RNA–Protein interactions for RNA: ENST00000375784.7

CLIC1-208, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-208ENST00000375784 NCBP1Q09161 790 aaKnown RBP18.42■□□□□ 0.54
CLIC1-208ENST00000375784 PADI6Q6TGC4 694 aa18.42■□□□□ 0.54
CLIC1-208ENST00000375784 CMTR2Q8IYT2 770 aaKnown RBP18.42■□□□□ 0.54
CLIC1-208ENST00000375784 FBXL6Q8N531 539 aa18.42■□□□□ 0.54
CLIC1-208ENST00000375784 KCTD17Q8N5Z5 321 aa18.42■□□□□ 0.54
CLIC1-208ENST00000375784 P2RX5Q93086 422 aa18.42■□□□□ 0.54
CLIC1-208ENST00000375784 PPP2R3CQ969Q6 453 aa18.42■□□□□ 0.54
CLIC1-208ENST00000375784 ZSCAN16Q9H4T2 348 aaPredicted RBP18.42■□□□□ 0.54
CLIC1-208ENST00000375784 DDX19AQ9NUU7 478 aaKnown RBP18.42■□□□□ 0.54
CLIC1-208ENST00000375784 CLEC1BQ9P126 229 aa18.42■□□□□ 0.54
CLIC1-208ENST00000375784 ATG2AQ2TAZ0 1938 aa18.41■□□□□ 0.54
CLIC1-208ENST00000375784 LOXHD1Q8IVV2 1947 aa18.41■□□□□ 0.54
CLIC1-208ENST00000375784 A0A0U1RQF3 1178 aa18.41■□□□□ 0.54
CLIC1-208ENST00000375784 HOXA2O43364 376 aa18.41■□□□□ 0.54
CLIC1-208ENST00000375784 SKIP12755 728 aa18.41■□□□□ 0.54
CLIC1-208ENST00000375784 CYP11B2P19099 503 aa18.41■□□□□ 0.54
CLIC1-208ENST00000375784 CDC25AP30304 524 aa18.41■□□□□ 0.54
CLIC1-208ENST00000375784 COASYQ13057 564 aa18.41■□□□□ 0.54
CLIC1-208ENST00000375784 CBX2Q14781 532 aaPredicted RBP18.41■□□□□ 0.54
CLIC1-208ENST00000375784 PCBP1Q15365 356 aaKnown RBP eCLIP18.41■□□□□ 0.546e-29■■■■□ 20.9
CLIC1-208ENST00000375784 SF3A1Q15459 793 aaKnown RBP18.41■□□□□ 0.54
CLIC1-208ENST00000375784 ECM1Q16610 540 aa18.41■□□□□ 0.54
CLIC1-208ENST00000375784 MAEAQ7L5Y9 396 aa18.41■□□□□ 0.54
CLIC1-208ENST00000375784 EFHBQ8N7U6 833 aa18.41■□□□□ 0.54
CLIC1-208ENST00000375784 SMRP1Q8NCR6 262 aa18.41■□□□□ 0.54
CLIC1-208ENST00000375784 CDK5RAP3Q96JB5 506 aa18.41■□□□□ 0.54
CLIC1-208ENST00000375784 AK8Q96MA6 479 aa18.41■□□□□ 0.54
CLIC1-208ENST00000375784 POLR3FQ9H1D9 316 aaPredicted RBP18.41■□□□□ 0.54
CLIC1-208ENST00000375784 BHMT2Q9H2M3 363 aa18.41■□□□□ 0.54
CLIC1-208ENST00000375784 MTMR6Q9Y217 621 aa18.41■□□□□ 0.54
CLIC1-208ENST00000375784 PIN4Q9Y237 131 aaKnown RBP18.41■□□□□ 0.54
CLIC1-208ENST00000375784 PP2D1A8MPX8 630 aa18.4■□□□□ 0.54
CLIC1-208ENST00000375784 EOMESO95936 686 aa18.4■□□□□ 0.54
CLIC1-208ENST00000375784 DNAJB1P25685 340 aa18.4■□□□□ 0.54
CLIC1-208ENST00000375784 PTENP60484 403 aa18.4■□□□□ 0.54
CLIC1-208ENST00000375784 RESTQ13127 1097 aa18.4■□□□□ 0.54
CLIC1-208ENST00000375784 ZRSR1Q15695 479 aaKnown RBP18.4■□□□□ 0.54
CLIC1-208ENST00000375784 NAALADL2Q58DX5 795 aa18.4■□□□□ 0.54
CLIC1-208ENST00000375784 FAM102BQ5T8I3 360 aa18.4■□□□□ 0.54
CLIC1-208ENST00000375784 TWF2Q6IBS0 349 aaKnown RBP18.4■□□□□ 0.54
CLIC1-208ENST00000375784 ADGRD2Q7Z7M1 963 aa18.4■□□□□ 0.54
CLIC1-208ENST00000375784 ECHDC2Q86YB7 292 aa18.4■□□□□ 0.54
CLIC1-208ENST00000375784 SPPL3Q8TCT6 385 aa18.4■□□□□ 0.54
CLIC1-208ENST00000375784 NT5C3AQ9H0P0 336 aa18.4■□□□□ 0.54
CLIC1-208ENST00000375784 C5orf42Q9H799 3197 aa18.4■□□□□ 0.54
CLIC1-208ENST00000375784 ERLIN2O94905 339 aa18.39■□□□□ 0.53
CLIC1-208ENST00000375784 ITGB1P05556 798 aa18.39■□□□□ 0.53
CLIC1-208ENST00000375784 GLRA2P23416 452 aa18.39■□□□□ 0.53
CLIC1-208ENST00000375784 CAPSQ13938 189 aa18.39■□□□□ 0.53
CLIC1-208ENST00000375784 ABI1Q8IZP0 508 aa18.39■□□□□ 0.53
CLIC1-208ENST00000375784 ASAP3Q8TDY4 903 aa18.39■□□□□ 0.53
CLIC1-208ENST00000375784 TRAIPQ9BWF2 469 aa18.39■□□□□ 0.53
CLIC1-208ENST00000375784 NFKBIZQ9BYH8 718 aa18.39■□□□□ 0.53
CLIC1-208ENST00000375784 MRPL42Q9Y6G3 142 aaKnown RBP18.39■□□□□ 0.53
CLIC1-208ENST00000375784 TRIOO75962 3097 aa18.38■□□□□ 0.53
CLIC1-208ENST00000375784 TBKBP1A7MCY6 615 aa18.38■□□□□ 0.53
CLIC1-208ENST00000375784 INO80B-WBP1J3KQ70 363 aa18.38■□□□□ 0.53
CLIC1-208ENST00000375784 SLC26A4O43511 780 aa18.38■□□□□ 0.53
CLIC1-208ENST00000375784 GFRA3O60609 400 aa18.38■□□□□ 0.53
CLIC1-208ENST00000375784 LONP1P36776 959 aaKnown RBP18.38■□□□□ 0.53
CLIC1-208ENST00000375784 UBA7P41226 1012 aa18.38■□□□□ 0.53
CLIC1-208ENST00000375784 RAB27AP51159 221 aa18.38■□□□□ 0.53
CLIC1-208ENST00000375784 SIGLEC14Q08ET2 396 aa18.38■□□□□ 0.53
CLIC1-208ENST00000375784 PPP2R5AQ15172 486 aa18.38■□□□□ 0.53
CLIC1-208ENST00000375784 PAN2Q504Q3 1202 aaKnown RBP18.38■□□□□ 0.53
CLIC1-208ENST00000375784 IFNLR1Q8IU57 520 aaPredicted RBP18.38■□□□□ 0.53
CLIC1-208ENST00000375784 RNF169Q8NCN4 708 aa18.38■□□□□ 0.53
CLIC1-208ENST00000375784 MMTAG2Q9BU76 263 aaKnown RBP18.38■□□□□ 0.53
CLIC1-208ENST00000375784 MINDY3Q9H8M7 445 aa18.38■□□□□ 0.53
CLIC1-208ENST00000375784 GPRC5CQ9NQ84 441 aa18.38■□□□□ 0.53
CLIC1-208ENST00000375784 AGPAT5Q9NUQ2 364 aa18.38■□□□□ 0.53
CLIC1-208ENST00000375784 USP15Q9Y4E8 981 aaPredicted RBP18.38■□□□□ 0.53
CLIC1-208ENST00000375784 LRRIQ4A6NIV6 560 aa18.37■□□□□ 0.53
CLIC1-208ENST00000375784 E9PMD0 336 aa18.37■□□□□ 0.53
CLIC1-208ENST00000375784 GLP2RO95838 553 aa18.37■□□□□ 0.53
CLIC1-208ENST00000375784 FGFR1P11362 822 aa18.37■□□□□ 0.53
CLIC1-208ENST00000375784 AXLP30530 894 aa18.37■□□□□ 0.53
CLIC1-208ENST00000375784 NRIP1P48552 1158 aa18.37■□□□□ 0.53
CLIC1-208ENST00000375784 HYIQ5T013 277 aa18.37■□□□□ 0.53
CLIC1-208ENST00000375784 SPOUT1Q5T280 376 aaKnown RBP18.37■□□□□ 0.53
CLIC1-208ENST00000375784 CABP7Q86V35 215 aa18.37■□□□□ 0.53
CLIC1-208ENST00000375784 KLHL23Q8NBE8 558 aa18.37■□□□□ 0.53
CLIC1-208ENST00000375784 KIFAP3Q92845 792 aa18.37■□□□□ 0.53
CLIC1-208ENST00000375784 CALML4Q96GE6 196 aa18.37■□□□□ 0.53
CLIC1-208ENST00000375784 IFT74Q96LB3 600 aa18.37■□□□□ 0.53
CLIC1-208ENST00000375784 PHF7Q9BWX1 381 aaPredicted RBP18.37■□□□□ 0.53
CLIC1-208ENST00000375784 TMEM117Q9H0C3 514 aa18.37■□□□□ 0.53
CLIC1-208ENST00000375784 AAASQ9NRG9 546 aa18.37■□□□□ 0.53
CLIC1-208ENST00000375784 FAM86C1Q9NVL1 165 aa18.37■□□□□ 0.53
CLIC1-208ENST00000375784 CLIC4Q9Y696 253 aa18.37■□□□□ 0.53
CLIC1-208ENST00000375784 USP34Q70CQ2 3546 aa18.36■□□□□ 0.53
CLIC1-208ENST00000375784 GATMP50440 423 aa18.36■□□□□ 0.53
CLIC1-208ENST00000375784 FAM173BQ6P4H8 233 aa18.36■□□□□ 0.53
CLIC1-208ENST00000375784 RBM23Q86U06 439 aaKnown RBP18.36■□□□□ 0.53
CLIC1-208ENST00000375784 ZBTB8OSQ8IWT0 167 aa18.36■□□□□ 0.53
CLIC1-208ENST00000375784 POF1BQ8WVV4 589 aa18.36■□□□□ 0.53
CLIC1-208ENST00000375784 RSPH1Q8WYR4 309 aa18.36■□□□□ 0.53
CLIC1-208ENST00000375784 PGBD4Q96DM1 585 aa18.36■□□□□ 0.53
CLIC1-208ENST00000375784 ASIC4Q96FT7 647 aa18.36■□□□□ 0.53
CLIC1-208ENST00000375784 IRF2BPLQ9H1B7 796 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms