RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 UBA1P22314 1058 aaKnown RBP16.95■□□□□ 0.3
CCDC40-202ENST00000374876 KCNH2Q12809 1159 aa16.95■□□□□ 0.3
CCDC40-202ENST00000374876 KCNA10Q16322 511 aa16.95■□□□□ 0.3
CCDC40-202ENST00000374876 IQCEQ6IPM2 695 aa16.95■□□□□ 0.3
CCDC40-202ENST00000374876 KCNV1Q6PIU1 500 aa16.95■□□□□ 0.3
CCDC40-202ENST00000374876 FRMD5Q7Z6J6 570 aa16.95■□□□□ 0.3
CCDC40-202ENST00000374876 RNF180Q86T96 592 aa16.95■□□□□ 0.3
CCDC40-202ENST00000374876 GPRASP2Q96D09 838 aa16.95■□□□□ 0.3
CCDC40-202ENST00000374876 UBXN6Q9BZV1 441 aa16.95■□□□□ 0.3
CCDC40-202ENST00000374876 SPC25Q9HBM1 224 aa16.95■□□□□ 0.3
CCDC40-202ENST00000374876 TUFT1Q9NNX1 390 aa16.95■□□□□ 0.3
CCDC40-202ENST00000374876 LUC7LQ9NQ29 371 aaKnown RBP16.95■□□□□ 0.3
CCDC40-202ENST00000374876 Q9Y3F1 56 aa16.95■□□□□ 0.3
CCDC40-202ENST00000374876 RSPH10B2B2RC85 870 aa16.94■□□□□ 0.3
CCDC40-202ENST00000374876 MAP2K7O14733 419 aa16.94■□□□□ 0.3
CCDC40-202ENST00000374876 PJA2O43164 708 aa16.94■□□□□ 0.3
CCDC40-202ENST00000374876 CHMP2AO43633 222 aa16.94■□□□□ 0.3
CCDC40-202ENST00000374876 GGPS1O95749 300 aa16.94■□□□□ 0.3
CCDC40-202ENST00000374876 RSPH10BP0C881 870 aa16.94■□□□□ 0.3
CCDC40-202ENST00000374876 FAM193AP78312 1265 aa16.94■□□□□ 0.3
CCDC40-202ENST00000374876 ARHGAP1Q07960 439 aa16.94■□□□□ 0.3
CCDC40-202ENST00000374876 CTTNQ14247 550 aaKnown RBP16.94■□□□□ 0.3
CCDC40-202ENST00000374876 WDR93Q6P2C0 686 aa16.94■□□□□ 0.3
CCDC40-202ENST00000374876 CYFIP1Q7L576 1253 aa16.94■□□□□ 0.3
CCDC40-202ENST00000374876 TPH2Q8IWU9 490 aa16.94■□□□□ 0.3
CCDC40-202ENST00000374876 DHX37Q8IY37 1157 aaKnown RBP16.94■□□□□ 0.3
CCDC40-202ENST00000374876 KLHDC9Q8NEP7 349 aa16.94■□□□□ 0.3
CCDC40-202ENST00000374876 HSD17B14Q9BPX1 270 aa16.94■□□□□ 0.3
CCDC40-202ENST00000374876 UPF3AQ9H1J1 476 aaKnown RBP16.94■□□□□ 0.3
CCDC40-202ENST00000374876 SNX12Q9UMY4 172 aa16.94■□□□□ 0.3
CCDC40-202ENST00000374876 TELO2Q9Y4R8 837 aa16.94■□□□□ 0.3
CCDC40-202ENST00000374876 ZNF185O15231 689 aa16.94■□□□□ 0.3
CCDC40-202ENST00000374876 POLR3GO15318 223 aaPredicted RBP16.94■□□□□ 0.3
CCDC40-202ENST00000374876 FARP2O94887 1054 aaPredicted RBP16.94■□□□□ 0.3
CCDC40-202ENST00000374876 GCNT3O95395 438 aa16.94■□□□□ 0.3
CCDC40-202ENST00000374876 GH1P01241 217 aa16.94■□□□□ 0.3
CCDC40-202ENST00000374876 GAP43P17677 238 aa16.94■□□□□ 0.3
CCDC40-202ENST00000374876 MCM3P25205 808 aa16.94■□□□□ 0.3
CCDC40-202ENST00000374876 RPL13P26373 211 aaKnown RBP16.94■□□□□ 0.3
CCDC40-202ENST00000374876 OAS2P29728 719 aaKnown RBP16.94■□□□□ 0.3
CCDC40-202ENST00000374876 HOXD13P35453 343 aa16.94■□□□□ 0.3
CCDC40-202ENST00000374876 RAPGEF1Q13905 1077 aa16.94■□□□□ 0.3
CCDC40-202ENST00000374876 FSCN1Q16658 493 aaKnown RBP16.94■□□□□ 0.3
CCDC40-202ENST00000374876 PIGOQ8TEQ8 1089 aa16.94■□□□□ 0.3
CCDC40-202ENST00000374876 DRC1Q96MC2 740 aa16.94■□□□□ 0.3
CCDC40-202ENST00000374876 TYW1Q9NV66 732 aaKnown RBP16.94■□□□□ 0.3
CCDC40-202ENST00000374876 RBAK-RBAKDNI3L0D1 243 aa16.93■□□□□ 0.3
CCDC40-202ENST00000374876 GAS7O60861 476 aa16.93■□□□□ 0.3
CCDC40-202ENST00000374876 PSMD10O75832 226 aa16.93■□□□□ 0.3
CCDC40-202ENST00000374876 AFPP02771 609 aaKnown RBP16.93■□□□□ 0.3
CCDC40-202ENST00000374876 APBA1Q02410 837 aa16.93■□□□□ 0.3
CCDC40-202ENST00000374876 GPS2Q13227 327 aa16.93■□□□□ 0.3
CCDC40-202ENST00000374876 PPP2R5CQ13362 524 aa16.93■□□□□ 0.3
CCDC40-202ENST00000374876 BMT2Q1RMZ1 405 aa16.93■□□□□ 0.3
CCDC40-202ENST00000374876 CELF3Q5SZQ8 465 aaKnown RBP16.93■□□□□ 0.3
CCDC40-202ENST00000374876 CCSAPQ6IQ19 270 aaPredicted RBP16.93■□□□□ 0.3
CCDC40-202ENST00000374876 RINT1Q6NUQ1 792 aa16.93■□□□□ 0.3
CCDC40-202ENST00000374876 ANKLE1Q8NAG6 615 aa16.93■□□□□ 0.3
CCDC40-202ENST00000374876 AFG1LQ8WV93 481 aa16.93■□□□□ 0.3
CCDC40-202ENST00000374876 SLC5A5Q92911 643 aa16.93■□□□□ 0.3
CCDC40-202ENST00000374876 DYDC2Q96IM9 177 aa16.93■□□□□ 0.3
CCDC40-202ENST00000374876 SENP6Q9GZR1 1112 aaPredicted RBP16.93■□□□□ 0.3
CCDC40-202ENST00000374876 RNF216Q9NWF9 866 aaPredicted RBP16.93■□□□□ 0.3
CCDC40-202ENST00000374876 PRDM4Q9UKN5 801 aa16.93■□□□□ 0.3
CCDC40-202ENST00000374876 L1RE1Q9UN81 338 aa16.93■□□□□ 0.3
CCDC40-202ENST00000374876 DOCK5Q9H7D0 1870 aa16.93■□□□□ 0.3
CCDC40-202ENST00000374876 KBTBD13C9JR72 458 aa16.92■□□□□ 0.3
CCDC40-202ENST00000374876 DNM1LO00429 736 aa16.92■□□□□ 0.3
CCDC40-202ENST00000374876 MAFGO15525 162 aa16.92■□□□□ 0.3
CCDC40-202ENST00000374876 SLITRK3O94933 977 aa16.92■□□□□ 0.3
CCDC40-202ENST00000374876 FAM13AO94988 1023 aa16.92■□□□□ 0.3
CCDC40-202ENST00000374876 NR3C1P04150 777 aa16.92■□□□□ 0.3
CCDC40-202ENST00000374876 ASGR1P07306 291 aa16.92■□□□□ 0.3
CCDC40-202ENST00000374876 SP4Q02446 784 aa16.92■□□□□ 0.3
CCDC40-202ENST00000374876 HSDL1Q3SXM5 330 aa16.92■□□□□ 0.3
CCDC40-202ENST00000374876 NOX5Q96PH1 765 aa16.92■□□□□ 0.3
CCDC40-202ENST00000374876 POLD4Q9HCU8 107 aa16.92■□□□□ 0.3
CCDC40-202ENST00000374876 OLFML3Q9NRN5 406 aa16.92■□□□□ 0.3
CCDC40-202ENST00000374876 KCNA2P16389 499 aa16.92■□□□□ 0.3
CCDC40-202ENST00000374876 NAP1L1P55209 391 aaKnown RBP16.92■□□□□ 0.3
CCDC40-202ENST00000374876 ARID5AQ03989 594 aa16.92■□□□□ 0.3
CCDC40-202ENST00000374876 ASIC2Q16515 512 aa16.92■□□□□ 0.3
CCDC40-202ENST00000374876 RNF10Q8N5U6 811 aaKnown RBP16.92■□□□□ 0.3
CCDC40-202ENST00000374876 CDHR1Q96JP9 859 aa16.92■□□□□ 0.3
CCDC40-202ENST00000374876 SPATA33Q96N06 139 aa16.92■□□□□ 0.3
CCDC40-202ENST00000374876 ZNF577Q9BSK1 485 aa16.92■□□□□ 0.3
CCDC40-202ENST00000374876 GANQ9H2C0 597 aa16.92■□□□□ 0.3
CCDC40-202ENST00000374876 METTL14Q9HCE5 456 aaKnown RBP16.92■□□□□ 0.3
CCDC40-202ENST00000374876 TARSL2A2RTX5 802 aaKnown RBP16.91■□□□□ 0.3
CCDC40-202ENST00000374876 SFI1A8K8P3 1242 aa16.91■□□□□ 0.3
CCDC40-202ENST00000374876 SLC16A3O15427 465 aaKnown RBP16.91■□□□□ 0.3
CCDC40-202ENST00000374876 EPB41P11171 864 aaKnown RBP16.91■□□□□ 0.3
CCDC40-202ENST00000374876 PRLRP16471 622 aa16.91■□□□□ 0.3
CCDC40-202ENST00000374876 ACLYP53396 1101 aa16.91■□□□□ 0.3
CCDC40-202ENST00000374876 KLHL30Q0D2K2 578 aa16.91■□□□□ 0.3
CCDC40-202ENST00000374876 LAMC2Q13753 1193 aa16.91■□□□□ 0.3
CCDC40-202ENST00000374876 NEDD9Q14511 834 aa16.91■□□□□ 0.3
CCDC40-202ENST00000374876 DCAF17Q5H9S7 520 aaPredicted RBP16.91■□□□□ 0.3
CCDC40-202ENST00000374876 CXCL17Q6UXB2 119 aa16.91■□□□□ 0.3
CCDC40-202ENST00000374876 UBE2Q1Q7Z7E8 422 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms