RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 ARID2Q68CP9 1835 aa18.96■□□□□ 0.63
LMNA-205ENST00000368299 SYNGAP1Q96PV0 1343 aa18.96■□□□□ 0.63
LMNA-205ENST00000368299 A0A0A6YYK5 440 aaPredicted RBP18.96■□□□□ 0.63
LMNA-205ENST00000368299 H2AFZP0C0S5 128 aa18.96■□□□□ 0.63
LMNA-205ENST00000368299 PAFAH1B1P43034 410 aa18.96■□□□□ 0.63
LMNA-205ENST00000368299 MXI1P50539 228 aa18.96■□□□□ 0.63
LMNA-205ENST00000368299 PPIL2Q13356 520 aa18.96■□□□□ 0.63
LMNA-205ENST00000368299 NEDD9Q14511 834 aa18.96■□□□□ 0.63
LMNA-205ENST00000368299 PHLDB3Q6NSJ2 640 aa18.96■□□□□ 0.63
LMNA-205ENST00000368299 CCDC70Q6NSX1 233 aa18.96■□□□□ 0.63
LMNA-205ENST00000368299 H2AFVQ71UI9 128 aa18.96■□□□□ 0.63
LMNA-205ENST00000368299 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.96■□□□□ 0.63
LMNA-205ENST00000368299 KCNN1Q92952 543 aa18.96■□□□□ 0.63
LMNA-205ENST00000368299 CDCA5Q96FF9 252 aa18.96■□□□□ 0.63
LMNA-205ENST00000368299 GPR88Q9GZN0 384 aa18.96■□□□□ 0.63
LMNA-205ENST00000368299 ASCC2Q9H1I8 757 aaPredicted RBP18.96■□□□□ 0.63
LMNA-205ENST00000368299 ANKRD63C9JTQ0 380 aa18.95■□□□□ 0.62
LMNA-205ENST00000368299 OATP04181 439 aa18.95■□□□□ 0.62
LMNA-205ENST00000368299 C1orf220Q5T0J3 134 aa18.95■□□□□ 0.62
LMNA-205ENST00000368299 CCDC181Q5TID7 509 aa18.95■□□□□ 0.62
LMNA-205ENST00000368299 SLC30A5Q8TAD4 765 aa18.95■□□□□ 0.62
LMNA-205ENST00000368299 FBXL18Q96ME1 805 aa18.95■□□□□ 0.62
LMNA-205ENST00000368299 KIFC3Q9BVG8 833 aa18.95■□□□□ 0.62
LMNA-205ENST00000368299 ARHGAP28Q9P2N2 729 aa18.95■□□□□ 0.62
LMNA-205ENST00000368299 TELO2Q9Y4R8 837 aa18.95■□□□□ 0.62
LMNA-205ENST00000368299 IGKV6D-21A0A0A0MT36 114 aa18.95■□□□□ 0.62
LMNA-205ENST00000368299 PDE2AO00408 941 aaPredicted RBP18.95■□□□□ 0.62
LMNA-205ENST00000368299 DDX3XO00571 662 aaKnown RBP eCLIP18.95■□□□□ 0.629e-21■■■□□ 16.5
LMNA-205ENST00000368299 GARTP22102 1010 aa18.95■□□□□ 0.62
LMNA-205ENST00000368299 GCLMP48507 274 aa18.95■□□□□ 0.62
LMNA-205ENST00000368299 POLGP54098 1239 aaPredicted RBP18.95■□□□□ 0.62
LMNA-205ENST00000368299 LONRF2Q1L5Z9 754 aa18.95■□□□□ 0.62
LMNA-205ENST00000368299 NFRKBQ6P4R8 1299 aa18.95■□□□□ 0.62
LMNA-205ENST00000368299 TMC2Q8TDI7 906 aa18.95■□□□□ 0.62
LMNA-205ENST00000368299 COG1Q8WTW3 980 aa18.95■□□□□ 0.62
LMNA-205ENST00000368299 SYT17Q9BSW7 474 aa18.95■□□□□ 0.62
LMNA-205ENST00000368299 POLR3FQ9H1D9 316 aaPredicted RBP18.95■□□□□ 0.62
LMNA-205ENST00000368299 MYH10P35580 1976 aa18.94■□□□□ 0.62
LMNA-205ENST00000368299 SOWAHBA6NEL2 793 aa18.94■□□□□ 0.62
LMNA-205ENST00000368299 SMC1AQ14683 1233 aaKnown RBP18.94■□□□□ 0.62
LMNA-205ENST00000368299 KIF22Q14807 665 aa18.94■□□□□ 0.62
LMNA-205ENST00000368299 EMC2Q15006 297 aa18.94■□□□□ 0.62
LMNA-205ENST00000368299 MTERF2Q49AM1 385 aa18.94■□□□□ 0.62
LMNA-205ENST00000368299 MEI1Q5TIA1 1274 aa18.94■□□□□ 0.62
LMNA-205ENST00000368299 LMBR1Q8WVP7 490 aa18.94■□□□□ 0.62
LMNA-205ENST00000368299 PAGR1Q9BTK6 254 aa18.94■□□□□ 0.62
LMNA-205ENST00000368299 NIFKQ9BYG3 293 aaKnown RBP18.94■□□□□ 0.62
LMNA-205ENST00000368299 HNRNPDLO14979 420 aaKnown RBP18.94■□□□□ 0.62
LMNA-205ENST00000368299 ADRB2P07550 413 aa18.94■□□□□ 0.62
LMNA-205ENST00000368299 UBA1P22314 1058 aaKnown RBP18.94■□□□□ 0.62
LMNA-205ENST00000368299 GTF2H1P32780 548 aa18.94■□□□□ 0.62
LMNA-205ENST00000368299 SOX10P56693 466 aa18.94■□□□□ 0.62
LMNA-205ENST00000368299 FSTL1Q12841 308 aa18.94■□□□□ 0.62
LMNA-205ENST00000368299 TTLL12Q14166 644 aaPredicted RBP18.94■□□□□ 0.62
LMNA-205ENST00000368299 KRT39Q6A163 491 aa18.94■□□□□ 0.62
LMNA-205ENST00000368299 FASTKD5Q7L8L6 764 aaKnown RBP18.94■□□□□ 0.62
LMNA-205ENST00000368299 CBWD2Q8IUF1 395 aa18.94■□□□□ 0.62
LMNA-205ENST00000368299 MMGT1Q8N4V1 131 aa18.94■□□□□ 0.62
LMNA-205ENST00000368299 PLEKHO2Q8TD55 490 aa18.94■□□□□ 0.62
LMNA-205ENST00000368299 PARD3BQ8TEW8 1205 aa18.94■□□□□ 0.62
LMNA-205ENST00000368299 POMGNT1Q8WZA1 660 aa18.94■□□□□ 0.62
LMNA-205ENST00000368299 CLMNQ96JQ2 1002 aa18.94■□□□□ 0.62
LMNA-205ENST00000368299 MFSD14AQ96MC6 490 aa18.94■□□□□ 0.62
LMNA-205ENST00000368299 SYT11Q9BT88 431 aa18.94■□□□□ 0.62
LMNA-205ENST00000368299 TMEM117Q9H0C3 514 aa18.94■□□□□ 0.62
LMNA-205ENST00000368299 DHX33Q9H6R0 707 aaKnown RBP18.94■□□□□ 0.62
LMNA-205ENST00000368299 UBE2TQ9NPD8 197 aaPredicted RBP18.94■□□□□ 0.62
LMNA-205ENST00000368299 UTRNP46939 3433 aa18.93■□□□□ 0.62
LMNA-205ENST00000368299 DOCK5Q9H7D0 1870 aa18.93■□□□□ 0.62
LMNA-205ENST00000368299 GOLGA8IPA6NC78 632 aa18.93■□□□□ 0.62
LMNA-205ENST00000368299 GOLGA8JA6NMD2 632 aa18.93■□□□□ 0.62
LMNA-205ENST00000368299 FARP2O94887 1054 aaPredicted RBP18.93■□□□□ 0.62
LMNA-205ENST00000368299 VSNL1P62760 191 aa18.93■□□□□ 0.62
LMNA-205ENST00000368299 ARHGAP44Q17R89 818 aa18.93■□□□□ 0.62
LMNA-205ENST00000368299 CFAP221Q4G0U5 840 aa18.93■□□□□ 0.62
LMNA-205ENST00000368299 BEND6Q5SZJ8 279 aaPredicted RBP18.93■□□□□ 0.62
LMNA-205ENST00000368299 U2AF1L4Q8WU68 220 aaKnown RBP18.93■□□□□ 0.62
LMNA-205ENST00000368299 SLC7A3Q8WY07 619 aa18.93■□□□□ 0.62
LMNA-205ENST00000368299 RUBCNQ92622 972 aa18.93■□□□□ 0.62
LMNA-205ENST00000368299 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.93■□□□□ 0.62
LMNA-205ENST00000368299 ADGRA3Q8IWK6 1321 aa18.93■□□□□ 0.62
LMNA-205ENST00000368299 GRID2IPA4D2P6 1211 aa18.93■□□□□ 0.62
LMNA-205ENST00000368299 MAP2K7O14733 419 aa18.93■□□□□ 0.62
LMNA-205ENST00000368299 NCK2O43639 380 aa18.93■□□□□ 0.62
LMNA-205ENST00000368299 SORBS3O60504 671 aa18.93■□□□□ 0.62
LMNA-205ENST00000368299 CNMDO75829 334 aa18.93■□□□□ 0.62
LMNA-205ENST00000368299 ATP4AP20648 1035 aa18.93■□□□□ 0.62
LMNA-205ENST00000368299 OAS2P29728 719 aaKnown RBP18.93■□□□□ 0.62
LMNA-205ENST00000368299 EPHX2P34913 555 aa18.93■□□□□ 0.62
LMNA-205ENST00000368299 FAM160B1Q5W0V3 765 aa18.93■□□□□ 0.62
LMNA-205ENST00000368299 KCNV1Q6PIU1 500 aa18.93■□□□□ 0.62
LMNA-205ENST00000368299 GPD1LQ8N335 351 aa18.93■□□□□ 0.62
LMNA-205ENST00000368299 ZSWIM2Q8NEG5 633 aa18.93■□□□□ 0.62
LMNA-205ENST00000368299 SPATA4Q8NEY3 305 aa18.93■□□□□ 0.62
LMNA-205ENST00000368299 KIAA1586Q9HCI6 787 aa18.93■□□□□ 0.62
LMNA-205ENST00000368299 TMEM8AQ9HCN3 771 aa18.93■□□□□ 0.62
LMNA-205ENST00000368299 NRBP2Q9NSY0 501 aa18.93■□□□□ 0.62
LMNA-205ENST00000368299 COQ4Q9Y3A0 265 aa18.93■□□□□ 0.62
LMNA-205ENST00000368299 MYH9P35579 1960 aaKnown RBP18.92■□□□□ 0.62
LMNA-205ENST00000368299 CES2O00748 559 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms