RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 NCKAP1LP55160 1127 aa20.59■□□□□ 0.89
LMNA-204ENST00000368298 NCBP1Q09161 790 aaKnown RBP20.59■□□□□ 0.89
LMNA-204ENST00000368298 GPR153Q6NV75 609 aa20.59■□□□□ 0.89
LMNA-204ENST00000368298 NPAS4Q8IUM7 802 aa20.59■□□□□ 0.89
LMNA-204ENST00000368298 TMEM87AQ8NBN3 555 aa20.59■□□□□ 0.89
LMNA-204ENST00000368298 TMEM161BQ8NDZ6 487 aa20.59■□□□□ 0.89
LMNA-204ENST00000368298 CCDC51Q96ER9 411 aa20.59■□□□□ 0.89
LMNA-204ENST00000368298 RAD9AQ99638 391 aa20.59■□□□□ 0.89
LMNA-204ENST00000368298 A0A1B0GUA9 196 aa20.58■□□□□ 0.89
LMNA-204ENST00000368298 H0YCG3 227 aa20.58■□□□□ 0.89
LMNA-204ENST00000368298 K7ERI5 159 aa20.58■□□□□ 0.89
LMNA-204ENST00000368298 ZNF623O75123 536 aa20.58■□□□□ 0.89
LMNA-204ENST00000368298 TBCAO75347 108 aaKnown RBP20.58■□□□□ 0.89
LMNA-204ENST00000368298 STAG3L1P0CL83 205 aa20.58■□□□□ 0.89
LMNA-204ENST00000368298 ARF4P18085 180 aaPredicted RBP20.58■□□□□ 0.89
LMNA-204ENST00000368298 SYKP43405 635 aa20.58■□□□□ 0.89
LMNA-204ENST00000368298 RAB30Q15771 203 aa20.58■□□□□ 0.89
LMNA-204ENST00000368298 DYMQ7RTS9 669 aa20.58■□□□□ 0.89
LMNA-204ENST00000368298 TMCO2Q7Z6W1 182 aaPredicted RBP20.58■□□□□ 0.89
LMNA-204ENST00000368298 FSIP1Q8NA03 581 aa20.58■□□□□ 0.89
LMNA-204ENST00000368298 LRCH3Q96II8 777 aa20.58■□□□□ 0.89
LMNA-204ENST00000368298 FIZ1Q96SL8 496 aa20.58■□□□□ 0.89
LMNA-204ENST00000368298 KIFC3Q9BVG8 833 aa20.58■□□□□ 0.89
LMNA-204ENST00000368298 TRIM9Q9C026 710 aa20.58■□□□□ 0.89
LMNA-204ENST00000368298 GOLPH3LQ9H4A5 285 aa20.58■□□□□ 0.89
LMNA-204ENST00000368298 TMEM161AQ9NX61 479 aa20.58■□□□□ 0.89
LMNA-204ENST00000368298 SEL1LQ9UBV2 794 aa20.58■□□□□ 0.89
LMNA-204ENST00000368298 CNTNAP2Q9UHC6 1331 aa20.58■□□□□ 0.88
LMNA-204ENST00000368298 COL4A6Q14031 1691 aa20.58■□□□□ 0.88
LMNA-204ENST00000368298 SLC16A4O15374 487 aa20.57■□□□□ 0.88
LMNA-204ENST00000368298 EOMESO95936 686 aa20.57■□□□□ 0.88
LMNA-204ENST00000368298 PRKCBP05771 671 aa20.57■□□□□ 0.88
LMNA-204ENST00000368298 MAPTP10636 758 aaKnown RBP20.57■□□□□ 0.88
LMNA-204ENST00000368298 SKIP12755 728 aa20.57■□□□□ 0.88
LMNA-204ENST00000368298 RAB27AP51159 221 aa20.57■□□□□ 0.88
LMNA-204ENST00000368298 LONRF3Q496Y0 759 aa20.57■□□□□ 0.88
LMNA-204ENST00000368298 NOTUMQ6P988 496 aa20.57■□□□□ 0.88
LMNA-204ENST00000368298 ECHDC2Q86YB7 292 aa20.57■□□□□ 0.88
LMNA-204ENST00000368298 MYCT1Q8N699 235 aa20.57■□□□□ 0.88
LMNA-204ENST00000368298 ZNF689Q96CS4 500 aaPredicted RBP20.57■□□□□ 0.88
LMNA-204ENST00000368298 C7orf25Q9BPX7 421 aa20.57■□□□□ 0.88
LMNA-204ENST00000368298 ST6GALNAC4Q9H4F1 302 aa20.57■□□□□ 0.88
LMNA-204ENST00000368298 RC3H2Q9HBD1 1191 aaKnown RBP20.57■□□□□ 0.88
LMNA-204ENST00000368298 SERTAD1Q9UHV2 236 aa20.57■□□□□ 0.88
LMNA-204ENST00000368298 INSL6Q9Y581 213 aa20.57■□□□□ 0.88
LMNA-204ENST00000368298 LAMA2P24043 3122 aaKnown RBP20.56■□□□□ 0.88
LMNA-204ENST00000368298 GOLGA6L4A6NEF3 574 aa20.56■□□□□ 0.88
LMNA-204ENST00000368298 B4GALT5O43286 388 aa20.56■□□□□ 0.88
LMNA-204ENST00000368298 DGKIO75912 1065 aa20.56■□□□□ 0.88
LMNA-204ENST00000368298 GAP43P17677 238 aa20.56■□□□□ 0.88
LMNA-204ENST00000368298 DNAJB2P25686 324 aa20.56■□□□□ 0.88
LMNA-204ENST00000368298 ABCD1P33897 745 aa20.56■□□□□ 0.88
LMNA-204ENST00000368298 RABGGTBP53611 331 aa20.56■□□□□ 0.88
LMNA-204ENST00000368298 UBXN11Q5T124 520 aa20.56■□□□□ 0.88
LMNA-204ENST00000368298 TWF2Q6IBS0 349 aaKnown RBP20.56■□□□□ 0.88
LMNA-204ENST00000368298 TAS1R3Q7RTX0 852 aa20.56■□□□□ 0.88
LMNA-204ENST00000368298 ZNF598Q86UK7 904 aaKnown RBP20.56■□□□□ 0.88
LMNA-204ENST00000368298 CEP57L1Q8IYX8 460 aa20.56■□□□□ 0.88
LMNA-204ENST00000368298 SLC17A8Q8NDX2 589 aa20.56■□□□□ 0.88
LMNA-204ENST00000368298 ZBED2Q9BTP6 218 aa20.56■□□□□ 0.88
LMNA-204ENST00000368298 MSRAQ9UJ68 235 aa20.56■□□□□ 0.88
LMNA-204ENST00000368298 PCDHB7Q9Y5E2 793 aa20.56■□□□□ 0.88
LMNA-204ENST00000368298 TMEM265A0A087WTH1 108 aa20.56■□□□□ 0.88
LMNA-204ENST00000368298 TLL1O43897 1013 aa20.56■□□□□ 0.88
LMNA-204ENST00000368298 UPP2O95045 317 aa20.56■□□□□ 0.88
LMNA-204ENST00000368298 PBX2P40425 430 aa20.56■□□□□ 0.88
LMNA-204ENST00000368298 PRPF4BQ13523 1007 aaKnown RBP20.56■□□□□ 0.88
LMNA-204ENST00000368298 HAUS6Q7Z4H7 955 aa20.56■□□□□ 0.88
LMNA-204ENST00000368298 MRPL10Q7Z7H8 261 aaKnown RBP20.56■□□□□ 0.88
LMNA-204ENST00000368298 SP7Q8TDD2 431 aaPredicted RBP20.56■□□□□ 0.88
LMNA-204ENST00000368298 STAMQ92783 540 aa20.56■□□□□ 0.88
LMNA-204ENST00000368298 OLFML3Q9NRN5 406 aa20.56■□□□□ 0.88
LMNA-204ENST00000368298 FAM105AQ9NUU6 356 aa20.56■□□□□ 0.88
LMNA-204ENST00000368298 YBX2Q9Y2T7 364 aaKnown RBP20.56■□□□□ 0.88
LMNA-204ENST00000368298 TTLL13PA6NNM8 815 aa20.55■□□□□ 0.88
LMNA-204ENST00000368298 ZNF202O95125 648 aa20.55■□□□□ 0.88
LMNA-204ENST00000368298 EDN1P05305 212 aa20.55■□□□□ 0.88
LMNA-204ENST00000368298 MYL1P05976 194 aa20.55■□□□□ 0.88
LMNA-204ENST00000368298 ATF7P17544 494 aaPredicted RBP20.55■□□□□ 0.88
LMNA-204ENST00000368298 FAM178BQ8IXR5 827 aa20.55■□□□□ 0.88
LMNA-204ENST00000368298 FMR1NBQ8N0W7 255 aaPredicted RBP20.55■□□□□ 0.88
LMNA-204ENST00000368298 ENGASEQ8NFI3 743 aa20.55■□□□□ 0.88
LMNA-204ENST00000368298 PAGE5Q96GU1 130 aa20.55■□□□□ 0.88
LMNA-204ENST00000368298 CPB2Q96IY4 423 aa20.55■□□□□ 0.88
LMNA-204ENST00000368298 GTF2BQ00403 316 aa20.54■□□□□ 0.88
LMNA-204ENST00000368298 NT5DC1Q5TFE4 455 aa20.54■□□□□ 0.88
LMNA-204ENST00000368298 SLC27A1Q6PCB7 646 aa20.54■□□□□ 0.88
LMNA-204ENST00000368298 KRBA2Q6ZNG9 492 aa20.54■□□□□ 0.88
LMNA-204ENST00000368298 ZNF720Q7Z2F6 126 aa20.54■□□□□ 0.88
LMNA-204ENST00000368298 SFR1Q86XK3 245 aa20.54■□□□□ 0.88
LMNA-204ENST00000368298 CCDC65Q8IXS2 484 aa20.54■□□□□ 0.88
LMNA-204ENST00000368298 CNNM3Q8NE01 707 aa20.54■□□□□ 0.88
LMNA-204ENST00000368298 GPT2Q8TD30 523 aa20.54■□□□□ 0.88
LMNA-204ENST00000368298 STRA6Q9BX79 667 aa20.54■□□□□ 0.88
LMNA-204ENST00000368298 ZHX3Q9H4I2 956 aa20.54■□□□□ 0.88
LMNA-204ENST00000368298 PANK4Q9NVE7 773 aa20.54■□□□□ 0.88
LMNA-204ENST00000368298 LRFN2Q9ULH4 789 aa20.54■□□□□ 0.88
LMNA-204ENST00000368298 PCDHB2Q9Y5E7 798 aa20.54■□□□□ 0.88
LMNA-204ENST00000368298 PVALEFA0A1B0GWK0 134 aa20.53■□□□□ 0.88
LMNA-204ENST00000368298 N4BP3O15049 544 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms