RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 VN1R3Q9BXE9 311 aa17.89■□□□□ 0.45
CKS1B-202ENST00000368436 CDH22Q9UJ99 828 aa17.89■□□□□ 0.45
CKS1B-202ENST00000368436 NR2E1Q9Y466 385 aa17.89■□□□□ 0.45
CKS1B-202ENST00000368436 MYO10Q9HD67 2058 aa17.89■□□□□ 0.45
CKS1B-202ENST00000368436 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.88■□□□□ 0.45
CKS1B-202ENST00000368436 ZBTB39O15060 712 aa17.88■□□□□ 0.45
CKS1B-202ENST00000368436 DDHD2O94830 711 aa17.88■□□□□ 0.45
CKS1B-202ENST00000368436 KRT2P35908 639 aa17.88■□□□□ 0.45
CKS1B-202ENST00000368436 MTHFRP42898 656 aa17.88■□□□□ 0.45
CKS1B-202ENST00000368436 AFF1P51825 1210 aaKnown RBP17.88■□□□□ 0.45
CKS1B-202ENST00000368436 NR5A1Q13285 461 aa17.88■□□□□ 0.45
CKS1B-202ENST00000368436 CTTNQ14247 550 aaKnown RBP17.88■□□□□ 0.45
CKS1B-202ENST00000368436 EMC2Q15006 297 aa17.88■□□□□ 0.45
CKS1B-202ENST00000368436 XKR9Q5GH70 373 aa17.88■□□□□ 0.45
CKS1B-202ENST00000368436 FBXL6Q8N531 539 aa17.88■□□□□ 0.45
CKS1B-202ENST00000368436 URGCPQ8TCY9 931 aa17.88■□□□□ 0.45
CKS1B-202ENST00000368436 POMKQ9H5K3 350 aa17.88■□□□□ 0.45
CKS1B-202ENST00000368436 RSAD1Q9HA92 442 aa17.88■□□□□ 0.45
CKS1B-202ENST00000368436 DZANK1Q9NVP4 752 aa17.88■□□□□ 0.45
CKS1B-202ENST00000368436 CNTNAP2Q9UHC6 1331 aa17.88■□□□□ 0.45
CKS1B-202ENST00000368436 DENND4AQ7Z401 1863 aa17.87■□□□□ 0.45
CKS1B-202ENST00000368436 LYPLA2O95372 231 aa17.87■□□□□ 0.45
CKS1B-202ENST00000368436 NCLP19338 710 aaKnown RBP17.87■□□□□ 0.45
CKS1B-202ENST00000368436 CA8P35219 290 aa17.87■□□□□ 0.45
CKS1B-202ENST00000368436 CYP4A11Q02928 519 aa17.87■□□□□ 0.45
CKS1B-202ENST00000368436 PCBP1Q15365 356 aaKnown RBP eCLIP17.87■□□□□ 0.45
CKS1B-202ENST00000368436 ME3Q16798 604 aa17.87■□□□□ 0.45
CKS1B-202ENST00000368436 IER5LQ5T953 404 aa17.87■□□□□ 0.45
CKS1B-202ENST00000368436 SUGP1Q8IWZ8 645 aaKnown RBP17.87■□□□□ 0.45
CKS1B-202ENST00000368436 NECAB1Q8N987 351 aa17.87■□□□□ 0.45
CKS1B-202ENST00000368436 RNF149Q8NC42 400 aa17.87■□□□□ 0.45
CKS1B-202ENST00000368436 CNNM3Q8NE01 707 aa17.87■□□□□ 0.45
CKS1B-202ENST00000368436 RIPOR3Q96MK2 946 aa17.87■□□□□ 0.45
CKS1B-202ENST00000368436 MTRQ99707 1265 aa17.87■□□□□ 0.45
CKS1B-202ENST00000368436 HSD17B14Q9BPX1 270 aa17.87■□□□□ 0.45
CKS1B-202ENST00000368436 TMEM175Q9BSA9 504 aa17.87■□□□□ 0.45
CKS1B-202ENST00000368436 GBP3Q9H0R5 595 aa17.87■□□□□ 0.45
CKS1B-202ENST00000368436 XPNPEP1Q9NQW7 623 aa17.87■□□□□ 0.45
CKS1B-202ENST00000368436 BMP2KQ9NSY1 1161 aaPredicted RBP17.87■□□□□ 0.45
CKS1B-202ENST00000368436 KANSL3Q9P2N6 904 aa17.87■□□□□ 0.45
CKS1B-202ENST00000368436 STK39Q9UEW8 545 aa17.87■□□□□ 0.45
CKS1B-202ENST00000368436 ALDH2P05091 517 aa17.86■□□□□ 0.45
CKS1B-202ENST00000368436 EPCAMP16422 314 aa17.86■□□□□ 0.45
CKS1B-202ENST00000368436 MRE11P49959 708 aa17.86■□□□□ 0.45
CKS1B-202ENST00000368436 POU5F1BQ06416 359 aa17.86■□□□□ 0.45
CKS1B-202ENST00000368436 MXD4Q14582 209 aaPredicted RBP17.86■□□□□ 0.45
CKS1B-202ENST00000368436 PTPN14Q15678 1187 aa17.86■□□□□ 0.45
CKS1B-202ENST00000368436 RARS2Q5T160 578 aaKnown RBP17.86■□□□□ 0.45
CKS1B-202ENST00000368436 PPFIBP1Q86W92 1011 aa17.86■□□□□ 0.45
CKS1B-202ENST00000368436 IFNLR1Q8IU57 520 aaPredicted RBP17.86■□□□□ 0.45
CKS1B-202ENST00000368436 TPH2Q8IWU9 490 aa17.86■□□□□ 0.45
CKS1B-202ENST00000368436 C12orf76Q8N812 135 aaPredicted RBP17.86■□□□□ 0.45
CKS1B-202ENST00000368436 SMG8Q8ND04 991 aaKnown RBP17.86■□□□□ 0.45
CKS1B-202ENST00000368436 PRSS33Q8NF86 280 aa17.86■□□□□ 0.45
CKS1B-202ENST00000368436 GTF3C6Q969F1 213 aa17.86■□□□□ 0.45
CKS1B-202ENST00000368436 PRRX2Q99811 253 aa17.86■□□□□ 0.45
CKS1B-202ENST00000368436 EIF2AK1Q9BQI3 630 aaKnown RBP17.86■□□□□ 0.45
CKS1B-202ENST00000368436 UBN1Q9NPG3 1134 aa17.86■□□□□ 0.45
CKS1B-202ENST00000368436 PCDHA12Q9UN75 941 aa17.86■□□□□ 0.45
CKS1B-202ENST00000368436 TDRD15B5MCY1 1934 aaKnown RBP17.86■□□□□ 0.45
CKS1B-202ENST00000368436 C2CD4DB7Z1M9 353 aa17.85■□□□□ 0.45
CKS1B-202ENST00000368436 INPPL1O15357 1258 aa17.85■□□□□ 0.45
CKS1B-202ENST00000368436 LILRB3O75022 631 aa17.85■□□□□ 0.45
CKS1B-202ENST00000368436 LARGE1O95461 756 aa17.85■□□□□ 0.45
CKS1B-202ENST00000368436 SP100P23497 879 aaPredicted RBP17.85■□□□□ 0.45
CKS1B-202ENST00000368436 AXLP30530 894 aa17.85■□□□□ 0.45
CKS1B-202ENST00000368436 PTENP60484 403 aa17.85■□□□□ 0.45
CKS1B-202ENST00000368436 ATAT1Q5SQI0 421 aa17.85■□□□□ 0.45
CKS1B-202ENST00000368436 KIAA1841Q6NSI8 718 aa17.85■□□□□ 0.45
CKS1B-202ENST00000368436 KANK3Q6NY19 840 aa17.85■□□□□ 0.45
CKS1B-202ENST00000368436 TMEM87AQ8NBN3 555 aa17.85■□□□□ 0.45
CKS1B-202ENST00000368436 NSUN7Q8NE18 718 aaKnown RBP17.85■□□□□ 0.45
CKS1B-202ENST00000368436 KLHL5Q96PQ7 755 aa17.85■□□□□ 0.45
CKS1B-202ENST00000368436 BRMS1Q9HCU9 246 aa17.85■□□□□ 0.45
CKS1B-202ENST00000368436 ANKEF1Q9NU02 776 aa17.85■□□□□ 0.45
CKS1B-202ENST00000368436 FAN1Q9Y2M0 1017 aa17.85■□□□□ 0.45
CKS1B-202ENST00000368436 WDFY4Q6ZS81 3184 aa17.85■□□□□ 0.45
CKS1B-202ENST00000368436 BTBD18B2RXH4 712 aa17.84■□□□□ 0.45
CKS1B-202ENST00000368436 NRP1O14786 923 aa17.84■□□□□ 0.45
CKS1B-202ENST00000368436 TSPAN1O60635 241 aa17.84■□□□□ 0.45
CKS1B-202ENST00000368436 ERLIN2O94905 339 aa17.84■□□□□ 0.45
CKS1B-202ENST00000368436 POMCP01189 267 aa17.84■□□□□ 0.45
CKS1B-202ENST00000368436 WEE2P0C1S8 567 aa17.84■□□□□ 0.45
CKS1B-202ENST00000368436 ARL2P36404 184 aa17.84■□□□□ 0.45
CKS1B-202ENST00000368436 CALCRLQ16602 461 aa17.84■□□□□ 0.45
CKS1B-202ENST00000368436 ZDHHC14Q8IZN3 488 aa17.84■□□□□ 0.45
CKS1B-202ENST00000368436 KREMEN2Q8NCW0 462 aa17.84■□□□□ 0.45
CKS1B-202ENST00000368436 CCDC51Q96ER9 411 aa17.84■□□□□ 0.45
CKS1B-202ENST00000368436 FAM193BQ96PV7 902 aaPredicted RBP17.84■□□□□ 0.45
CKS1B-202ENST00000368436 EIF2AQ9BY44 585 aaKnown RBP17.84■□□□□ 0.45
CKS1B-202ENST00000368436 TTC12Q9H892 705 aaPredicted RBP17.84■□□□□ 0.45
CKS1B-202ENST00000368436 TSHZ2Q9NRE2 1034 aa17.84■□□□□ 0.45
CKS1B-202ENST00000368436 SORCS3Q9UPU3 1222 aa17.84■□□□□ 0.45
CKS1B-202ENST00000368436 IPPQ9Y573 584 aa17.84■□□□□ 0.45
CKS1B-202ENST00000368436 C2orf16Q68DN1 1984 aa17.84■□□□□ 0.45
CKS1B-202ENST00000368436 DGAT1O75907 488 aa17.83■□□□□ 0.44
CKS1B-202ENST00000368436 EFEMP2O95967 443 aa17.83■□□□□ 0.44
CKS1B-202ENST00000368436 ITGA4P13612 1032 aa17.83■□□□□ 0.44
CKS1B-202ENST00000368436 KCNA4P22459 653 aa17.83■□□□□ 0.44
CKS1B-202ENST00000368436 PTPN5P54829 565 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms