RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 THEMIS2Q5TEJ8 643 aa19.08■□□□□ 0.64
SNX27-203ENST00000368843 KRT39Q6A163 491 aa19.08■□□□□ 0.64
SNX27-203ENST00000368843 CYP19A1P11511 503 aaPredicted RBP19.08■□□□□ 0.64
SNX27-203ENST00000368843 SMARCA1P28370 1054 aa19.08■□□□□ 0.64
SNX27-203ENST00000368843 HEATR6Q6AI08 1181 aaKnown RBP19.08■□□□□ 0.64
SNX27-203ENST00000368843 KRT80Q6KB66 452 aa19.08■□□□□ 0.64
SNX27-203ENST00000368843 TUBB6Q9BUF5 446 aa19.08■□□□□ 0.64
SNX27-203ENST00000368843 TJP2Q9UDY2 1190 aa19.08■□□□□ 0.64
SNX27-203ENST00000368843 DIS3Q9Y2L1 958 aaKnown RBP19.08■□□□□ 0.64
SNX27-203ENST00000368843 SYNGAP1Q96PV0 1343 aa19.08■□□□□ 0.64
SNX27-203ENST00000368843 ZNF564Q8TBZ8 553 aaPredicted RBP19.08■□□□□ 0.64
SNX27-203ENST00000368843 RAPGEF5Q92565 580 aa19.08■□□□□ 0.64
SNX27-203ENST00000368843 YIPF2Q9BWQ6 316 aa19.08■□□□□ 0.64
SNX27-203ENST00000368843 TXNP10599 105 aaKnown RBP19.07■□□□□ 0.64
SNX27-203ENST00000368843 ADCY2Q08462 1091 aa19.07■□□□□ 0.64
SNX27-203ENST00000368843 TFDP2Q14188 446 aa19.07■□□□□ 0.64
SNX27-203ENST00000368843 NECTIN1Q15223 517 aa19.07■□□□□ 0.64
SNX27-203ENST00000368843 FAM102AQ5T9C2 384 aaPredicted RBP19.07■□□□□ 0.64
SNX27-203ENST00000368843 CEP19Q96LK0 163 aa19.07■□□□□ 0.64
SNX27-203ENST00000368843 INTS2Q9H0H0 1204 aaKnown RBP19.07■□□□□ 0.64
SNX27-203ENST00000368843 DHX35Q9H5Z1 703 aaKnown RBP19.07■□□□□ 0.64
SNX27-203ENST00000368843 LY9Q9HBG7 655 aa19.07■□□□□ 0.64
SNX27-203ENST00000368843 KCNQ2O43526 872 aa19.07■□□□□ 0.64
SNX27-203ENST00000368843 KRT37O76014 449 aa19.07■□□□□ 0.64
SNX27-203ENST00000368843 CTSHP09668 335 aa19.07■□□□□ 0.64
SNX27-203ENST00000368843 ESRRGP62508 458 aa19.07■□□□□ 0.64
SNX27-203ENST00000368843 TXNRD1Q16881 649 aa19.07■□□□□ 0.64
SNX27-203ENST00000368843 GPD1LQ8N335 351 aa19.07■□□□□ 0.64
SNX27-203ENST00000368843 TTC13Q8NBP0 860 aa19.07■□□□□ 0.64
SNX27-203ENST00000368843 CLCA2Q9UQC9 943 aa19.07■□□□□ 0.64
SNX27-203ENST00000368843 PRCPP42785 496 aa19.07■□□□□ 0.64
SNX27-203ENST00000368843 NUDT18Q6ZVK8 323 aa19.07■□□□□ 0.64
SNX27-203ENST00000368843 KDELC2Q7Z4H8 507 aa19.07■□□□□ 0.64
SNX27-203ENST00000368843 GSPT2Q8IYD1 628 aaKnown RBP19.07■□□□□ 0.64
SNX27-203ENST00000368843 IP6K2Q9UHH9 426 aa19.07■□□□□ 0.64
SNX27-203ENST00000368843 ZC3H4Q9UPT8 1303 aaKnown RBP19.07■□□□□ 0.64
SNX27-203ENST00000368843 ANKRD65E5RJM6 399 aa19.07■□□□□ 0.64
SNX27-203ENST00000368843 ZNF746Q6NUN9 644 aaPredicted RBP19.07■□□□□ 0.64
SNX27-203ENST00000368843 SP8Q8IXZ3 490 aa19.07■□□□□ 0.64
SNX27-203ENST00000368843 NEUROG2Q9H2A3 272 aa19.07■□□□□ 0.64
SNX27-203ENST00000368843 SMYD3Q9H7B4 428 aa19.07■□□□□ 0.64
SNX27-203ENST00000368843 CHD1O14646 1710 aa19.07■□□□□ 0.64
SNX27-203ENST00000368843 COPB2P35606 906 aa19.07■□□□□ 0.64
SNX27-203ENST00000368843 NAALADL2Q58DX5 795 aa19.07■□□□□ 0.64
SNX27-203ENST00000368843 PGBD3Q8N328 593 aa19.07■□□□□ 0.64
SNX27-203ENST00000368843 RMDN1Q96DB5 314 aa19.07■□□□□ 0.64
SNX27-203ENST00000368843 A0A0G2JND7 137 aa19.06■□□□□ 0.64
SNX27-203ENST00000368843 MFAP3LO75121 409 aa19.06■□□□□ 0.64
SNX27-203ENST00000368843 TADA2AO75478 443 aa19.06■□□□□ 0.64
SNX27-203ENST00000368843 ROR1Q01973 937 aa19.06■□□□□ 0.64
SNX27-203ENST00000368843 LRRC53A6NM62 1247 aa19.06■□□□□ 0.64
SNX27-203ENST00000368843 E2F6O75461 281 aa19.06■□□□□ 0.64
SNX27-203ENST00000368843 ANKRD40Q6AI12 368 aa19.06■□□□□ 0.64
SNX27-203ENST00000368843 TEKT4Q8WW24 435 aa19.06■□□□□ 0.64
SNX27-203ENST00000368843 KLHL29Q96CT2 875 aa19.06■□□□□ 0.64
SNX27-203ENST00000368843 LCMT1Q9UIC8 334 aa19.06■□□□□ 0.64
SNX27-203ENST00000368843 PODXLO00592 558 aa19.06■□□□□ 0.64
SNX27-203ENST00000368843 PRAMEP78395 509 aa19.06■□□□□ 0.64
SNX27-203ENST00000368843 TAF1CQ15572 869 aaPredicted RBP19.06■□□□□ 0.64
SNX27-203ENST00000368843 POLR3CQ9BUI4 534 aaPredicted RBP19.06■□□□□ 0.64
SNX27-203ENST00000368843 ACAD11Q709F0 780 aa19.06■□□□□ 0.64
SNX27-203ENST00000368843 PROM2Q8N271 834 aa19.06■□□□□ 0.64
SNX27-203ENST00000368843 PPP1R36Q96LQ0 422 aa19.06■□□□□ 0.64
SNX27-203ENST00000368843 JPH1Q9HDC5 661 aaPredicted RBP19.06■□□□□ 0.64
SNX27-203ENST00000368843 AGO2Q9UKV8 859 aaKnown RBP19.06■□□□□ 0.64
SNX27-203ENST00000368843 CUL1Q13616 776 aa19.06■□□□□ 0.64
SNX27-203ENST00000368843 RFX8Q6ZV50 586 aa19.06■□□□□ 0.64
SNX27-203ENST00000368843 BARHL2Q9NY43 387 aa19.06■□□□□ 0.64
SNX27-203ENST00000368843 ZNF500O60304 480 aaPredicted RBP19.05■□□□□ 0.64
SNX27-203ENST00000368843 IRF1P10914 325 aa19.05■□□□□ 0.64
SNX27-203ENST00000368843 POLE2P56282 527 aa19.05■□□□□ 0.64
SNX27-203ENST00000368843 ZNF235Q14590 738 aa19.05■□□□□ 0.64
SNX27-203ENST00000368843 SMIM5Q71RC9 77 aa19.05■□□□□ 0.64
SNX27-203ENST00000368843 MLXIPLQ9NP71 852 aa19.05■□□□□ 0.64
SNX27-203ENST00000368843 PYGLP06737 847 aa19.05■□□□□ 0.64
SNX27-203ENST00000368843 YWHABP31946 246 aaKnown RBP19.05■□□□□ 0.64
SNX27-203ENST00000368843 RNF149Q8NC42 400 aa19.05■□□□□ 0.64
SNX27-203ENST00000368843 CASS4Q9NQ75 786 aa19.05■□□□□ 0.64
SNX27-203ENST00000368843 CNOT7Q9UIV1 285 aaKnown RBP19.05■□□□□ 0.64
SNX27-203ENST00000368843 SYF2O95926 243 aaKnown RBP19.05■□□□□ 0.64
SNX27-203ENST00000368843 ATP1A3P13637 1013 aa19.05■□□□□ 0.64
SNX27-203ENST00000368843 SYCP2LQ5T4T6 812 aa19.05■□□□□ 0.64
SNX27-203ENST00000368843 FAM117BQ6P1L5 589 aa19.05■□□□□ 0.64
SNX27-203ENST00000368843 PLAAQ9Y263 795 aa19.05■□□□□ 0.64
SNX27-203ENST00000368843 SNX24Q9Y343 169 aa19.05■□□□□ 0.64
SNX27-203ENST00000368843 OCM2P0CE71 109 aa19.05■□□□□ 0.64
SNX27-203ENST00000368843 OCMP0CE72 109 aaPredicted RBP19.05■□□□□ 0.64
SNX27-203ENST00000368843 R3HDM1Q15032 1099 aaKnown RBP19.05■□□□□ 0.64
SNX27-203ENST00000368843 NR1H4Q96RI1 486 aaPredicted RBP19.05■□□□□ 0.64
SNX27-203ENST00000368843 FGFR1OP2Q9NVK5 253 aa19.05■□□□□ 0.64
SNX27-203ENST00000368843 KPNA7A9QM74 516 aa19.05■□□□□ 0.64
SNX27-203ENST00000368843 MAPK13O15264 365 aa19.05■□□□□ 0.64
SNX27-203ENST00000368843 ASMTLO95671 621 aa19.05■□□□□ 0.64
SNX27-203ENST00000368843 ZNF560Q96MR9 790 aa19.05■□□□□ 0.64
SNX27-203ENST00000368843 DDX50Q9BQ39 737 aaKnown RBP19.05■□□□□ 0.64
SNX27-203ENST00000368843 CYBBP04839 570 aa19.05■□□□□ 0.64
SNX27-203ENST00000368843 SULT1E1P49888 294 aa19.05■□□□□ 0.64
SNX27-203ENST00000368843 SPON1Q9HCB6 807 aa19.05■□□□□ 0.64
SNX27-203ENST00000368843 KIF17Q9P2E2 1029 aa19.05■□□□□ 0.64
SNX27-203ENST00000368843 CAPN11Q9UMQ6 739 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms