RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 CDHR5Q9HBB8 845 aa17.4■□□□□ 0.38
TMEM53-204ENST00000372243 TYW1Q9NV66 732 aaKnown RBP17.4■□□□□ 0.38
TMEM53-204ENST00000372243 CTNND2Q9UQB3 1225 aa17.4■□□□□ 0.38
TMEM53-204ENST00000372243 CDY2AQ9Y6F7 541 aa17.4■□□□□ 0.38
TMEM53-204ENST00000372243 SQORQ9Y6N5 450 aa17.4■□□□□ 0.38
TMEM53-204ENST00000372243 PITPNM1O00562 1244 aa17.39■□□□□ 0.37
TMEM53-204ENST00000372243 ACKR2O00590 384 aa17.39■□□□□ 0.37
TMEM53-204ENST00000372243 IKBKBO14920 756 aa17.39■□□□□ 0.37
TMEM53-204ENST00000372243 TGFB1I1O43294 461 aa17.39■□□□□ 0.37
TMEM53-204ENST00000372243 PQBP1O60828 265 aaKnown RBP17.39■□□□□ 0.37
TMEM53-204ENST00000372243 PRKCBP05771 671 aa17.39■□□□□ 0.37
TMEM53-204ENST00000372243 CKBP12277 381 aa17.39■□□□□ 0.37
TMEM53-204ENST00000372243 TLE2Q04725 743 aa17.39■□□□□ 0.37
TMEM53-204ENST00000372243 BFSP2Q13515 415 aa17.39■□□□□ 0.37
TMEM53-204ENST00000372243 NFIL3Q16649 462 aa17.39■□□□□ 0.37
TMEM53-204ENST00000372243 EDRF1Q3B7T1 1238 aa17.39■□□□□ 0.37
TMEM53-204ENST00000372243 TRIM60Q495X7 471 aa17.39■□□□□ 0.37
TMEM53-204ENST00000372243 ZPBP2Q6X784 338 aa17.39■□□□□ 0.37
TMEM53-204ENST00000372243 SYCP3Q8IZU3 236 aa17.39■□□□□ 0.37
TMEM53-204ENST00000372243 TMEM174Q8WUU8 243 aa17.39■□□□□ 0.37
TMEM53-204ENST00000372243 MED15Q96RN5 788 aa17.39■□□□□ 0.37
TMEM53-204ENST00000372243 PPP1R16BQ96T49 567 aa17.39■□□□□ 0.37
TMEM53-204ENST00000372243 OSMRQ99650 979 aa17.39■□□□□ 0.37
TMEM53-204ENST00000372243 CALUO43852 315 aaPredicted RBP17.38■□□□□ 0.37
TMEM53-204ENST00000372243 CHRNA1P02708 482 aa17.38■□□□□ 0.37
TMEM53-204ENST00000372243 IQCF3P0C7M6 154 aa17.38■□□□□ 0.37
TMEM53-204ENST00000372243 FAAP100Q0VG06 881 aa17.38■□□□□ 0.37
TMEM53-204ENST00000372243 AMHR2Q16671 573 aa17.38■□□□□ 0.37
TMEM53-204ENST00000372243 TTI2Q6NXR4 508 aa17.38■□□□□ 0.37
TMEM53-204ENST00000372243 HS2ST1Q7LGA3 356 aa17.38■□□□□ 0.37
TMEM53-204ENST00000372243 TSG101Q99816 390 aa17.38■□□□□ 0.37
TMEM53-204ENST00000372243 MRPL4Q9BYD3 311 aaKnown RBP17.38■□□□□ 0.37
TMEM53-204ENST00000372243 GINS2Q9Y248 185 aa17.38■□□□□ 0.37
TMEM53-204ENST00000372243 SMTNL1A8MU46 457 aa17.37■□□□□ 0.37
TMEM53-204ENST00000372243 HNRNPDLO14979 420 aaKnown RBP17.37■□□□□ 0.37
TMEM53-204ENST00000372243 SFPQP23246 707 aaKnown RBP eCLIP17.37■□□□□ 0.37
TMEM53-204ENST00000372243 PMS1P54277 932 aaKnown RBP17.37■□□□□ 0.37
TMEM53-204ENST00000372243 MYL5Q02045 173 aa17.37■□□□□ 0.37
TMEM53-204ENST00000372243 IQCB1Q15051 598 aa17.37■□□□□ 0.37
TMEM53-204ENST00000372243 LRRC26Q2I0M4 334 aa17.37■□□□□ 0.37
TMEM53-204ENST00000372243 ZNF618Q5T7W0 954 aa17.37■□□□□ 0.37
TMEM53-204ENST00000372243 ANKRD40Q6AI12 368 aa17.37■□□□□ 0.37
TMEM53-204ENST00000372243 GAS2L3Q86XJ1 694 aa17.37■□□□□ 0.37
TMEM53-204ENST00000372243 C12orf56Q8IXR9 622 aa17.37■□□□□ 0.37
TMEM53-204ENST00000372243 USP38Q8NB14 1042 aa17.37■□□□□ 0.37
TMEM53-204ENST00000372243 TMEM40Q8WWA1 233 aa17.37■□□□□ 0.37
TMEM53-204ENST00000372243 ABHD8Q96I13 439 aa17.37■□□□□ 0.37
TMEM53-204ENST00000372243 CBX8Q9HC52 389 aa17.37■□□□□ 0.37
TMEM53-204ENST00000372243 CNTNAP2Q9UHC6 1331 aa17.37■□□□□ 0.37
TMEM53-204ENST00000372243 TRIM49BA6NDI0 452 aa17.36■□□□□ 0.37
TMEM53-204ENST00000372243 CTSHP09668 335 aa17.36■□□□□ 0.37
TMEM53-204ENST00000372243 LIG4P49917 911 aa17.36■□□□□ 0.37
TMEM53-204ENST00000372243 STX17P56962 302 aa17.36■□□□□ 0.37
TMEM53-204ENST00000372243 PRPF4BQ13523 1007 aaKnown RBP17.36■□□□□ 0.37
TMEM53-204ENST00000372243 MYBPC2Q14324 1141 aa17.36■□□□□ 0.37
TMEM53-204ENST00000372243 SPATA1Q5VX52 437 aa17.36■□□□□ 0.37
TMEM53-204ENST00000372243 TRAF7Q6Q0C0 670 aa17.36■□□□□ 0.37
TMEM53-204ENST00000372243 AGPAT3Q9NRZ7 376 aa17.36■□□□□ 0.37
TMEM53-204ENST00000372243 ATP11BQ9Y2G3 1177 aa17.36■□□□□ 0.37
TMEM53-204ENST00000372243 STYXL1Q9Y6J8 313 aa17.36■□□□□ 0.37
TMEM53-204ENST00000372243 ERLIN2O94905 339 aa17.36■□□□□ 0.37
TMEM53-204ENST00000372243 EDN1P05305 212 aa17.36■□□□□ 0.37
TMEM53-204ENST00000372243 SELPP16109 830 aa17.36■□□□□ 0.37
TMEM53-204ENST00000372243 AXLP30530 894 aa17.36■□□□□ 0.37
TMEM53-204ENST00000372243 FKBP3Q00688 224 aaKnown RBP17.36■□□□□ 0.37
TMEM53-204ENST00000372243 NCBP1Q09161 790 aaKnown RBP17.36■□□□□ 0.37
TMEM53-204ENST00000372243 FBXO47Q5MNV8 452 aa17.36■□□□□ 0.37
TMEM53-204ENST00000372243 SLFN12LQ6IEE8 588 aa17.36■□□□□ 0.37
TMEM53-204ENST00000372243 TSHZ1Q6ZSZ6 1077 aa17.36■□□□□ 0.37
TMEM53-204ENST00000372243 FAM43BQ6ZT52 329 aaPredicted RBP17.36■□□□□ 0.37
TMEM53-204ENST00000372243 SLC9A9Q8IVB4 645 aa17.36■□□□□ 0.37
TMEM53-204ENST00000372243 DHX40Q8IX18 779 aaKnown RBP17.36■□□□□ 0.37
TMEM53-204ENST00000372243 ZC3H3Q8IXZ2 948 aaKnown RBP17.36■□□□□ 0.37
TMEM53-204ENST00000372243 BICD1Q96G01 975 aa17.36■□□□□ 0.37
TMEM53-204ENST00000372243 ACO2Q99798 780 aaKnown RBP17.36■□□□□ 0.37
TMEM53-204ENST00000372243 DUSP9Q99956 384 aaKnown RBP17.36■□□□□ 0.37
TMEM53-204ENST00000372243 TARS2Q9BW92 718 aaKnown RBP17.36■□□□□ 0.37
TMEM53-204ENST00000372243 BECN2A8MW95 431 aa17.35■□□□□ 0.37
TMEM53-204ENST00000372243 TSPAN1O60635 241 aa17.35■□□□□ 0.37
TMEM53-204ENST00000372243 CSDE1O75534 798 aaKnown RBP17.35■□□□□ 0.37
TMEM53-204ENST00000372243 RPS6KA5O75582 802 aa17.35■□□□□ 0.37
TMEM53-204ENST00000372243 TOM1L1O75674 476 aa17.35■□□□□ 0.37
TMEM53-204ENST00000372243 PARNO95453 639 aaKnown RBP17.35■□□□□ 0.37
TMEM53-204ENST00000372243 CLTBP09497 229 aa17.35■□□□□ 0.37
TMEM53-204ENST00000372243 GARTP22102 1010 aa17.35■□□□□ 0.37
TMEM53-204ENST00000372243 RPL13P26373 211 aaKnown RBP17.35■□□□□ 0.37
TMEM53-204ENST00000372243 NCAPHQ15003 741 aa17.35■□□□□ 0.37
TMEM53-204ENST00000372243 SLC39A4Q6P5W5 647 aa17.35■□□□□ 0.37
TMEM53-204ENST00000372243 LRRC8DQ7L1W4 858 aa17.35■□□□□ 0.37
TMEM53-204ENST00000372243 CATSPER4Q7RTX7 472 aa17.35■□□□□ 0.37
TMEM53-204ENST00000372243 AOPEPQ8N6M6 819 aa17.35■□□□□ 0.37
TMEM53-204ENST00000372243 NOC4LQ9BVI4 516 aaKnown RBP17.35■□□□□ 0.37
TMEM53-204ENST00000372243 IKZF4Q9H2S9 585 aa17.35■□□□□ 0.37
TMEM53-204ENST00000372243 TBX21Q9UL17 535 aa17.35■□□□□ 0.37
TMEM53-204ENST00000372243 TNFSF13BQ9Y275 285 aa17.35■□□□□ 0.37
TMEM53-204ENST00000372243 NOC2LQ9Y3T9 749 aaKnown RBP17.35■□□□□ 0.37
TMEM53-204ENST00000372243 A0A1B0GUA9 196 aa17.34■□□□□ 0.37
TMEM53-204ENST00000372243 ANKRD63C9JTQ0 380 aa17.34■□□□□ 0.37
TMEM53-204ENST00000372243 KIAA0391O15091 583 aaKnown RBP17.34■□□□□ 0.37
TMEM53-204ENST00000372243 GPR182O15218 404 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms