RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 RPUSD2Q8IZ73 545 aaKnown RBP11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 JDP2Q8WYK2 163 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 REEP2Q9BRK0 252 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 TXLNGQ9NUQ3 528 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 CFBP00751 764 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 ATP4AP20648 1035 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 PAPOLAP51003 745 aaKnown RBP11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 SP4Q02446 784 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 COG2Q14746 738 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 CNGA2Q16280 664 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 PALB2Q86YC2 1186 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 DNAJC9Q8WXX5 260 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 CEP63Q96MT8 703 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 RUNDC3BQ96NL0 473 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 SMC6Q96SB8 1091 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 PLVAPQ9BX97 442 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 EDEM3Q9BZQ6 932 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 ZNF148Q9UQR1 794 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 SPDYE5A6NIY4 337 aa11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 SNUPNO95149 360 aaKnown RBP11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 RARAP10276 462 aa11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 RFC4P35249 363 aa11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 SERPINB4P48594 390 aa11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 SCNN1DP51172 638 aa11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 MYL7Q01449 175 aa11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 KLC1Q07866 573 aa11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 SMAD1Q15797 465 aaKnown RBP11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 IRF2BP2Q7Z5L9 587 aa11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 GBP7Q8N8V2 638 aaPredicted RBP11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 SUCLA2Q9P2R7 463 aaPredicted RBP11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 FOXN3O00409 490 aaPredicted RBP11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 ZBTB39O15060 712 aa11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 GHRP10912 638 aa11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 AUHQ13825 339 aaKnown RBP11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 ZYXQ15942 572 aaKnown RBP11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 PIDD1Q9HB75 910 aa11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 SAYSD1Q9NPB0 183 aa11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 ADAM22Q9P0K1 906 aa11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 NKX1-2Q9UD57 310 aaPredicted RBP11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 AJAP1Q9UKB5 411 aaPredicted RBP11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 ZNF804BA4D1E1 1349 aa11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 ARHGAP42A6NI28 874 aa11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 ANKRD63C9JTQ0 380 aa11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 MAPK13O15264 365 aa11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 ASAP2O43150 1006 aa11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 SOX5P35711 763 aa11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 CETN2P41208 172 aa11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 STRN3Q13033 797 aa11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 ITIH4Q14624 930 aa11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 FYB2Q5VWT5 728 aa11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 SLC51AQ86UW1 340 aa11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 IKBKGQ9Y6K9 419 aa11.16□□□□□ -0.62
PRPF38B-201ENST00000370021 PAPPAQ13219 1627 aa11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 IGSF9BQ9UPX0 1349 aa11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 GYG2O15488 501 aa11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 RIPK2O43353 540 aa11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 KITP10721 976 aa11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 BCRP11274 1271 aa11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 PCP11498 1178 aaKnown RBP11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 CYP11B2P19099 503 aa11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 ECHS1P30084 290 aa11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 PSMC2P35998 433 aaKnown RBP11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 IRX4P78413 519 aa11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 SLC35G1Q2M3R5 365 aa11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 TBC1D22AQ8WUA7 517 aa11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 ABTB1Q969K4 478 aaPredicted RBP11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 SLC4A9Q96Q91 983 aa11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 LZTS2Q9BRK4 669 aa11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 DHX36Q9H2U1 1008 aaKnown RBP11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 AIPL1Q9NZN9 384 aa11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 ZFP69BQ9UJL9 534 aa11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 RABGAP1Q9Y3P9 1069 aa11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 C2CD2Q9Y426 696 aa11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 PODXLO00592 558 aa11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 MED24O75448 989 aa11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 PYGMP11217 842 aa11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 IL6STP40189 918 aaPredicted RBP11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 DYNLT1P63172 113 aa11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 PARP10Q53GL7 1025 aa11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 MFSD14BQ5SR56 506 aa11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 FGD4Q96M96 766 aa11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 IQCGQ9H095 443 aaKnown RBP11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 MYLK2Q9H1R3 596 aa11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 MYH2Q9UKX2 1941 aa11.15□□□□□ -0.62
PRPF38B-201ENST00000370021 NWD2Q9ULI1 1742 aa11.15□□□□□ -0.63
PRPF38B-201ENST00000370021 PI4K2BG5E9Z4 385 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 KIAA0391O15091 583 aaKnown RBP11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 RASA1P20936 1047 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 CACNB3P54284 484 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 PTENP60484 403 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 MIS18BP1Q6P0N0 1132 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 CADPS2Q86UW7 1296 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 ANKMY2Q8IV38 441 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 ANKRD35Q8N283 1001 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 RILPQ96NA2 401 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 NUP85Q9BW27 656 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 METTL14Q9HCE5 456 aaKnown RBP11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 KCNQ5Q9NR82 932 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 CYP26A1O43174 497 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms