RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 PCNX4Q63HM2 1172 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 C6orf89Q6UWU4 347 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 RUFY4Q6ZNE9 571 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 SV2BQ7L1I2 683 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 PIK3R5Q8WYR1 880 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 LRRC45Q96CN5 670 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 TSG101Q99816 390 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 UNC93B1Q9H1C4 597 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 TMBIM4Q9HC24 238 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 GOLGA6L7A0A1B0GV03 622 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 LRRC53A6NM62 1247 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 BHMG1C9JSJ3 638 aaPredicted RBP12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 KIF1CO43896 1103 aaKnown RBP12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 GNA14O95837 355 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 ADCYAP1R1P41586 468 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 ITGB3BPQ13352 177 aaPredicted RBP12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 SPDYCQ5MJ68 293 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 TMEM63BQ5T3F8 832 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 MAP3K21Q5TCX8 1036 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 MEI1Q5TIA1 1274 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 AGBL2Q5U5Z8 902 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 FBXW10Q5XX13 1052 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 TAPT1Q6NXT6 567 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 RRAGAQ7L523 313 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 NLRP14Q86W24 1093 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 KIAA0895Q8NCT3 520 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 CYP2W1Q8TAV3 490 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 MYCBPAPQ8TBZ2 947 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 ZNF333Q96JL9 665 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 PBKQ96KB5 322 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 CALR3Q96L12 384 aaKnown RBP12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 INPP4AQ96PE3 977 aaPredicted RBP12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 CCT8L2Q96SF2 557 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 WDR11Q9BZH6 1224 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 KATNBL1Q9H079 304 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 RNF208Q9H0X6 261 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 ISCUQ9H1K1 167 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 EPB41L5Q9HCM4 733 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 VTA1Q9NP79 307 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 TMEM59LQ9UK28 342 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 SAMM50Q9Y512 469 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 FRMPD4Q14CM0 1322 aa12.44□□□□□ -0.42
TSPAN1-201ENST00000372003 ZNF236Q9UL36 1845 aa12.43□□□□□ -0.42
TSPAN1-201ENST00000372003 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.43□□□□□ -0.42
TSPAN1-201ENST00000372003 PP2D1A8MPX8 630 aa12.43□□□□□ -0.42
TSPAN1-201ENST00000372003 SORBS3O60504 671 aa12.43□□□□□ -0.42
TSPAN1-201ENST00000372003 RGS20O76081 388 aa12.43□□□□□ -0.42
TSPAN1-201ENST00000372003 GLI1P08151 1106 aa12.43□□□□□ -0.42
TSPAN1-201ENST00000372003 PAEPP09466 180 aa12.43□□□□□ -0.42
TSPAN1-201ENST00000372003 CCDC172P0C7W6 258 aa12.43□□□□□ -0.42
TSPAN1-201ENST00000372003 CCL5P13501 91 aa12.43□□□□□ -0.42
TSPAN1-201ENST00000372003 ANXA13P27216 316 aa12.43□□□□□ -0.42
TSPAN1-201ENST00000372003 MATR3P43243 847 aaKnown RBP eCLIP12.43□□□□□ -0.42
TSPAN1-201ENST00000372003 CARSP49589 748 aaKnown RBP12.43□□□□□ -0.42
TSPAN1-201ENST00000372003 MTMR3Q13615 1198 aa12.43□□□□□ -0.42
TSPAN1-201ENST00000372003 IFI16Q16666 785 aaKnown RBP12.43□□□□□ -0.42
TSPAN1-201ENST00000372003 LETM2Q2VYF4 491 aa12.43□□□□□ -0.42
TSPAN1-201ENST00000372003 SFMBT2Q5VUG0 894 aa12.43□□□□□ -0.42
TSPAN1-201ENST00000372003 HGSNATQ68CP4 663 aa12.43□□□□□ -0.42
TSPAN1-201ENST00000372003 CACNA2D4Q7Z3S7 1137 aa12.43□□□□□ -0.42
TSPAN1-201ENST00000372003 LENG1Q96BZ8 264 aaPredicted RBP12.43□□□□□ -0.42
TSPAN1-201ENST00000372003 ZBTB9Q96C00 473 aa12.43□□□□□ -0.42
TSPAN1-201ENST00000372003 ARMC5Q96C12 935 aa12.43□□□□□ -0.42
TSPAN1-201ENST00000372003 UIMC1Q96RL1 719 aa12.43□□□□□ -0.42
TSPAN1-201ENST00000372003 CXorf56Q9H5V9 222 aa12.43□□□□□ -0.42
TSPAN1-201ENST00000372003 MMRN2Q9H8L6 949 aa12.43□□□□□ -0.42
TSPAN1-201ENST00000372003 NFU1Q9UMS0 254 aa12.43□□□□□ -0.42
TSPAN1-201ENST00000372003 C5orf60A6NFR6 353 aa12.42□□□□□ -0.42
TSPAN1-201ENST00000372003 SLC26A4O43511 780 aa12.42□□□□□ -0.42
TSPAN1-201ENST00000372003 RASSF9O75901 435 aa12.42□□□□□ -0.42
TSPAN1-201ENST00000372003 KRT14P02533 472 aa12.42□□□□□ -0.42
TSPAN1-201ENST00000372003 TXNP10599 105 aaKnown RBP12.42□□□□□ -0.42
TSPAN1-201ENST00000372003 ITGB5P18084 799 aa12.42□□□□□ -0.42
TSPAN1-201ENST00000372003 RDXP35241 583 aaKnown RBP12.42□□□□□ -0.42
TSPAN1-201ENST00000372003 MARSP56192 900 aaKnown RBP12.42□□□□□ -0.42
TSPAN1-201ENST00000372003 GUCY2DQ02846 1103 aa12.42□□□□□ -0.42
TSPAN1-201ENST00000372003 TNFAIP2Q03169 654 aa12.42□□□□□ -0.42
TSPAN1-201ENST00000372003 LY6KQ17RY6 165 aa12.42□□□□□ -0.42
TSPAN1-201ENST00000372003 GNPTABQ3T906 1256 aa12.42□□□□□ -0.42
TSPAN1-201ENST00000372003 GJC2Q5T442 439 aaPredicted RBP12.42□□□□□ -0.42
TSPAN1-201ENST00000372003 XRRA1Q6P2D8 792 aa12.42□□□□□ -0.42
TSPAN1-201ENST00000372003 NEK8Q86SG6 692 aa12.42□□□□□ -0.42
TSPAN1-201ENST00000372003 NLRX1Q86UT6 975 aa12.42□□□□□ -0.42
TSPAN1-201ENST00000372003 LRRC15Q8TF66 581 aa12.42□□□□□ -0.42
TSPAN1-201ENST00000372003 CRYGNQ8WXF5 182 aa12.42□□□□□ -0.42
TSPAN1-201ENST00000372003 CEP63Q96MT8 703 aa12.42□□□□□ -0.42
TSPAN1-201ENST00000372003 DEFB118Q96PH6 123 aa12.42□□□□□ -0.42
TSPAN1-201ENST00000372003 MXRA8Q9BRK3 442 aa12.42□□□□□ -0.42
TSPAN1-201ENST00000372003 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.42□□□□□ -0.42
TSPAN1-201ENST00000372003 FAM207AQ9NSI2 230 aaPredicted RBP12.42□□□□□ -0.42
TSPAN1-201ENST00000372003 PKD2L1Q9P0L9 805 aa12.42□□□□□ -0.42
TSPAN1-201ENST00000372003 UBIAD1Q9Y5Z9 338 aa12.42□□□□□ -0.42
TSPAN1-201ENST00000372003 HTTP42858 3142 aa12.42□□□□□ -0.42
TSPAN1-201ENST00000372003 FAM86B1E9PN63 330 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 CCDC188H7C350 402 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 SEPT4O43236 478 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 ADCY6O43306 1168 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 EDIL3O43854 480 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 STAM2O75886 525 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 ARIH2O95376 493 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms