RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 DLG4P78352 724 aa19.58■□□□□ 0.72
HLA-DQB1-201ENST00000374943 ARID5AQ03989 594 aa19.58■□□□□ 0.72
HLA-DQB1-201ENST00000374943 PTK2Q05397 1052 aa19.58■□□□□ 0.72
HLA-DQB1-201ENST00000374943 PPP3CAQ08209 521 aa19.58■□□□□ 0.72
HLA-DQB1-201ENST00000374943 SNRNP35Q16560 246 aaKnown RBP19.58■□□□□ 0.72
HLA-DQB1-201ENST00000374943 LY6KQ17RY6 165 aa19.58■□□□□ 0.72
HLA-DQB1-201ENST00000374943 CCDC62Q6P9F0 684 aa19.58■□□□□ 0.72
HLA-DQB1-201ENST00000374943 ANKRD23Q86SG2 305 aa19.58■□□□□ 0.72
HLA-DQB1-201ENST00000374943 GPRC5AQ8NFJ5 357 aa19.58■□□□□ 0.72
HLA-DQB1-201ENST00000374943 PLEKHO2Q8TD55 490 aa19.58■□□□□ 0.72
HLA-DQB1-201ENST00000374943 ZNF236Q9UL36 1845 aa19.58■□□□□ 0.72
HLA-DQB1-201ENST00000374943 A0A087X0T9 212 aa19.57■□□□□ 0.72
HLA-DQB1-201ENST00000374943 MACROD2A1Z1Q3 448 aa19.57■□□□□ 0.72
HLA-DQB1-201ENST00000374943 PIGRP01833 764 aa19.57■□□□□ 0.72
HLA-DQB1-201ENST00000374943 FAM228BP0C875 321 aa19.57■□□□□ 0.72
HLA-DQB1-201ENST00000374943 CYP2C8P10632 490 aa19.57■□□□□ 0.72
HLA-DQB1-201ENST00000374943 SOX5P35711 763 aa19.57■□□□□ 0.72
HLA-DQB1-201ENST00000374943 TUBB4BP68371 445 aa19.57■□□□□ 0.72
HLA-DQB1-201ENST00000374943 GJB7Q6PEY0 223 aa19.57■□□□□ 0.72
HLA-DQB1-201ENST00000374943 EEPD1Q7L9B9 569 aa19.57■□□□□ 0.72
HLA-DQB1-201ENST00000374943 ZNF571Q7Z3V5 609 aaPredicted RBP19.57■□□□□ 0.72
HLA-DQB1-201ENST00000374943 PDCL2Q8N4E4 241 aa19.57■□□□□ 0.72
HLA-DQB1-201ENST00000374943 ZSWIM2Q8NEG5 633 aa19.57■□□□□ 0.72
HLA-DQB1-201ENST00000374943 TMC2Q8TDI7 906 aa19.57■□□□□ 0.72
HLA-DQB1-201ENST00000374943 GPR20Q99678 358 aa19.57■□□□□ 0.72
HLA-DQB1-201ENST00000374943 ZNF408Q9H9D4 720 aa19.57■□□□□ 0.72
HLA-DQB1-201ENST00000374943 NMRK2Q9NPI5 230 aa19.57■□□□□ 0.72
HLA-DQB1-201ENST00000374943 MORF4L1Q9UBU8 362 aa19.57■□□□□ 0.72
HLA-DQB1-201ENST00000374943 DNAJC12Q9UKB3 198 aa19.57■□□□□ 0.72
HLA-DQB1-201ENST00000374943 NENFQ9UMX5 172 aa19.57■□□□□ 0.72
HLA-DQB1-201ENST00000374943 ZSWIM8A7E2V4 1837 aa19.57■□□□□ 0.72
HLA-DQB1-201ENST00000374943 PDHXO00330 501 aa19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 GLRA2P23416 452 aa19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 GCLCP48506 637 aaPredicted RBP19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 PLPPR4Q7Z2D5 763 aa19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 ABRAQ8N0Z2 381 aa19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 ASAP3Q8TDY4 903 aa19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 GOLGA1Q92805 767 aa19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 MFSD14AQ96MC6 490 aa19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 GPR88Q9GZN0 384 aa19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 AZI2Q9H6S1 392 aa19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 CCL15-CCL14A0A0B4J2E2 113 aa19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 BTNL10A8MVZ5 291 aa19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 BTBD19C9JJ37 291 aa19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 HNRNPDLO14979 420 aaKnown RBP19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 KIAA0391O15091 583 aaKnown RBP19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 MAFO75444 373 aaPredicted RBP19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 ATP1A1P05023 1023 aaKnown RBP19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 MXI1P50539 228 aa19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 CCL15Q16663 113 aa19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 WDR78Q5VTH9 848 aa19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 USP37Q86T82 979 aa19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 VPS36Q86VN1 386 aa19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 CBWD2Q8IUF1 395 aa19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 FBXO16Q8IX29 292 aaPredicted RBP19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 BBXQ8WY36 941 aaPredicted RBP19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 TMEM143Q96AN5 459 aa19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 ALS2CR12Q96Q35 445 aa19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 EFCC1Q9HA90 598 aa19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 GBA2Q9HCG7 927 aaPredicted RBP19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 ADAMTS1Q9UHI8 967 aa19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 JRKLQ9Y4A0 524 aa19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 STYXL1Q9Y6J8 313 aa19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 CAPN6Q9Y6Q1 641 aa19.56■□□□□ 0.72
HLA-DQB1-201ENST00000374943 GOLGA8IPA6NC78 632 aa19.55■□□□□ 0.72
HLA-DQB1-201ENST00000374943 GOLGA8JA6NMD2 632 aa19.55■□□□□ 0.72
HLA-DQB1-201ENST00000374943 RRP9O43818 475 aaKnown RBP19.55■□□□□ 0.72
HLA-DQB1-201ENST00000374943 GAS2O43903 313 aaKnown RBP19.55■□□□□ 0.72
HLA-DQB1-201ENST00000374943 CCDC172P0C7W6 258 aa19.55■□□□□ 0.72
HLA-DQB1-201ENST00000374943 GTF2H1P32780 548 aa19.55■□□□□ 0.72
HLA-DQB1-201ENST00000374943 CHMP4BP1P59074 171 aa19.55■□□□□ 0.72
HLA-DQB1-201ENST00000374943 BMS1Q14692 1282 aaKnown RBP19.55■□□□□ 0.72
HLA-DQB1-201ENST00000374943 DRAP1Q14919 205 aaPredicted RBP19.55■□□□□ 0.72
HLA-DQB1-201ENST00000374943 ZNF792Q3KQV3 632 aa19.55■□□□□ 0.72
HLA-DQB1-201ENST00000374943 GPD1LQ8N335 351 aa19.55■□□□□ 0.72
HLA-DQB1-201ENST00000374943 PARD3BQ8TEW8 1205 aa19.55■□□□□ 0.72
HLA-DQB1-201ENST00000374943 BRI3BPQ8WY22 251 aa19.55■□□□□ 0.72
HLA-DQB1-201ENST00000374943 POMGNT1Q8WZA1 660 aa19.55■□□□□ 0.72
HLA-DQB1-201ENST00000374943 RABGGTAQ92696 567 aa19.55■□□□□ 0.72
HLA-DQB1-201ENST00000374943 SAAL1Q96ER3 474 aa19.55■□□□□ 0.72
HLA-DQB1-201ENST00000374943 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.55■□□□□ 0.72
HLA-DQB1-201ENST00000374943 TMEM117Q9H0C3 514 aa19.55■□□□□ 0.72
HLA-DQB1-201ENST00000374943 DIS3Q9Y2L1 958 aaKnown RBP19.55■□□□□ 0.72
HLA-DQB1-201ENST00000374943 SAR1BQ9Y6B6 198 aa19.55■□□□□ 0.72
HLA-DQB1-201ENST00000374943 EVI5O60447 810 aa19.54■□□□□ 0.72
HLA-DQB1-201ENST00000374943 ZBTB48P10074 688 aaPredicted RBP19.54■□□□□ 0.72
HLA-DQB1-201ENST00000374943 H2AFXP16104 143 aaPredicted RBP19.54■□□□□ 0.72
HLA-DQB1-201ENST00000374943 GCLMP48507 274 aa19.54■□□□□ 0.72
HLA-DQB1-201ENST00000374943 SLC26A2P50443 739 aa19.54■□□□□ 0.72
HLA-DQB1-201ENST00000374943 CYP24A1Q07973 514 aa19.54■□□□□ 0.72
HLA-DQB1-201ENST00000374943 HSP90AA2PQ14568 343 aaPredicted RBP19.54■□□□□ 0.72
HLA-DQB1-201ENST00000374943 TTLL4Q14679 1199 aa19.54■□□□□ 0.72
HLA-DQB1-201ENST00000374943 NAB2Q15742 525 aa19.54■□□□□ 0.72
HLA-DQB1-201ENST00000374943 PHLDB3Q6NSJ2 640 aa19.54■□□□□ 0.72
HLA-DQB1-201ENST00000374943 EXOC8Q8IYI6 725 aa19.54■□□□□ 0.72
HLA-DQB1-201ENST00000374943 SCFD2Q8WU76 684 aa19.54■□□□□ 0.72
HLA-DQB1-201ENST00000374943 NOX5Q96PH1 765 aa19.54■□□□□ 0.72
HLA-DQB1-201ENST00000374943 TMEM134Q9H6X4 195 aa19.54■□□□□ 0.72
HLA-DQB1-201ENST00000374943 KIAA1586Q9HCI6 787 aa19.54■□□□□ 0.72
HLA-DQB1-201ENST00000374943 COQ4Q9Y3A0 265 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms