RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 GLB1LQ6UWU2 654 aa20.44■□□□□ 0.86
CHTOP-202ENST00000368687 CCDC73Q6ZRK6 1079 aa20.44■□□□□ 0.86
CHTOP-202ENST00000368687 APBB1IPQ7Z5R6 666 aaPredicted RBP20.44■□□□□ 0.86
CHTOP-202ENST00000368687 RNF169Q8NCN4 708 aa20.44■□□□□ 0.86
CHTOP-202ENST00000368687 LARP4BQ92615 738 aaKnown RBP20.44■□□□□ 0.86
CHTOP-202ENST00000368687 SYMPKQ92797 1274 aaKnown RBP20.44■□□□□ 0.86
CHTOP-202ENST00000368687 RUSC1Q9BVN2 902 aa20.44■□□□□ 0.86
CHTOP-202ENST00000368687 TRIM6Q9C030 488 aaPredicted RBP20.44■□□□□ 0.86
CHTOP-202ENST00000368687 LMAN2LQ9H0V9 348 aa20.44■□□□□ 0.86
CHTOP-202ENST00000368687 FZD8Q9H461 694 aa20.44■□□□□ 0.86
CHTOP-202ENST00000368687 PCDHB2Q9Y5E7 798 aa20.44■□□□□ 0.86
CHTOP-202ENST00000368687 PCDHB12Q9Y5F1 795 aa20.44■□□□□ 0.86
CHTOP-202ENST00000368687 LAG3P18627 525 aa20.43■□□□□ 0.86
CHTOP-202ENST00000368687 ABCD1P33897 745 aa20.43■□□□□ 0.86
CHTOP-202ENST00000368687 SMTNP53814 917 aa20.43■□□□□ 0.86
CHTOP-202ENST00000368687 GRIN1Q05586 938 aa20.43■□□□□ 0.86
CHTOP-202ENST00000368687 KARSQ15046 597 aaKnown RBP20.43■□□□□ 0.86
CHTOP-202ENST00000368687 AMHR2Q16671 573 aa20.43■□□□□ 0.86
CHTOP-202ENST00000368687 PAN2Q504Q3 1202 aaKnown RBP20.43■□□□□ 0.86
CHTOP-202ENST00000368687 SLC27A1Q6PCB7 646 aa20.43■□□□□ 0.86
CHTOP-202ENST00000368687 RAD54LQ92698 747 aa20.43■□□□□ 0.86
CHTOP-202ENST00000368687 LARSQ9P2J5 1176 aaKnown RBP20.43■□□□□ 0.86
CHTOP-202ENST00000368687 MRPL42Q9Y6G3 142 aaKnown RBP20.43■□□□□ 0.86
CHTOP-202ENST00000368687 KIAA1671Q9BY89 1806 aa20.43■□□□□ 0.86
CHTOP-202ENST00000368687 ZMYM2Q9UBW7 1377 aa20.43■□□□□ 0.86
CHTOP-202ENST00000368687 A0A1B0GUA9 196 aa20.42■□□□□ 0.86
CHTOP-202ENST00000368687 ACKR2O00590 384 aa20.42■□□□□ 0.86
CHTOP-202ENST00000368687 N4BP3O15049 544 aa20.42■□□□□ 0.86
CHTOP-202ENST00000368687 BRD1O95696 1058 aa20.42■□□□□ 0.86
CHTOP-202ENST00000368687 PRKCBP05771 671 aa20.42■□□□□ 0.86
CHTOP-202ENST00000368687 FGFR1P11362 822 aa20.42■□□□□ 0.86
CHTOP-202ENST00000368687 ATF7P17544 494 aaPredicted RBP20.42■□□□□ 0.86
CHTOP-202ENST00000368687 ARF4P18085 180 aaPredicted RBP20.42■□□□□ 0.86
CHTOP-202ENST00000368687 NCLP19338 710 aaKnown RBP20.42■□□□□ 0.86
CHTOP-202ENST00000368687 DDIT3P35638 169 aa20.42■□□□□ 0.86
CHTOP-202ENST00000368687 PRPF4BQ13523 1007 aaKnown RBP20.42■□□□□ 0.86
CHTOP-202ENST00000368687 SPOUT1Q5T280 376 aaKnown RBP20.42■□□□□ 0.86
CHTOP-202ENST00000368687 MRPL10Q7Z7H8 261 aaKnown RBP20.42■□□□□ 0.86
CHTOP-202ENST00000368687 GDPD5Q8WTR4 605 aa20.42■□□□□ 0.86
CHTOP-202ENST00000368687 SPIRE2Q8WWL2 714 aa20.42■□□□□ 0.86
CHTOP-202ENST00000368687 BSNDQ8WZ55 320 aa20.42■□□□□ 0.86
CHTOP-202ENST00000368687 EPSTI1Q96J88 318 aa20.42■□□□□ 0.86
CHTOP-202ENST00000368687 PLIN2Q99541 437 aa20.42■□□□□ 0.86
CHTOP-202ENST00000368687 ADPGKQ9BRR6 497 aa20.42■□□□□ 0.86
CHTOP-202ENST00000368687 TMEM134Q9H6X4 195 aa20.42■□□□□ 0.86
CHTOP-202ENST00000368687 PRRC2BQ5JSZ5 2229 aaKnown RBP20.41■□□□□ 0.86
CHTOP-202ENST00000368687 CUL9Q8IWT3 2517 aa20.41■□□□□ 0.86
CHTOP-202ENST00000368687 CCDC169A6NNP5 214 aa20.41■□□□□ 0.86
CHTOP-202ENST00000368687 K7ERI5 159 aa20.41■□□□□ 0.86
CHTOP-202ENST00000368687 LINC00271P0C7V0 271 aa20.41■□□□□ 0.86
CHTOP-202ENST00000368687 PLS3P13797 630 aa20.41■□□□□ 0.86
CHTOP-202ENST00000368687 PPM1AP35813 382 aa20.41■□□□□ 0.86
CHTOP-202ENST00000368687 NPTX2P47972 431 aa20.41■□□□□ 0.86
CHTOP-202ENST00000368687 PEX3P56589 373 aa20.41■□□□□ 0.86
CHTOP-202ENST00000368687 GPM6BQ13491 265 aa20.41■□□□□ 0.86
CHTOP-202ENST00000368687 TMEM132AQ24JP5 1023 aa20.41■□□□□ 0.86
CHTOP-202ENST00000368687 FOXD4L5Q5VV16 416 aaPredicted RBP20.41■□□□□ 0.86
CHTOP-202ENST00000368687 RRAGBQ5VZM2 374 aa20.41■□□□□ 0.86
CHTOP-202ENST00000368687 GPBP1Q86WP2 473 aa20.41■□□□□ 0.86
CHTOP-202ENST00000368687 URGCPQ8TCY9 931 aa20.41■□□□□ 0.86
CHTOP-202ENST00000368687 FOXD4L4Q8WXT5 416 aaPredicted RBP20.41■□□□□ 0.86
CHTOP-202ENST00000368687 PPM1EQ8WY54 764 aa20.41■□□□□ 0.86
CHTOP-202ENST00000368687 CASD1Q96PB1 797 aa20.41■□□□□ 0.86
CHTOP-202ENST00000368687 NTPCRQ9BSD7 190 aaKnown RBP20.41■□□□□ 0.86
CHTOP-202ENST00000368687 CCDC113Q9H0I3 377 aa20.41■□□□□ 0.86
CHTOP-202ENST00000368687 KMT5AQ9NQR1 393 aa20.41■□□□□ 0.86
CHTOP-202ENST00000368687 PRDM6Q9NQX0 595 aa20.41■□□□□ 0.86
CHTOP-202ENST00000368687 BLOC1S4Q9NUP1 217 aa20.41■□□□□ 0.86
CHTOP-202ENST00000368687 KANSL3Q9P2N6 904 aa20.41■□□□□ 0.86
CHTOP-202ENST00000368687 MTCH2Q9Y6C9 303 aa20.41■□□□□ 0.86
CHTOP-202ENST00000368687 DLL1O00548 723 aa20.4■□□□□ 0.86
CHTOP-202ENST00000368687 LPXNO60711 386 aa20.4■□□□□ 0.86
CHTOP-202ENST00000368687 CUTAO60888 179 aa20.4■□□□□ 0.86
CHTOP-202ENST00000368687 KRT18P05783 430 aaKnown RBP20.4■□□□□ 0.86
CHTOP-202ENST00000368687 UBE3AQ05086 875 aa20.4■□□□□ 0.86
CHTOP-202ENST00000368687 MAPK7Q13164 816 aa20.4■□□□□ 0.86
CHTOP-202ENST00000368687 PKP1Q13835 747 aa20.4■□□□□ 0.86
CHTOP-202ENST00000368687 TIGD5Q53EQ6 642 aa20.4■□□□□ 0.86
CHTOP-202ENST00000368687 CLLU1OSQ5K130 101 aa20.4■□□□□ 0.86
CHTOP-202ENST00000368687 DAW1Q8N136 415 aa20.4■□□□□ 0.86
CHTOP-202ENST00000368687 MRPL38Q96DV4 380 aaKnown RBP20.4■□□□□ 0.86
CHTOP-202ENST00000368687 CLIC6Q96NY7 704 aa20.4■□□□□ 0.86
CHTOP-202ENST00000368687 RNF19AQ9NV58 838 aa20.4■□□□□ 0.86
CHTOP-202ENST00000368687 ARHGAP28Q9P2N2 729 aa20.4■□□□□ 0.86
CHTOP-202ENST00000368687 TFIP11Q9UBB9 837 aaKnown RBP20.4■□□□□ 0.86
CHTOP-202ENST00000368687 TBCAO75347 108 aaKnown RBP20.39■□□□□ 0.85
CHTOP-202ENST00000368687 ITGA4P13612 1032 aa20.39■□□□□ 0.85
CHTOP-202ENST00000368687 STAT6P42226 847 aa20.39■□□□□ 0.85
CHTOP-202ENST00000368687 GATMP50440 423 aa20.39■□□□□ 0.85
CHTOP-202ENST00000368687 KRT85P78386 507 aa20.39■□□□□ 0.85
CHTOP-202ENST00000368687 CCDC85BQ15834 202 aaPredicted RBP20.39■□□□□ 0.85
CHTOP-202ENST00000368687 DCAF4L1Q3SXM0 396 aa20.39■□□□□ 0.85
CHTOP-202ENST00000368687 NOMO2Q5JPE7 1267 aa20.39■□□□□ 0.85
CHTOP-202ENST00000368687 SPECC1Q5M775 1068 aa20.39■□□□□ 0.85
CHTOP-202ENST00000368687 UBXN11Q5T124 520 aa20.39■□□□□ 0.85
CHTOP-202ENST00000368687 HELQQ8TDG4 1101 aa20.39■□□□□ 0.85
CHTOP-202ENST00000368687 KCNN1Q92952 543 aa20.39■□□□□ 0.85
CHTOP-202ENST00000368687 CPB2Q96IY4 423 aa20.39■□□□□ 0.85
CHTOP-202ENST00000368687 PYM1Q9BRP8 204 aaKnown RBP20.39■□□□□ 0.85
CHTOP-202ENST00000368687 CUEDC2Q9H467 287 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms