RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 CDAN1Q8IWY9 1227 aa12.69□□□□□ -0.38
MCF2L-202ENST00000375597 SCFD2Q8WU76 684 aa12.69□□□□□ -0.38
MCF2L-202ENST00000375597 TMEM237Q96Q45 408 aa12.69□□□□□ -0.38
MCF2L-202ENST00000375597 LXNQ9BS40 222 aa12.69□□□□□ -0.38
MCF2L-202ENST00000375597 MYH14Q7Z406 1995 aaKnown RBP12.69□□□□□ -0.38
MCF2L-202ENST00000375597 TMEM120BA0PK00 339 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 RAD17O75943 681 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 PDHA1P08559 390 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 PPP4CP60510 307 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 GPATCH4Q5T3I0 446 aaKnown RBP12.68□□□□□ -0.38
MCF2L-202ENST00000375597 FAM114A2Q9NRY5 505 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 WRAP73Q9P2S5 460 aaPredicted RBP12.68□□□□□ -0.38
MCF2L-202ENST00000375597 PPP1R1BQ9UD71 204 aaPredicted RBP12.68□□□□□ -0.38
MCF2L-202ENST00000375597 ANAPC7Q9UJX3 599 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 TIAM2Q8IVF5 1701 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 DISP2A7MBM2 1401 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 IGF2BP3O00425 579 aaKnown RBP eCLIP12.68□□□□□ -0.38
MCF2L-202ENST00000375597 LCA5LO95447 670 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 CHKAP35790 457 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 CRKP46108 304 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 JAG1P78504 1218 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 NEDD9Q14511 834 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 VSIG1Q86XK7 387 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 CEP350Q5VT06 3117 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 TESPA1A2RU30 521 aaPredicted RBP12.68□□□□□ -0.38
MCF2L-202ENST00000375597 O00370 1275 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 PPEF1O14829 653 aaPredicted RBP12.68□□□□□ -0.38
MCF2L-202ENST00000375597 BANF1O75531 89 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 ALAS1P13196 640 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 KRT15P19012 456 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 ATP2B4P23634 1241 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 C10orf76Q5T2E6 689 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 SLFN12Q8IYM2 578 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 MSL3Q8N5Y2 521 aaKnown RBP12.68□□□□□ -0.38
MCF2L-202ENST00000375597 NSMCE1Q8WV22 266 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 ECT2Q9H8V3 914 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 KIF9Q9HAQ2 790 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 NOD2Q9HC29 1040 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 SLC12A6Q9UHW9 1150 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 DCTN4Q9UJW0 460 aa12.68□□□□□ -0.38
MCF2L-202ENST00000375597 CTDP1Q9Y5B0 961 aaPredicted RBP12.68□□□□□ -0.38
MCF2L-202ENST00000375597 DOCK2Q92608 1830 aa12.67□□□□□ -0.38
MCF2L-202ENST00000375597 ENO4A6NNW6 628 aa12.67□□□□□ -0.38
MCF2L-202ENST00000375597 KRT17Q04695 432 aa12.67□□□□□ -0.38
MCF2L-202ENST00000375597 PPP3CAQ08209 521 aa12.67□□□□□ -0.38
MCF2L-202ENST00000375597 SYDE2Q5VT97 1194 aa12.67□□□□□ -0.38
MCF2L-202ENST00000375597 PPP4R3AQ6IN85 833 aa12.67□□□□□ -0.38
MCF2L-202ENST00000375597 RNF207Q6ZRF8 634 aa12.67□□□□□ -0.38
MCF2L-202ENST00000375597 CBWD2Q8IUF1 395 aa12.67□□□□□ -0.38
MCF2L-202ENST00000375597 VPS37BQ9H9H4 285 aa12.67□□□□□ -0.38
MCF2L-202ENST00000375597 AGPAT3Q9NRZ7 376 aa12.67□□□□□ -0.38
MCF2L-202ENST00000375597 CHST7Q9NS84 486 aa12.67□□□□□ -0.38
MCF2L-202ENST00000375597 AGAP1Q9UPQ3 857 aa12.67□□□□□ -0.38
MCF2L-202ENST00000375597 PCDHA2Q9Y5H9 948 aa12.67□□□□□ -0.38
MCF2L-202ENST00000375597 BRAFP15056 766 aa12.67□□□□□ -0.38
MCF2L-202ENST00000375597 LMNB1P20700 586 aa12.67□□□□□ -0.38
MCF2L-202ENST00000375597 ELF1P32519 619 aa12.67□□□□□ -0.38
MCF2L-202ENST00000375597 ZNF564Q8TBZ8 553 aaPredicted RBP12.67□□□□□ -0.38
MCF2L-202ENST00000375597 AGPAT1Q99943 283 aa12.67□□□□□ -0.38
MCF2L-202ENST00000375597 DNAJC18Q9H819 358 aa12.67□□□□□ -0.38
MCF2L-202ENST00000375597 SIX2Q9NPC8 291 aa12.67□□□□□ -0.38
MCF2L-202ENST00000375597 LRRC4BQ9NT99 713 aa12.67□□□□□ -0.38
MCF2L-202ENST00000375597 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.67□□□□□ -0.38
MCF2L-202ENST00000375597 LRP5O75197 1615 aa12.67□□□□□ -0.38
MCF2L-202ENST00000375597 ABCA3Q99758 1704 aa12.67□□□□□ -0.38
MCF2L-202ENST00000375597 CACNA1SQ13698 1873 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 F5H423 210 aaPredicted RBP12.66□□□□□ -0.38
MCF2L-202ENST00000375597 H0YGN5 161 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 BMP3P12645 472 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 DRD4P21917 467 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 CETN1Q12798 172 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 CYFIP1Q7L576 1253 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 FRMD5Q7Z6J6 570 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 SYT2Q8N9I0 419 aaPredicted RBP12.66□□□□□ -0.38
MCF2L-202ENST00000375597 ACTRT1Q8TDG2 376 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 SLC5A5Q92911 643 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 SGSM3Q96HU1 749 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 APEX2Q9UBZ4 518 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 NFS1Q9Y697 457 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 CCT8L1PA6NM43 557 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 CCDC188H7C350 402 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 MYCNP04198 464 aaPredicted RBP12.66□□□□□ -0.38
MCF2L-202ENST00000375597 RPA1P27694 616 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 MAPK7Q13164 816 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 DNAJC3Q13217 504 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 SPOPLQ6IQ16 392 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 ZNF662Q6ZS27 426 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 PRELID2Q8N945 189 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 IQCDQ96DY2 449 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 C11orf70Q9BRQ4 267 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 WDR18Q9BV38 432 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 GLIS2Q9BZE0 524 aaPredicted RBP12.66□□□□□ -0.38
MCF2L-202ENST00000375597 PPP1R12CQ9BZL4 782 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 MTUS1Q9ULD2 1270 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 SUGT1Q9Y2Z0 365 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 BZW2Q9Y6E2 419 aaKnown RBP12.66□□□□□ -0.38
MCF2L-202ENST00000375597 FSBPO95073 299 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 MAP3K6O95382 1288 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 ZSCAN5DPP0CG00 497 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 RARAP10276 462 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms