RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 SNX5Q9Y5X3 404 aa15.25■□□□□ 0.03
TRAF1-201ENST00000373887 RNF17Q9BXT8 1623 aaKnown RBP15.25■□□□□ 0.03
TRAF1-201ENST00000373887 TRIM49BA6NDI0 452 aa15.25■□□□□ 0.03
TRAF1-201ENST00000373887 VCPP55072 806 aaKnown RBP15.25■□□□□ 0.03
TRAF1-201ENST00000373887 PPP6R3Q5H9R7 873 aaPredicted RBP15.25■□□□□ 0.03
TRAF1-201ENST00000373887 FAM47EQ6ZV65 393 aa15.25■□□□□ 0.03
TRAF1-201ENST00000373887 ZNF70Q9UC06 446 aaPredicted RBP15.25■□□□□ 0.03
TRAF1-201ENST00000373887 PYGBP11216 843 aa15.25■□□□□ 0.03
TRAF1-201ENST00000373887 COPB2P35606 906 aa15.25■□□□□ 0.03
TRAF1-201ENST00000373887 TOB2Q14106 344 aaPredicted RBP15.25■□□□□ 0.03
TRAF1-201ENST00000373887 DHX38Q92620 1227 aaKnown RBP15.25■□□□□ 0.03
TRAF1-201ENST00000373887 PITPNM3Q9BZ71 974 aa15.25■□□□□ 0.03
TRAF1-201ENST00000373887 NGRNQ9NPE2 291 aaKnown RBP15.25■□□□□ 0.03
TRAF1-201ENST00000373887 IQGAP3Q86VI3 1631 aa15.25■□□□□ 0.03
TRAF1-201ENST00000373887 PHLPP2Q6ZVD8 1323 aa15.25■□□□□ 0.03
TRAF1-201ENST00000373887 CAMTA2O94983 1202 aa15.25■□□□□ 0.03
TRAF1-201ENST00000373887 TDP2O95551 362 aa15.25■□□□□ 0.03
TRAF1-201ENST00000373887 ADORA2BP29275 332 aa15.25■□□□□ 0.03
TRAF1-201ENST00000373887 IFNA8P32881 189 aa15.25■□□□□ 0.03
TRAF1-201ENST00000373887 CYP27A1Q02318 531 aa15.25■□□□□ 0.03
TRAF1-201ENST00000373887 SLFN12LQ6IEE8 588 aa15.25■□□□□ 0.03
TRAF1-201ENST00000373887 PLEKHG2Q9H7P9 1386 aa15.25■□□□□ 0.03
TRAF1-201ENST00000373887 COPEO14579 308 aa15.25■□□□□ 0.03
TRAF1-201ENST00000373887 MXD4Q14582 209 aaPredicted RBP15.25■□□□□ 0.03
TRAF1-201ENST00000373887 ZNF699Q32M78 642 aa15.25■□□□□ 0.03
TRAF1-201ENST00000373887 C1orf146Q5VVC0 180 aa15.25■□□□□ 0.03
TRAF1-201ENST00000373887 RFX8Q6ZV50 586 aa15.25■□□□□ 0.03
TRAF1-201ENST00000373887 SH3GLB2Q9NR46 395 aa15.25■□□□□ 0.03
TRAF1-201ENST00000373887 DYNC1LI2O43237 492 aaPredicted RBP15.24■□□□□ 0.03
TRAF1-201ENST00000373887 C6orf222P0C671 652 aaPredicted RBP15.24■□□□□ 0.03
TRAF1-201ENST00000373887 MYBP10242 640 aa15.24■□□□□ 0.03
TRAF1-201ENST00000373887 ELMSAN1Q6PJG2 1045 aa15.24■□□□□ 0.03
TRAF1-201ENST00000373887 ABCB6Q9NP58 842 aa15.24■□□□□ 0.03
TRAF1-201ENST00000373887 MLXIPLQ9NP71 852 aa15.24■□□□□ 0.03
TRAF1-201ENST00000373887 HUS1O60921 280 aa15.24■□□□□ 0.03
TRAF1-201ENST00000373887 WBP4O75554 376 aaKnown RBP15.24■□□□□ 0.03
TRAF1-201ENST00000373887 SERPING1P05155 500 aa15.24■□□□□ 0.03
TRAF1-201ENST00000373887 GRM4Q14833 912 aa15.24■□□□□ 0.03
TRAF1-201ENST00000373887 ERICH1Q86X53 443 aa15.24■□□□□ 0.03
TRAF1-201ENST00000373887 FAM167AQ96KS9 214 aa15.24■□□□□ 0.03
TRAF1-201ENST00000373887 MID2Q9UJV3 735 aa15.24■□□□□ 0.03
TRAF1-201ENST00000373887 CDV3Q9UKY7 258 aaKnown RBP15.24■□□□□ 0.03
TRAF1-201ENST00000373887 ARHGEF37A1IGU5 675 aa15.24■□□□□ 0.03
TRAF1-201ENST00000373887 PTK2BQ14289 1009 aa15.24■□□□□ 0.03
TRAF1-201ENST00000373887 RNF219Q5W0B1 726 aaPredicted RBP15.24■□□□□ 0.03
TRAF1-201ENST00000373887 LXNQ9BS40 222 aa15.24■□□□□ 0.03
TRAF1-201ENST00000373887 PALMDQ9NP74 551 aa15.24■□□□□ 0.03
TRAF1-201ENST00000373887 CHGBP05060 677 aa15.24■□□□□ 0.03
TRAF1-201ENST00000373887 PCYT1AP49585 367 aa15.24■□□□□ 0.03
TRAF1-201ENST00000373887 RESTQ13127 1097 aa15.24■□□□□ 0.03
TRAF1-201ENST00000373887 PSMD2Q13200 908 aa15.24■□□□□ 0.03
TRAF1-201ENST00000373887 RWDD2AQ9UIY3 292 aa15.24■□□□□ 0.03
TRAF1-201ENST00000373887 MMEP08473 750 aa15.24■□□□□ 0.03
TRAF1-201ENST00000373887 PSMC1P62191 440 aaKnown RBP15.24■□□□□ 0.03
TRAF1-201ENST00000373887 MDM2Q00987 491 aaPredicted RBP15.24■□□□□ 0.03
TRAF1-201ENST00000373887 CDC42EP5Q6NZY7 148 aa15.24■□□□□ 0.03
TRAF1-201ENST00000373887 TDRD7Q8NHU6 1098 aaKnown RBP15.24■□□□□ 0.03
TRAF1-201ENST00000373887 TECPR2O15040 1411 aa15.24■□□□□ 0.03
TRAF1-201ENST00000373887 CREB3O43889 395 aa15.23■□□□□ 0.03
TRAF1-201ENST00000373887 CPB1P15086 417 aa15.23■□□□□ 0.03
TRAF1-201ENST00000373887 PAMP19021 973 aa15.23■□□□□ 0.03
TRAF1-201ENST00000373887 TSPY1Q01534 308 aa15.23■□□□□ 0.03
TRAF1-201ENST00000373887 GLYCTKQ8IVS8 523 aa15.23■□□□□ 0.03
TRAF1-201ENST00000373887 AFF4Q9UHB7 1163 aaKnown RBP15.23■□□□□ 0.03
TRAF1-201ENST00000373887 ZFP69BQ9UJL9 534 aa15.23■□□□□ 0.03
TRAF1-201ENST00000373887 IQSEC2Q5JU85 1478 aa15.23■□□□□ 0.03
TRAF1-201ENST00000373887 IPO5O00410 1097 aaKnown RBP15.23■□□□□ 0.03
TRAF1-201ENST00000373887 PIK3R2O00459 728 aa15.23■□□□□ 0.03
TRAF1-201ENST00000373887 ARL13BQ3SXY8 428 aa15.23■□□□□ 0.03
TRAF1-201ENST00000373887 VPS11Q9H270 941 aa15.23■□□□□ 0.03
TRAF1-201ENST00000373887 TBC1D22BQ9NU19 505 aa15.23■□□□□ 0.03
TRAF1-201ENST00000373887 CLCN6P51797 869 aa15.23■□□□□ 0.03
TRAF1-201ENST00000373887 C6orf118Q5T5N4 469 aa15.23■□□□□ 0.03
TRAF1-201ENST00000373887 FAM167BQ9BTA0 163 aa15.23■□□□□ 0.03
TRAF1-201ENST00000373887 MYOZ2Q9NPC6 264 aa15.23■□□□□ 0.03
TRAF1-201ENST00000373887 TOPORSQ9NS56 1045 aaPredicted RBP15.23■□□□□ 0.03
TRAF1-201ENST00000373887 CHCHD3Q9NX63 227 aaKnown RBP15.23■□□□□ 0.03
TRAF1-201ENST00000373887 APOBEC2Q9Y235 224 aaKnown RBP15.23■□□□□ 0.03
TRAF1-201ENST00000373887 SURF1Q15526 300 aa15.23■□□□□ 0.03
TRAF1-201ENST00000373887 STRIP1Q5VSL9 837 aa15.23■□□□□ 0.03
TRAF1-201ENST00000373887 LMBRD2Q68DH5 695 aaPredicted RBP15.23■□□□□ 0.03
TRAF1-201ENST00000373887 TEKT4Q8WW24 435 aa15.23■□□□□ 0.03
TRAF1-201ENST00000373887 HEMGNQ9BXL5 484 aa15.23■□□□□ 0.03
TRAF1-201ENST00000373887 NPHP3-ACAD11A0A0J9YXS1 232 aa15.23■□□□□ 0.03
TRAF1-201ENST00000373887 KRT14P02533 472 aa15.23■□□□□ 0.03
TRAF1-201ENST00000373887 SNAPC2Q13487 334 aa15.23■□□□□ 0.03
TRAF1-201ENST00000373887 CASP8Q14790 479 aa15.23■□□□□ 0.03
TRAF1-201ENST00000373887 SLC26A7Q8TE54 656 aa15.23■□□□□ 0.03
TRAF1-201ENST00000373887 NSUN4Q96CB9 384 aaKnown RBP15.23■□□□□ 0.03
TRAF1-201ENST00000373887 NOP53Q9NZM5 478 aaKnown RBP15.23■□□□□ 0.03
TRAF1-201ENST00000373887 DCTN3O75935 186 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 MOCS2O96007 188 aaPredicted RBP15.22■□□□□ 0.03
TRAF1-201ENST00000373887 RBBP7Q16576 425 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 TMEM270Q6UE05 265 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 IFT43Q96FT9 208 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 FSD1LQ9BXM9 530 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 TEX12Q9BXU0 123 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 OSBPL5Q9H0X9 879 aaPredicted RBP15.22■□□□□ 0.03
TRAF1-201ENST00000373887 ADA2Q9NZK5 511 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 STX18Q9P2W9 335 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms