□□□ 1.09
VSX1-202ENST00000376709 PFASO15067 1338 aa21.89■■□□□ 1.09
VSX1-202ENST00000376709 PAPPA2Q9BXP8 1791 aa21.88■■□□□ 1.09
VSX1-202ENST00000376709 HNRNPDLO14979 420 aaKnown RBP21.88■■□□□ 1.09
VSX1-202ENST00000376709 USP8P40818 1118 aa21.88■■□□□ 1.09
VSX1-202ENST00000376709 STXBP2Q15833 593 aa21.88■■□□□ 1.09
VSX1-202ENST00000376709 ABHD15Q6UXT9 468 aa21.88■■□□□ 1.09
VSX1-202ENST00000376709 SLFN11Q7Z7L1 901 aa21.88■■□□□ 1.09
VSX1-202ENST00000376709 SLC35G2Q8TBE7 412 aa21.88■■□□□ 1.09
VSX1-202ENST00000376709 POMGNT1Q8WZA1 660 aa21.88■■□□□ 1.09
VSX1-202ENST00000376709 AGPAT1Q99943 283 aa21.88■■□□□ 1.09
VSX1-202ENST00000376709 LCTP09848 1927 aa21.88■■□□□ 1.09
VSX1-202ENST00000376709 FAM170AA1A519 330 aa21.88■■□□□ 1.09
VSX1-202ENST00000376709 CEP104O60308 925 aa21.88■■□□□ 1.09
VSX1-202ENST00000376709 CHST13Q8NET6 341 aa21.88■■□□□ 1.09
VSX1-202ENST00000376709 FAM71BQ8TC56 605 aa21.88■■□□□ 1.09
VSX1-202ENST00000376709 IFT74Q96LB3 600 aa21.88■■□□□ 1.09
VSX1-202ENST00000376709 KRT12Q99456 494 aa21.88■■□□□ 1.09
VSX1-202ENST00000376709 MAF1Q9H063 256 aa21.88■■□□□ 1.09
VSX1-202ENST00000376709 ELP3Q9H9T3 547 aa21.88■■□□□ 1.09
VSX1-202ENST00000376709 OSGEPQ9NPF4 335 aa21.88■■□□□ 1.09
VSX1-202ENST00000376709 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.88■■□□□ 1.09
VSX1-202ENST00000376709 NCANO14594 1321 aa21.88■■□□□ 1.09
VSX1-202ENST00000376709 IGSF9BQ9UPX0 1349 aa21.88■■□□□ 1.09
VSX1-202ENST00000376709 PTPRFP10586 1907 aa21.88■■□□□ 1.09
VSX1-202ENST00000376709 PMM2O15305 246 aa21.87■■□□□ 1.09
VSX1-202ENST00000376709 TNNC1P63316 161 aa21.87■■□□□ 1.09
VSX1-202ENST00000376709 KRT39Q6A163 491 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms