RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 XPO6Q96QU8 1125 aaKnown RBP16.41■□□□□ 0.22
MSH5-203ENST00000375750 SLITRK6Q9H5Y7 841 aa16.41■□□□□ 0.22
MSH5-203ENST00000375750 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.41■□□□□ 0.22
MSH5-203ENST00000375750 CHUKO15111 745 aa16.41■□□□□ 0.22
MSH5-203ENST00000375750 CHMP2AO43633 222 aa16.41■□□□□ 0.22
MSH5-203ENST00000375750 ECM2O94769 699 aaPredicted RBP16.41■□□□□ 0.22
MSH5-203ENST00000375750 KRT13P13646 458 aa16.41■□□□□ 0.22
MSH5-203ENST00000375750 IFNAR2P48551 515 aa16.41■□□□□ 0.22
MSH5-203ENST00000375750 MAP3K10Q02779 954 aa16.41■□□□□ 0.22
MSH5-203ENST00000375750 MTMR3Q13615 1198 aa16.41■□□□□ 0.22
MSH5-203ENST00000375750 BTNL9Q6UXG8 535 aa16.41■□□□□ 0.22
MSH5-203ENST00000375750 PARP9Q8IXQ6 854 aa16.41■□□□□ 0.22
MSH5-203ENST00000375750 KRT35Q92764 455 aa16.41■□□□□ 0.22
MSH5-203ENST00000375750 LENG9Q96B70 501 aa16.41■□□□□ 0.22
MSH5-203ENST00000375750 ZDHHC18Q9NUE0 388 aa16.41■□□□□ 0.22
MSH5-203ENST00000375750 PDXKO00764 312 aa16.4■□□□□ 0.22
MSH5-203ENST00000375750 STAT1P42224 750 aa16.4■□□□□ 0.22
MSH5-203ENST00000375750 ZDHHC14Q8IZN3 488 aa16.4■□□□□ 0.22
MSH5-203ENST00000375750 SLC20A1Q8WUM9 679 aa16.4■□□□□ 0.22
MSH5-203ENST00000375750 LMBR1Q8WVP7 490 aa16.4■□□□□ 0.22
MSH5-203ENST00000375750 TLCD1Q96CP7 247 aa16.4■□□□□ 0.22
MSH5-203ENST00000375750 PITPNM2Q9BZ72 1349 aa16.4■□□□□ 0.22
MSH5-203ENST00000375750 TXLNGYQ9BZA5 131 aa16.4■□□□□ 0.22
MSH5-203ENST00000375750 GPR88Q9GZN0 384 aa16.4■□□□□ 0.22
MSH5-203ENST00000375750 DEFB129Q9H1M3 183 aa16.4■□□□□ 0.22
MSH5-203ENST00000375750 SEMA4AQ9H3S1 761 aa16.4■□□□□ 0.22
MSH5-203ENST00000375750 TYW1Q9NV66 732 aaKnown RBP16.4■□□□□ 0.22
MSH5-203ENST00000375750 PPFIA2O75334 1257 aa16.4■□□□□ 0.22
MSH5-203ENST00000375750 SOX5P35711 763 aa16.4■□□□□ 0.22
MSH5-203ENST00000375750 CDR1P51861 262 aa16.4■□□□□ 0.22
MSH5-203ENST00000375750 SLC29A2Q14542 456 aa16.4■□□□□ 0.22
MSH5-203ENST00000375750 GKAP1Q5VSY0 366 aaPredicted RBP16.4■□□□□ 0.22
MSH5-203ENST00000375750 ZNF746Q6NUN9 644 aaPredicted RBP16.4■□□□□ 0.22
MSH5-203ENST00000375750 VPS36Q86VN1 386 aa16.4■□□□□ 0.22
MSH5-203ENST00000375750 KIRREL3Q8IZU9 778 aa16.4■□□□□ 0.22
MSH5-203ENST00000375750 EIF1ADQ8N9N8 165 aaKnown RBP16.4■□□□□ 0.22
MSH5-203ENST00000375750 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.4■□□□□ 0.22
MSH5-203ENST00000375750 SEC14L1Q92503 715 aa16.4■□□□□ 0.22
MSH5-203ENST00000375750 CCT6BQ92526 530 aa16.4■□□□□ 0.22
MSH5-203ENST00000375750 ADAM7Q9H2U9 754 aa16.4■□□□□ 0.22
MSH5-203ENST00000375750 FAM114A2Q9NRY5 505 aa16.4■□□□□ 0.22
MSH5-203ENST00000375750 TCRBV7S2A1N4TA0A589 114 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 C5orf60A6NFR6 353 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 FGFR4P22455 802 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 RDXP35241 583 aaKnown RBP16.39■□□□□ 0.21
MSH5-203ENST00000375750 PPATQ06203 517 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 DGKZQ13574 1117 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 TNFAIP1Q13829 316 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 NBPF12Q5TAG4 269 aaPredicted RBP16.39■□□□□ 0.21
MSH5-203ENST00000375750 DUPD1Q68J44 220 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 ZDHHC24Q6UX98 284 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 FAM186BQ8IYM0 893 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 LRRC34Q8IZ02 419 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 EPS8L3Q8TE67 593 aaKnown RBP16.39■□□□□ 0.21
MSH5-203ENST00000375750 FBXO28Q9NVF7 368 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 GGA2Q9UJY4 613 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 FZD1Q9UP38 647 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 DAAM1Q9Y4D1 1078 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 ATAD5Q96QE3 1844 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 ZMYM2Q9UBW7 1377 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 ANKRD63C9JTQ0 380 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 MSH4O15457 936 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 ASNSP08243 561 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 MMEP08473 750 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 RPA1P27694 616 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 PMS2P54278 862 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 ERMARDQ5T6L9 678 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 CCDC174Q6PII3 467 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 MYCT1Q8N699 235 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 CHMP6Q96FZ7 201 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 BORCS6Q96GS4 357 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 ERP44Q9BS26 406 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 CCDC113Q9H0I3 377 aa16.39■□□□□ 0.21
MSH5-203ENST00000375750 DBR1Q9UK59 544 aaKnown RBP16.39■□□□□ 0.21
MSH5-203ENST00000375750 ATMINO43313 823 aaPredicted RBP16.38■□□□□ 0.21
MSH5-203ENST00000375750 TBCAO75347 108 aaKnown RBP16.38■□□□□ 0.21
MSH5-203ENST00000375750 PTENP60484 403 aa16.38■□□□□ 0.21
MSH5-203ENST00000375750 UBXN2AP68543 259 aa16.38■□□□□ 0.21
MSH5-203ENST00000375750 SNCBQ16143 134 aa16.38■□□□□ 0.21
MSH5-203ENST00000375750 JAMLQ86YT9 394 aa16.38■□□□□ 0.21
MSH5-203ENST00000375750 SYCE1Q8N0S2 351 aa16.38■□□□□ 0.21
MSH5-203ENST00000375750 BANK1Q8NDB2 785 aa16.38■□□□□ 0.21
MSH5-203ENST00000375750 PRMT1Q99873 361 aaKnown RBP16.38■□□□□ 0.21
MSH5-203ENST00000375750 ZNF341Q9BYN7 854 aa16.38■□□□□ 0.21
MSH5-203ENST00000375750 ACP6Q9NPH0 428 aa16.38■□□□□ 0.21
MSH5-203ENST00000375750 SYNPO2Q9UMS6 1093 aa16.38■□□□□ 0.21
MSH5-203ENST00000375750 PAEPP09466 180 aa16.38■□□□□ 0.21
MSH5-203ENST00000375750 FERP16591 822 aa16.38■□□□□ 0.21
MSH5-203ENST00000375750 FAM133BQ5BKY9 247 aaKnown RBP16.38■□□□□ 0.21
MSH5-203ENST00000375750 TTC27Q6P3X3 843 aa16.38■□□□□ 0.21
MSH5-203ENST00000375750 TPH2Q8IWU9 490 aa16.38■□□□□ 0.21
MSH5-203ENST00000375750 CTNNBL1Q8WYA6 563 aaPredicted RBP16.38■□□□□ 0.21
MSH5-203ENST00000375750 RFFLQ8WZ73 363 aa16.38■□□□□ 0.21
MSH5-203ENST00000375750 TBC1D31Q96DN5 1066 aa16.38■□□□□ 0.21
MSH5-203ENST00000375750 BTBD6Q96KE9 485 aa16.38■□□□□ 0.21
MSH5-203ENST00000375750 POP1Q99575 1024 aaKnown RBP16.38■□□□□ 0.21
MSH5-203ENST00000375750 ELAC2Q9BQ52 826 aaKnown RBP16.38■□□□□ 0.21
MSH5-203ENST00000375750 EIF2AK1Q9BQI3 630 aaKnown RBP16.38■□□□□ 0.21
MSH5-203ENST00000375750 FAM129AQ9BZQ8 928 aa16.38■□□□□ 0.21
MSH5-203ENST00000375750 PTPN22Q9Y2R2 807 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms