RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 RAD54LQ92698 747 aa13.27□□□□□ -0.29
HDAC8-201ENST00000373554 MRPL9Q9BYD2 267 aaKnown RBP13.27□□□□□ -0.29
HDAC8-201ENST00000373554 TRIM6Q9C030 488 aaPredicted RBP13.27□□□□□ -0.29
HDAC8-201ENST00000373554 POLD4Q9HCU8 107 aa13.27□□□□□ -0.29
HDAC8-201ENST00000373554 AAASQ9NRG9 546 aa13.27□□□□□ -0.29
HDAC8-201ENST00000373554 STK17AQ9UEE5 414 aa13.27□□□□□ -0.29
HDAC8-201ENST00000373554 KCNG1Q9UIX4 513 aa13.27□□□□□ -0.29
HDAC8-201ENST00000373554 PHLPP2Q6ZVD8 1323 aa13.27□□□□□ -0.29
HDAC8-201ENST00000373554 CNTNAP2Q9UHC6 1331 aa13.27□□□□□ -0.29
HDAC8-201ENST00000373554 CHD7Q9P2D1 2997 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 C5orf67F2Z3F1 127 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 H3BNC9 293 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 B4GALT5O43286 388 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 BRD1O95696 1058 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 PRKCBP05771 671 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 KRT18P05783 430 aaKnown RBP13.26□□□□□ -0.29
HDAC8-201ENST00000373554 LINC00271P0C7V0 271 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 POU3F3P20264 500 aaPredicted RBP13.26□□□□□ -0.29
HDAC8-201ENST00000373554 BMPR1AP36894 532 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 NPTX2P47972 431 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 MAPK7Q13164 816 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 PRPF4BQ13523 1007 aaKnown RBP13.26□□□□□ -0.29
HDAC8-201ENST00000373554 PTPROQ16827 1216 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 FAM187BQ17R55 369 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 CLLU1OSQ5K130 101 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 RRAGBQ5VZM2 374 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 SLC27A1Q6PCB7 646 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 GLB1LQ6UWU2 654 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 CCDC73Q6ZRK6 1079 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 USP49Q70CQ1 688 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 NLRC5Q86WI3 1866 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 GPBP1Q86WP2 473 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 HACE1Q8IYU2 909 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 MICALL1Q8N3F8 863 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 HELQQ8TDG4 1101 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 CPB2Q96IY4 423 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 KIFC3Q9BVG8 833 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 PLVAPQ9BX97 442 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 CCDC113Q9H0I3 377 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 FZD8Q9H461 694 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 KMT5AQ9NQR1 393 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 BLOC1S4Q9NUP1 217 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 LMCD1Q9NZU5 365 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 ODF2LQ9ULJ1 636 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 ATP6V1DQ9Y5K8 247 aa13.26□□□□□ -0.29
HDAC8-201ENST00000373554 A0A1B0GUA9 196 aa13.25□□□□□ -0.29
HDAC8-201ENST00000373554 K7ERI5 159 aa13.25□□□□□ -0.29
HDAC8-201ENST00000373554 LPXNO60711 386 aa13.25□□□□□ -0.29
HDAC8-201ENST00000373554 CUTAO60888 179 aa13.25□□□□□ -0.29
HDAC8-201ENST00000373554 PLS3P13797 630 aa13.25□□□□□ -0.29
HDAC8-201ENST00000373554 LAG3P18627 525 aa13.25□□□□□ -0.29
HDAC8-201ENST00000373554 NCLP19338 710 aaKnown RBP13.25□□□□□ -0.29
HDAC8-201ENST00000373554 STAT6P42226 847 aa13.25□□□□□ -0.29
HDAC8-201ENST00000373554 SMTNP53814 917 aa13.25□□□□□ -0.29
HDAC8-201ENST00000373554 DNM1Q05193 864 aaKnown RBP13.25□□□□□ -0.29
HDAC8-201ENST00000373554 GPM6BQ13491 265 aa13.25□□□□□ -0.29
HDAC8-201ENST00000373554 MCM6Q14566 821 aa13.25□□□□□ -0.29
HDAC8-201ENST00000373554 LONRF3Q496Y0 759 aa13.25□□□□□ -0.29
HDAC8-201ENST00000373554 NAALADL2Q58DX5 795 aa13.25□□□□□ -0.29
HDAC8-201ENST00000373554 UBXN11Q5T124 520 aa13.25□□□□□ -0.29
HDAC8-201ENST00000373554 LRRC15Q8TF66 581 aa13.25□□□□□ -0.29
HDAC8-201ENST00000373554 LPPQ93052 612 aa13.25□□□□□ -0.29
HDAC8-201ENST00000373554 P2RX5Q93086 422 aa13.25□□□□□ -0.29
HDAC8-201ENST00000373554 CASD1Q96PB1 797 aa13.25□□□□□ -0.29
HDAC8-201ENST00000373554 ADPGKQ9BRR6 497 aa13.25□□□□□ -0.29
HDAC8-201ENST00000373554 EIF2AQ9BY44 585 aaKnown RBP13.25□□□□□ -0.29
HDAC8-201ENST00000373554 RNF19AQ9NV58 838 aa13.25□□□□□ -0.29
HDAC8-201ENST00000373554 TYW1Q9NV66 732 aaKnown RBP13.25□□□□□ -0.29
HDAC8-201ENST00000373554 LARSQ9P2J5 1176 aaKnown RBP13.25□□□□□ -0.29
HDAC8-201ENST00000373554 RBM19Q9Y4C8 960 aaKnown RBP13.25□□□□□ -0.29
HDAC8-201ENST00000373554 IPPQ9Y573 584 aa13.25□□□□□ -0.29
HDAC8-201ENST00000373554 PCDHB12Q9Y5F1 795 aa13.25□□□□□ -0.29
HDAC8-201ENST00000373554 MTCH2Q9Y6C9 303 aa13.25□□□□□ -0.29
HDAC8-201ENST00000373554 FNDC1Q4ZHG4 1894 aaPredicted RBP13.25□□□□□ -0.29
HDAC8-201ENST00000373554 MYO9BQ13459 2157 aa13.24□□□□□ -0.29
HDAC8-201ENST00000373554 NPHP3-ACAD11A0A0J9YXS1 232 aa13.24□□□□□ -0.29
HDAC8-201ENST00000373554 H0YCG3 227 aa13.24□□□□□ -0.29
HDAC8-201ENST00000373554 ACKR2O00590 384 aa13.24□□□□□ -0.29
HDAC8-201ENST00000373554 N4BP3O15049 544 aa13.24□□□□□ -0.29
HDAC8-201ENST00000373554 TBCAO75347 108 aaKnown RBP13.24□□□□□ -0.29
HDAC8-201ENST00000373554 FAM13AO94988 1023 aa13.24□□□□□ -0.29
HDAC8-201ENST00000373554 ITGA4P13612 1032 aa13.24□□□□□ -0.29
HDAC8-201ENST00000373554 DDIT3P35638 169 aa13.24□□□□□ -0.29
HDAC8-201ENST00000373554 ME1P48163 572 aa13.24□□□□□ -0.29
HDAC8-201ENST00000373554 KRT85P78386 507 aa13.24□□□□□ -0.29
HDAC8-201ENST00000373554 CACNB1Q02641 598 aaPredicted RBP13.24□□□□□ -0.29
HDAC8-201ENST00000373554 CSPP1Q1MSJ5 1256 aa13.24□□□□□ -0.29
HDAC8-201ENST00000373554 ARSHQ5FYA8 562 aa13.24□□□□□ -0.29
HDAC8-201ENST00000373554 MRPL10Q7Z7H8 261 aaKnown RBP13.24□□□□□ -0.29
HDAC8-201ENST00000373554 CDR2LQ86X02 465 aaPredicted RBP13.24□□□□□ -0.29
HDAC8-201ENST00000373554 URGCPQ8TCY9 931 aa13.24□□□□□ -0.29
HDAC8-201ENST00000373554 SPIRE2Q8WWL2 714 aa13.24□□□□□ -0.29
HDAC8-201ENST00000373554 PPM1EQ8WY54 764 aa13.24□□□□□ -0.29
HDAC8-201ENST00000373554 REEP2Q9BRK0 252 aa13.24□□□□□ -0.29
HDAC8-201ENST00000373554 COL25A1Q9BXS0 654 aaPredicted RBP13.24□□□□□ -0.29
HDAC8-201ENST00000373554 RSAD1Q9HA92 442 aa13.24□□□□□ -0.29
HDAC8-201ENST00000373554 UBN1Q9NPG3 1134 aa13.24□□□□□ -0.29
HDAC8-201ENST00000373554 ARHGAP28Q9P2N2 729 aa13.24□□□□□ -0.29
HDAC8-201ENST00000373554 INPP5FQ9Y2H2 1132 aa13.24□□□□□ -0.29
HDAC8-201ENST00000373554 ZDHHC9Q9Y397 364 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms