RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 CA4P22748 312 aa4.92□□□□□ -1.62
SCN1A-202ENST00000375405 SLC1A4P43007 532 aa4.92□□□□□ -1.62
SCN1A-202ENST00000375405 ABCE1P61221 599 aaKnown RBP4.92□□□□□ -1.62
SCN1A-202ENST00000375405 VSNL1P62760 191 aa4.92□□□□□ -1.62
SCN1A-202ENST00000375405 CYLC2Q14093 348 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-202ENST00000375405 DLGAP5Q15398 846 aa4.92□□□□□ -1.62
SCN1A-202ENST00000375405 TCEA2Q15560 299 aa4.92□□□□□ -1.62
SCN1A-202ENST00000375405 SMAD1Q15797 465 aaKnown RBP4.92□□□□□ -1.62
SCN1A-202ENST00000375405 DDHD1Q8NEL9 900 aa4.92□□□□□ -1.62
SCN1A-202ENST00000375405 PPP1R36Q96LQ0 422 aa4.92□□□□□ -1.62
SCN1A-202ENST00000375405 PRIMPOLQ96LW4 560 aa4.92□□□□□ -1.62
SCN1A-202ENST00000375405 ALDH8A1Q9H2A2 487 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-202ENST00000375405 TRIM39Q9HCM9 518 aa4.92□□□□□ -1.62
SCN1A-202ENST00000375405 RRAGDQ9NQL2 400 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-202ENST00000375405 TNFSF13BQ9Y275 285 aa4.92□□□□□ -1.62
SCN1A-202ENST00000375405 ARHGAP6O43182 974 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 CCDC22O60826 627 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 GAS7O60861 476 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 CLASP2O75122 1294 aaKnown RBP4.91□□□□□ -1.62
SCN1A-202ENST00000375405 JAK1P23458 1154 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 TECP42680 631 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 GUCY1A3Q02108 690 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 DNM1Q05193 864 aaKnown RBP4.91□□□□□ -1.62
SCN1A-202ENST00000375405 SGSM1Q2NKQ1 1148 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 XKR9Q5GH70 373 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 DPP8Q6V1X1 898 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-202ENST00000375405 THEMISQ8N1K5 641 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-202ENST00000375405 TMEM68Q96MH6 324 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 LATS2Q9NRM7 1088 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 EVA1BQ9NVM1 165 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 PPP1R14DQ9NXH3 145 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 SPASTQ9UBP0 616 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 ARMCX3Q9UH62 379 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-202ENST00000375405 GNPATO15228 680 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 APBA3O96018 575 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 YWHABP31946 246 aaKnown RBP4.91□□□□□ -1.62
SCN1A-202ENST00000375405 PDE6CP51160 858 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 GUCY2FP51841 1108 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 NFRKBQ6P4R8 1299 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 DSG4Q86SJ6 1040 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 PHACTR4Q8IZ21 702 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 IGSF22Q8N9C0 903 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 CRELD1Q96HD1 420 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 MRPL40Q9NQ50 206 aaKnown RBP4.91□□□□□ -1.62
SCN1A-202ENST00000375405 ATAD3AQ9NVI7 634 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 PRRG1O14668 218 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 IKBKBO14920 756 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 KMOO15229 486 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 MEFVO15553 781 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-202ENST00000375405 RXRAP19793 462 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 ATP5F1P24539 256 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-202ENST00000375405 KCTD2Q14681 263 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 E2F4Q16254 413 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 COBLL1Q53SF7 1204 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 TRAPPC3LQ5T215 181 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 FAM160B1Q5W0V3 765 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 DARS2Q6PI48 645 aaKnown RBP4.91□□□□□ -1.62
SCN1A-202ENST00000375405 FBXO38Q6PIJ6 1188 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 NELFCDQ8IXH7 590 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.91□□□□□ -1.62
SCN1A-202ENST00000375405 RNFT2Q96EX2 444 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 CALN1Q9BXU9 219 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 TRIT1Q9H3H1 467 aaKnown RBP4.91□□□□□ -1.62
SCN1A-202ENST00000375405 KRCC1Q9NPI7 259 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-202ENST00000375405 GID8Q9NWU2 228 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 KCNH4Q9UQ05 1017 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 FAM50BQ9Y247 325 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 ZNF711Q9Y462 761 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 CCT8L1PA6NM43 557 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 ECEL1O95672 775 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 IL1AP01583 271 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 KCNA2P16389 499 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 PDE6BP35913 854 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 HSD17B3P37058 310 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 ELK3P41970 407 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 COPS2P61201 443 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 NFIXQ14938 502 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 MORF4L2Q15014 288 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 PTPN21Q16825 1174 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 C1orf94Q6P1W5 598 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 TRPM8Q7Z2W7 1104 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 KDELC2Q7Z4H8 507 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 SRRM1Q8IYB3 904 aaKnown RBP4.91□□□□□ -1.62
SCN1A-202ENST00000375405 AVL9Q8NBF6 648 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 DNAAF1Q8NEP3 725 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 OR6P1Q8NGX9 317 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 MAGED4Q96JG8 741 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 NHEJ1Q9H9Q4 299 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-202ENST00000375405 SP110Q9HB58 689 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.91□□□□□ -1.62
SCN1A-202ENST00000375405 ADD3Q9UEY8 706 aaKnown RBP4.91□□□□□ -1.62
SCN1A-202ENST00000375405 GTPBP6O43824 516 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-202ENST00000375405 PLS3P13797 630 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 CPB1P15086 417 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 NOS3P29474 1203 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 BAG6P46379 1132 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 UBE2HP62256 183 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 BNC1Q01954 994 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 TRAF3Q13114 568 aa4.91□□□□□ -1.62
SCN1A-202ENST00000375405 DYMQ7RTS9 669 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms