RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 STRA6Q9BX79 667 aa11.74□□□□□ -0.53
LCN2-202ENST00000372998 KLC4Q9NSK0 619 aa11.74□□□□□ -0.53
LCN2-202ENST00000372998 ZDHHC18Q9NUE0 388 aa11.74□□□□□ -0.53
LCN2-202ENST00000372998 CTTNBP2NLQ9P2B4 639 aa11.74□□□□□ -0.53
LCN2-202ENST00000372998 PRR12Q9ULL5 1215 aa11.74□□□□□ -0.53
LCN2-202ENST00000372998 ATP8A1Q9Y2Q0 1164 aa11.74□□□□□ -0.53
LCN2-202ENST00000372998 ALG6Q9Y672 507 aa11.74□□□□□ -0.53
LCN2-202ENST00000372998 RGPD3A6NKT7 1758 aaPredicted RBP11.74□□□□□ -0.53
LCN2-202ENST00000372998 RGPD4Q7Z3J3 1758 aa11.74□□□□□ -0.53
LCN2-202ENST00000372998 RBBP6Q7Z6E9 1792 aaKnown RBP11.74□□□□□ -0.53
LCN2-202ENST00000372998 RSPH10B2B2RC85 870 aa11.73□□□□□ -0.53
LCN2-202ENST00000372998 H0YCG3 227 aa11.73□□□□□ -0.53
LCN2-202ENST00000372998 KIAA0391O15091 583 aaKnown RBP11.73□□□□□ -0.53
LCN2-202ENST00000372998 P4HBP07237 508 aaKnown RBP11.73□□□□□ -0.53
LCN2-202ENST00000372998 RSPH10BP0C881 870 aa11.73□□□□□ -0.53
LCN2-202ENST00000372998 POTEJP0CG39 1038 aa11.73□□□□□ -0.53
LCN2-202ENST00000372998 MYBL1P10243 752 aa11.73□□□□□ -0.53
LCN2-202ENST00000372998 VCAM1P19320 739 aa11.73□□□□□ -0.53
LCN2-202ENST00000372998 CETN2P41208 172 aa11.73□□□□□ -0.53
LCN2-202ENST00000372998 MMP13P45452 471 aa11.73□□□□□ -0.53
LCN2-202ENST00000372998 SCNN1DP51172 638 aa11.73□□□□□ -0.53
LCN2-202ENST00000372998 MKRN3Q13064 507 aaKnown RBP11.73□□□□□ -0.53
LCN2-202ENST00000372998 CTTNQ14247 550 aaKnown RBP11.73□□□□□ -0.53
LCN2-202ENST00000372998 SNCBQ16143 134 aa11.73□□□□□ -0.53
LCN2-202ENST00000372998 AOC3Q16853 763 aa11.73□□□□□ -0.53
LCN2-202ENST00000372998 USH1GQ495M9 461 aa11.73□□□□□ -0.53
LCN2-202ENST00000372998 SMIM5Q71RC9 77 aa11.73□□□□□ -0.53
LCN2-202ENST00000372998 MCF2L2Q86YR7 1114 aa11.73□□□□□ -0.53
LCN2-202ENST00000372998 CLEC10AQ8IUN9 316 aa11.73□□□□□ -0.53
LCN2-202ENST00000372998 CCDC13Q8IYE1 715 aa11.73□□□□□ -0.53
LCN2-202ENST00000372998 XXYLT1Q8NBI6 393 aa11.73□□□□□ -0.53
LCN2-202ENST00000372998 SGSM3Q96HU1 749 aa11.73□□□□□ -0.53
LCN2-202ENST00000372998 SERPINB12Q96P63 405 aa11.73□□□□□ -0.53
LCN2-202ENST00000372998 NCAPGQ9BPX3 1015 aa11.73□□□□□ -0.53
LCN2-202ENST00000372998 DPH5Q9H2P9 285 aa11.73□□□□□ -0.53
LCN2-202ENST00000372998 RANBP17Q9H2T7 1088 aaKnown RBP11.73□□□□□ -0.53
LCN2-202ENST00000372998 SEPT11Q9NVA2 429 aaKnown RBP11.73□□□□□ -0.53
LCN2-202ENST00000372998 WHRNQ9P202 907 aa11.73□□□□□ -0.53
LCN2-202ENST00000372998 DDX20Q9UHI6 824 aaKnown RBP11.73□□□□□ -0.53
LCN2-202ENST00000372998 FEM1BQ9UK73 627 aa11.73□□□□□ -0.53
LCN2-202ENST00000372998 GTF3C4Q9UKN8 822 aa11.73□□□□□ -0.53
LCN2-202ENST00000372998 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.73□□□□□ -0.53
LCN2-202ENST00000372998 ZC3H11AO75152 810 aaKnown RBP eCLIP11.72□□□□□ -0.53
LCN2-202ENST00000372998 RASSF9O75901 435 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 FTLP02792 175 aaPredicted RBP11.72□□□□□ -0.53
LCN2-202ENST00000372998 ALAS1P13196 640 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 ITGA4P13612 1032 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 EZRP15311 586 aaKnown RBP11.72□□□□□ -0.53
LCN2-202ENST00000372998 ITIH2P19823 946 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 ABCB4P21439 1286 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 NMT1P30419 496 aaKnown RBP11.72□□□□□ -0.53
LCN2-202ENST00000372998 SLC1A1P43005 524 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 PDE6CP51160 858 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 CYP2J2P51589 502 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 RBM5P52756 815 aaKnown RBP eCLIP11.72□□□□□ -0.53
LCN2-202ENST00000372998 RWDD2BP57060 319 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 BPIFB4P59827 614 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 XRCC4Q13426 336 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 EPC2Q52LR7 807 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 ANKRD20A8PQ5CZ79 823 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 STYK1Q6J9G0 422 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.72□□□□□ -0.53
LCN2-202ENST00000372998 DDX42Q86XP3 938 aaKnown RBP eCLIP11.72□□□□□ -0.53
LCN2-202ENST00000372998 ZNF677Q86XU0 584 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 RDM1Q8NG50 284 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 ATP8B4Q8TF62 1192 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 GJD4Q96KN9 370 aaPredicted RBP11.72□□□□□ -0.53
LCN2-202ENST00000372998 CCDC77Q9BR77 488 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 MOV10L1Q9BXT6 1211 aaKnown RBP11.72□□□□□ -0.53
LCN2-202ENST00000372998 DNAJC18Q9H819 358 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 C17orf75Q9HAS0 396 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 TBC1D22BQ9NU19 505 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 INTS9Q9NV88 658 aaKnown RBP11.72□□□□□ -0.53
LCN2-202ENST00000372998 RGL1Q9NZL6 768 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 FAM198AQ9UFP1 575 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 PPP1R9AQ9ULJ8 1098 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 TRPC6Q9Y210 931 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 TMX2Q9Y320 296 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 PCDHA3Q9Y5H8 950 aa11.72□□□□□ -0.53
LCN2-202ENST00000372998 CCT8L1PA6NM43 557 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 ANKRD65E5RJM6 399 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 K7ENM7 598 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 EML1O00423 815 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 CTNND1O60716 968 aaKnown RBP11.71□□□□□ -0.53
LCN2-202ENST00000372998 GAS8O95995 478 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 CFBP00751 764 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 CYP1A2P05177 515 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 PLS3P13797 630 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 DRD4P21917 467 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 COILP38432 576 aaPredicted RBP11.71□□□□□ -0.53
LCN2-202ENST00000372998 PTGIRP43119 386 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 MXI1P50539 228 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 SEC24CP53992 1094 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 NFIAQ12857 509 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 ARHGAP44Q17R89 818 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 DACT2Q5SW24 774 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 CCDC137Q6PK04 289 aaKnown RBP11.71□□□□□ -0.53
LCN2-202ENST00000372998 B3GNT9Q6UX72 402 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 MIER3Q7Z3K6 550 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 AMIGO3Q86WK7 504 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms