RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 PPP4R3CPQ6ZMV5 832 aa25.1■■□□□ 1.61
COL9A2-201ENST00000372736 ADAMTS19Q8TE59 1207 aa25.1■■□□□ 1.61
COL9A2-201ENST00000372736 SNX21Q969T3 373 aa25.1■■□□□ 1.61
COL9A2-201ENST00000372736 PABPC5Q96DU9 382 aaKnown RBP25.1■■□□□ 1.61
COL9A2-201ENST00000372736 CSRNP2Q9H175 543 aa25.1■■□□□ 1.61
COL9A2-201ENST00000372736 TBC1D13Q9NVG8 400 aa25.1■■□□□ 1.61
COL9A2-201ENST00000372736 DNM3Q9UQ16 869 aa25.1■■□□□ 1.61
COL9A2-201ENST00000372736 INPP5FQ9Y2H2 1132 aa25.1■■□□□ 1.61
COL9A2-201ENST00000372736 PCDHGC5Q9Y5F6 944 aa25.1■■□□□ 1.61
COL9A2-201ENST00000372736 KCNA5P22460 613 aa25.09■■□□□ 1.61
COL9A2-201ENST00000372736 PPM1AP35813 382 aa25.09■■□□□ 1.61
COL9A2-201ENST00000372736 PLCB3Q01970 1234 aa25.09■■□□□ 1.61
COL9A2-201ENST00000372736 ADGRD2Q7Z7M1 963 aa25.09■■□□□ 1.61
COL9A2-201ENST00000372736 PNMA5Q96PV4 448 aa25.09■■□□□ 1.61
COL9A2-201ENST00000372736 RSAD1Q9HA92 442 aa25.09■■□□□ 1.61
COL9A2-201ENST00000372736 TLR9Q9NR96 1032 aa25.09■■□□□ 1.61
COL9A2-201ENST00000372736 FOXD4L1Q9NU39 408 aa25.09■■□□□ 1.61
COL9A2-201ENST00000372736 LZTS1Q9Y250 596 aa25.09■■□□□ 1.61
COL9A2-201ENST00000372736 IPPQ9Y573 584 aa25.09■■□□□ 1.61
COL9A2-201ENST00000372736 CNTNAP2Q9UHC6 1331 aa25.09■■□□□ 1.61
COL9A2-201ENST00000372736 MUC3AQ02505 3323 aa25.09■■□□□ 1.61
COL9A2-201ENST00000372736 BMP15O95972 392 aa25.08■■□□□ 1.61
COL9A2-201ENST00000372736 GTF2F1P35269 517 aaKnown RBP eCLIP25.08■■□□□ 1.61
COL9A2-201ENST00000372736 NAMPTP43490 491 aa25.08■■□□□ 1.61
COL9A2-201ENST00000372736 NCBP1Q09161 790 aaKnown RBP25.08■■□□□ 1.61
COL9A2-201ENST00000372736 RESTQ13127 1097 aa25.08■■□□□ 1.61
COL9A2-201ENST00000372736 CTC1Q2NKJ3 1217 aa25.08■■□□□ 1.61
COL9A2-201ENST00000372736 LEXMQ3ZCV2 418 aa25.08■■□□□ 1.61
COL9A2-201ENST00000372736 ZBTB8OSQ8IWT0 167 aa25.08■■□□□ 1.61
COL9A2-201ENST00000372736 SLC39A11Q8N1S5 342 aa25.08■■□□□ 1.61
COL9A2-201ENST00000372736 MRPS27Q92552 414 aaKnown RBP25.08■■□□□ 1.61
COL9A2-201ENST00000372736 KIFAP3Q92845 792 aa25.08■■□□□ 1.61
COL9A2-201ENST00000372736 PRIMPOLQ96LW4 560 aa25.08■■□□□ 1.61
COL9A2-201ENST00000372736 RUSC1Q9BVN2 902 aa25.08■■□□□ 1.61
COL9A2-201ENST00000372736 CCDC113Q9H0I3 377 aa25.08■■□□□ 1.61
COL9A2-201ENST00000372736 C2orf40Q9H1Z8 148 aa25.08■■□□□ 1.61
COL9A2-201ENST00000372736 FZD8Q9H461 694 aa25.08■■□□□ 1.61
COL9A2-201ENST00000372736 POLD4Q9HCU8 107 aa25.08■■□□□ 1.61
COL9A2-201ENST00000372736 PRMT7Q9NVM4 692 aaPredicted RBP25.08■■□□□ 1.61
COL9A2-201ENST00000372736 SPG21Q9NZD8 308 aa25.08■■□□□ 1.61
COL9A2-201ENST00000372736 FSCN2O14926 492 aa25.07■■□□□ 1.6
COL9A2-201ENST00000372736 B4GALT3O60512 393 aa25.07■■□□□ 1.6
COL9A2-201ENST00000372736 ZC3H11AO75152 810 aaKnown RBP eCLIP25.07■■□□□ 1.6
COL9A2-201ENST00000372736 AFF1P51825 1210 aaKnown RBP25.07■■□□□ 1.6
COL9A2-201ENST00000372736 BCAR1P56945 870 aa25.07■■□□□ 1.6
COL9A2-201ENST00000372736 PPP2R5AQ15172 486 aa25.07■■□□□ 1.6
COL9A2-201ENST00000372736 SF3A1Q15459 793 aaKnown RBP25.07■■□□□ 1.6
COL9A2-201ENST00000372736 FAM187BQ17R55 369 aa25.07■■□□□ 1.6
COL9A2-201ENST00000372736 CNNM3Q8NE01 707 aa25.07■■□□□ 1.6
COL9A2-201ENST00000372736 KIFC3Q9BVG8 833 aa25.07■■□□□ 1.6
COL9A2-201ENST00000372736 CLDND1Q9NY35 253 aa25.07■■□□□ 1.6
COL9A2-201ENST00000372736 BDP1A6H8Y1 2624 aa25.06■■□□□ 1.6
COL9A2-201ENST00000372736 A0A1B0GUA9 196 aa25.06■■□□□ 1.6
COL9A2-201ENST00000372736 TTLL13PA6NNM8 815 aa25.06■■□□□ 1.6
COL9A2-201ENST00000372736 NCK2O43639 380 aa25.06■■□□□ 1.6
COL9A2-201ENST00000372736 LTBRP36941 435 aa25.06■■□□□ 1.6
COL9A2-201ENST00000372736 ERVFC1P60507 584 aa25.06■■□□□ 1.6
COL9A2-201ENST00000372736 ZRSR1Q15695 479 aaKnown RBP25.06■■□□□ 1.6
COL9A2-201ENST00000372736 TMEM119Q4V9L6 283 aa25.06■■□□□ 1.6
COL9A2-201ENST00000372736 CDR2LQ86X02 465 aaPredicted RBP25.06■■□□□ 1.6
COL9A2-201ENST00000372736 DAW1Q8N136 415 aa25.06■■□□□ 1.6
COL9A2-201ENST00000372736 AK8Q96MA6 479 aa25.06■■□□□ 1.6
COL9A2-201ENST00000372736 RNF39Q9H2S5 420 aa25.06■■□□□ 1.6
COL9A2-201ENST00000372736 NXF3Q9H4D5 531 aaKnown RBP25.06■■□□□ 1.6
COL9A2-201ENST00000372736 NRDE2Q9H7Z3 1164 aa25.06■■□□□ 1.6
COL9A2-201ENST00000372736 MTMR6Q9Y217 621 aa25.06■■□□□ 1.6
COL9A2-201ENST00000372736 HES2Q9Y543 173 aa25.06■■□□□ 1.6
COL9A2-201ENST00000372736 H3BQ06 376 aaPredicted RBP25.05■■□□□ 1.6
COL9A2-201ENST00000372736 INPPL1O15357 1258 aa25.05■■□□□ 1.6
COL9A2-201ENST00000372736 EDN1P05305 212 aa25.05■■□□□ 1.6
COL9A2-201ENST00000372736 ITGA4P13612 1032 aa25.05■■□□□ 1.6
COL9A2-201ENST00000372736 GRIN1Q05586 938 aa25.05■■□□□ 1.6
COL9A2-201ENST00000372736 MAPK7Q13164 816 aa25.05■■□□□ 1.6
COL9A2-201ENST00000372736 RINT1Q6NUQ1 792 aa25.05■■□□□ 1.6
COL9A2-201ENST00000372736 SLC27A1Q6PCB7 646 aa25.05■■□□□ 1.6
COL9A2-201ENST00000372736 C1orf186Q6ZWK4 172 aa25.05■■□□□ 1.6
COL9A2-201ENST00000372736 TMEM173Q86WV6 379 aaPredicted RBP25.05■■□□□ 1.6
COL9A2-201ENST00000372736 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.05■■□□□ 1.6
COL9A2-201ENST00000372736 DEPTORQ8TB45 409 aa25.05■■□□□ 1.6
COL9A2-201ENST00000372736 URGCPQ8TCY9 931 aa25.05■■□□□ 1.6
COL9A2-201ENST00000372736 PPP2R3CQ969Q6 453 aa25.05■■□□□ 1.6
COL9A2-201ENST00000372736 IFT74Q96LB3 600 aa25.05■■□□□ 1.6
COL9A2-201ENST00000372736 NECAB3Q96P71 396 aaPredicted RBP25.05■■□□□ 1.6
COL9A2-201ENST00000372736 UHRF1Q96T88 793 aaPredicted RBP25.05■■□□□ 1.6
COL9A2-201ENST00000372736 NT5C3AQ9H0P0 336 aa25.05■■□□□ 1.6
COL9A2-201ENST00000372736 NT5C1B-RDH14C9J2C7 533 aa25.04■■□□□ 1.6
COL9A2-201ENST00000372736 LINC01565O15544 149 aa25.04■■□□□ 1.6
COL9A2-201ENST00000372736 HIP1RO75146 1068 aa25.04■■□□□ 1.6
COL9A2-201ENST00000372736 NPTXRO95502 500 aa25.04■■□□□ 1.6
COL9A2-201ENST00000372736 PRKCBP05771 671 aa25.04■■□□□ 1.6
COL9A2-201ENST00000372736 ALDH7A1P49419 539 aaKnown RBP25.04■■□□□ 1.6
COL9A2-201ENST00000372736 RNASELQ05823 741 aaKnown RBP25.04■■□□□ 1.6
COL9A2-201ENST00000372736 CABP7Q86V35 215 aa25.04■■□□□ 1.6
COL9A2-201ENST00000372736 ZNF280BQ86YH2 543 aa25.04■■□□□ 1.6
COL9A2-201ENST00000372736 KCTD17Q8N5Z5 321 aa25.04■■□□□ 1.6
COL9A2-201ENST00000372736 PLIN2Q99541 437 aa25.04■■□□□ 1.6
COL9A2-201ENST00000372736 TRIM6Q9C030 488 aaPredicted RBP25.04■■□□□ 1.6
COL9A2-201ENST00000372736 IGFLR1Q9H665 355 aa25.04■■□□□ 1.6
COL9A2-201ENST00000372736 UBN1Q9NPG3 1134 aa25.04■■□□□ 1.6
COL9A2-201ENST00000372736 DNAJB4Q9UDY4 337 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms