RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 RNF169Q8NCN4 708 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 RMDN1Q96DB5 314 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 DIABLOQ9NR28 239 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 TBK1Q9UHD2 729 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 PCDHB6Q9Y5E3 794 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 CYP27A1Q02318 531 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 DNAAF3Q8N9W5 541 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 ZNF577Q9BSK1 485 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 SAYSD1Q9NPB0 183 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 PAPOLBQ9NRJ5 636 aaKnown RBP10.81□□□□□ -0.68
PTCH1-204ENST00000375290 BARHL2Q9NY43 387 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 MUTP22033 750 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 EXOSC10Q01780 885 aaKnown RBP10.81□□□□□ -0.68
PTCH1-204ENST00000375290 TMEM259Q4ZIN3 620 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 ARHGEF16Q5VV41 709 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 ZNF564Q8TBZ8 553 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-204ENST00000375290 ERP44Q9BS26 406 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 NAT9Q9BTE0 207 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 WASHC2DQ5SRD0 308 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 NUDCD3Q8IVD9 361 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 RNF103-CHMP3A0A140T963 221 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 CLASP2O75122 1294 aaKnown RBP10.81□□□□□ -0.68
PTCH1-204ENST00000375290 DAB1O75553 588 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 KRT19P08727 400 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 CALB2P22676 271 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 RSRC2Q7L4I2 434 aaKnown RBP10.81□□□□□ -0.68
PTCH1-204ENST00000375290 RCOR2Q8IZ40 523 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 TC2NQ8N9U0 490 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 MAGED4Q96JG8 741 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 MAP4P27816 1152 aaKnown RBP10.81□□□□□ -0.68
PTCH1-204ENST00000375290 PTPN12Q05209 780 aaKnown RBP10.81□□□□□ -0.68
PTCH1-204ENST00000375290 GDAP1Q8TB36 358 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 ZSWIM5Q9P217 1185 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 ITSN1Q15811 1721 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 RAB15P59190 212 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 SFSWAPQ12872 951 aaKnown RBP10.81□□□□□ -0.68
PTCH1-204ENST00000375290 CERKLQ49MI3 558 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-204ENST00000375290 ZNF555Q8NEP9 628 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 SLC40A1Q9NP59 571 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 ABCC3O15438 1527 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 TLR3O15455 904 aaKnown RBP10.81□□□□□ -0.68
PTCH1-204ENST00000375290 MTSS1O43312 755 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 FCGR1AP12314 374 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 CDC27P30260 824 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 TRIM59Q8IWR1 403 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 TSSK1BQ9BXA7 367 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 ZFATQ9P243 1243 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 WARS2Q9UGM6 360 aaKnown RBP10.81□□□□□ -0.68
PTCH1-204ENST00000375290 KIF20BQ96Q89 1820 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 SAC3D1A6NKF1 404 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 M0R2C6 588 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 GUCY1A3Q02108 690 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 TNFAIP2Q03169 654 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 CCDC126Q96EE4 140 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 PALMDQ9NP74 551 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 SERPINB13Q9UIV8 391 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 TULP4Q9NRJ4 1543 aa10.81□□□□□ -0.68
PTCH1-204ENST00000375290 DPYDQ12882 1025 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 EFTUD2Q15029 972 aaKnown RBP eCLIP10.8□□□□□ -0.68
PTCH1-204ENST00000375290 DYDC2Q96IM9 177 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 FAM161BQ96MY7 647 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 MRPL1Q9BYD6 325 aaKnown RBP10.8□□□□□ -0.68
PTCH1-204ENST00000375290 INO80Q9ULG1 1556 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-204ENST00000375290 ZFP1Q6P2D0 407 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 TTC8Q8TAM2 541 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 KCNA6P17658 529 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 SERPINB1P30740 379 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 TRPC1P48995 793 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 VPS41P49754 854 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 KCNQ4P56696 695 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 C1orf131Q8NDD1 294 aaKnown RBP10.8□□□□□ -0.68
PTCH1-204ENST00000375290 DDHD1Q8NEL9 900 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 MYCBPAPQ8TBZ2 947 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 RXFP1Q9HBX9 757 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 ORC4O43929 436 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 DLATP10515 647 aaKnown RBP10.8□□□□□ -0.68
PTCH1-204ENST00000375290 NFRKBQ6P4R8 1299 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 NLRP10Q86W26 655 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 STX19Q8N4C7 294 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 TGFBRAP1Q8WUH2 860 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 TUFT1Q9NNX1 390 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 KMT5AQ9NQR1 393 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 ANAPC7Q9UJX3 599 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 SERPINI2O75830 405 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 MAGEC3Q8TD91 643 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 ANKS1AQ92625 1134 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 WHRNQ9P202 907 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 SUGT1Q9Y2Z0 365 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 DIAPH2O60879 1101 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 RASSF9O75901 435 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 TRIM69Q86WT6 500 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 ZNF804BA4D1E1 1349 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 LOC102724159A0A0B4J2E5 919 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 SLCO1A2P46721 670 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 PWP2Q15269 919 aaKnown RBP10.8□□□□□ -0.68
PTCH1-204ENST00000375290 OTUB1Q96FW1 271 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-204ENST00000375290 TLR7Q9NYK1 1049 aaKnown RBP10.8□□□□□ -0.68
PTCH1-204ENST00000375290 ADAM22Q9P0K1 906 aa10.8□□□□□ -0.68
PTCH1-204ENST00000375290 GTPBP10A4D1E9 387 aaKnown RBP10.8□□□□□ -0.68
PTCH1-204ENST00000375290 CHN1P15882 459 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms