RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 RPL13P26373 211 aaKnown RBP11.46□□□□□ -0.57
PDPN-203ENST00000376061 TMOD1P28289 359 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 CYP2J2P51589 502 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 EFNA5P52803 228 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 COPB1P53618 953 aaKnown RBP11.46□□□□□ -0.57
PDPN-203ENST00000376061 UBASH3AP57075 661 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 SNRPFP62306 86 aaKnown RBP11.46□□□□□ -0.57
PDPN-203ENST00000376061 STRN3Q13033 797 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 ADAM9Q13443 819 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 NBPF20Q3BBV1 942 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 SLC9C1Q4G0N8 1177 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.46□□□□□ -0.57
PDPN-203ENST00000376061 FILIP1Q7Z7B0 1213 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 RNF180Q86T96 592 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 SLC9A9Q8IVB4 645 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 ZBTB8OSQ8IWT0 167 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 KIAA0319LQ8IZA0 1049 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 C7orf31Q8N865 590 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 ZNF668Q96K58 619 aaPredicted RBP11.46□□□□□ -0.57
PDPN-203ENST00000376061 NAP1L5Q96NT1 182 aaPredicted RBP11.46□□□□□ -0.57
PDPN-203ENST00000376061 CTAGE1Q96RT6 745 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 UNC93B1Q9H1C4 597 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 C2orf40Q9H1Z8 148 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 TMEM134Q9H6X4 195 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 AKT3Q9Y243 479 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 SMIM35A0A1B0GVV1 85 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 LRRC10BA6NIK2 292 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 LGALS16A8MUM7 142 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 K7ERI5 159 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 HNRNPDLO14979 420 aaKnown RBP11.45□□□□□ -0.58
PDPN-203ENST00000376061 SLC16A3O15427 465 aaKnown RBP11.45□□□□□ -0.58
PDPN-203ENST00000376061 TREHO43280 583 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 AKAP3O75969 853 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 GNA14O95837 355 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 CYP2C9P11712 490 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 PHKA2P46019 1235 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 MTIF2P46199 727 aaKnown RBP11.45□□□□□ -0.58
PDPN-203ENST00000376061 CASP4P49662 377 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 GPC3P51654 580 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 ACLYP53396 1101 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 MARSP56192 900 aaKnown RBP11.45□□□□□ -0.58
PDPN-203ENST00000376061 PTENP60484 403 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 ZNF200P98182 395 aaPredicted RBP11.45□□□□□ -0.58
PDPN-203ENST00000376061 MBTD1Q05BQ5 628 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 MYBPC2Q14324 1141 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 CCDC40Q4G0X9 1142 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 CEP135Q66GS9 1140 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 ARMCX5Q6P1M9 558 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 SESTD1Q86VW0 696 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 CREBRFQ8IUR6 639 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 TMEM174Q8WUU8 243 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 BICD1Q96G01 975 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 PPP1R16BQ96T49 567 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 CBWD1Q9BRT8 395 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 TUBGCP2Q9BSJ2 902 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 NFKBIZQ9BYH8 718 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 FAM49AQ9H0Q0 323 aaPredicted RBP11.45□□□□□ -0.58
PDPN-203ENST00000376061 VPS16Q9H269 839 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 IFT122Q9HBG6 1241 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 PAK6Q9NQU5 681 aaPredicted RBP11.45□□□□□ -0.58
PDPN-203ENST00000376061 GTF2IRD1Q9UHL9 959 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 GRIN2DO15399 1336 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 DNAH12Q6ZR08 3092 aa11.45□□□□□ -0.58
PDPN-203ENST00000376061 MOXD2PA6NHM9 499 aa11.44□□□□□ -0.58
PDPN-203ENST00000376061 PRKCBP05771 671 aa11.44□□□□□ -0.58
PDPN-203ENST00000376061 TPM3P06753 285 aa11.44□□□□□ -0.58
PDPN-203ENST00000376061 EPB41P11171 864 aaKnown RBP11.44□□□□□ -0.58
PDPN-203ENST00000376061 GNAT1P11488 350 aa11.44□□□□□ -0.58
PDPN-203ENST00000376061 ADSSP30520 456 aa11.44□□□□□ -0.58
PDPN-203ENST00000376061 LIG4P49917 911 aa11.44□□□□□ -0.58
PDPN-203ENST00000376061 POU5F1BQ06416 359 aa11.44□□□□□ -0.58
PDPN-203ENST00000376061 NR1I3Q14994 352 aa11.44□□□□□ -0.58
PDPN-203ENST00000376061 MAPK6Q16659 721 aa11.44□□□□□ -0.58
PDPN-203ENST00000376061 MAN2A1Q16706 1144 aa11.44□□□□□ -0.58
PDPN-203ENST00000376061 MIIPQ5JXC2 388 aa11.44□□□□□ -0.58
PDPN-203ENST00000376061 GDF6Q6KF10 455 aaPredicted RBP11.44□□□□□ -0.58
PDPN-203ENST00000376061 CTU1Q7Z7A3 348 aaKnown RBP11.44□□□□□ -0.58
PDPN-203ENST00000376061 TRIM59Q8IWR1 403 aa11.44□□□□□ -0.58
PDPN-203ENST00000376061 TSEN34Q9BSV6 310 aaKnown RBP11.44□□□□□ -0.58
PDPN-203ENST00000376061 MINDY3Q9H8M7 445 aa11.44□□□□□ -0.58
PDPN-203ENST00000376061 HSPBP1Q9NZL4 362 aa11.44□□□□□ -0.58
PDPN-203ENST00000376061 USP20Q9Y2K6 914 aa11.44□□□□□ -0.58
PDPN-203ENST00000376061 A0A087WZ62 844 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 INO80B-WBP1J3KQ70 363 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 N4BP3O15049 544 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 TEX33O43247 280 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 CABYRO75952 493 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 CCL5P13501 91 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 NLRP11P59045 1033 aaKnown RBP11.43□□□□□ -0.58
PDPN-203ENST00000376061 TMEM62Q0P6H9 643 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 MMRN1Q13201 1228 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 MTFR1Q15390 333 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 PTPN21Q16825 1174 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 KIZQ2M2Z5 673 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 FILIP1LQ4L180 1135 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 FAM47CQ5HY64 1035 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 ZPBP2Q6X784 338 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 FRMD5Q7Z6J6 570 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 ZNF410Q86VK4 478 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 VSTM4Q8IW00 320 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms