RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 PTPN13Q12923 2485 aa7.35□□□□□ -1.23
ECHDC1-202ENST00000368289 CNOT1A5YKK6 2376 aaKnown RBP7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 HECTD1Q9ULT8 2610 aa7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 CELSR3Q9NYQ7 3312 aa7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 KALRNO60229 2985 aa7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 A0A1B0GUL7 405 aa7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 CCP110O43303 1012 aa7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 UQCRFS1P1P0C7P4 283 aa7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 GBP2P32456 591 aaPredicted RBP7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 GSK3AP49840 483 aa7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 RCAN1P53805 252 aa7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 CCL23P55773 120 aa7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 IRX3P78415 501 aaPredicted RBP7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 ZXDAP98168 799 aa7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 TRDNQ13061 729 aa7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 PPP2R5BQ15173 497 aa7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 UBE3CQ15386 1083 aa7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 ZRSR1Q15695 479 aaKnown RBP7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 ALX1Q15699 326 aa7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 TTC39AQ5SRH9 613 aa7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 CCDC174Q6PII3 467 aa7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 CEP57L1Q8IYX8 460 aa7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 WASF1Q92558 559 aa7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 TMEM87BQ96K49 555 aa7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 NEUROD6Q96NK8 337 aa7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 PUS3Q9BZE2 481 aaKnown RBP7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 IGSF5Q9NSI5 407 aa7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 MORC2Q9Y6X9 1032 aaPredicted RBP7.34□□□□□ -1.23
ECHDC1-202ENST00000368289 AKAP13Q12802 2813 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 ZNF536O15090 1300 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 PTPDC1A2A3K4 754 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 SMTNL1A8MU46 457 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 BECN2A8MW95 431 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 GOLIM4O00461 696 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 ZNF213O14771 459 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 GLB1P16278 677 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 LIG1P18858 919 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 NOS3P29474 1203 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 PDIA3P30101 505 aaKnown RBP7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 CHRNA4P43681 627 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 ZNF75DP51815 510 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 BACE1P56817 501 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 FANCCQ00597 558 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 PABPC4Q13310 644 aaKnown RBP eCLIP7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 IFIT5Q13325 482 aaKnown RBP7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 KCNA10Q16322 511 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 PKN1Q16512 942 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 ANO6Q4KMQ2 910 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 CT47A1Q5JQC4 288 aaPredicted RBP7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 GORABQ5T7V8 394 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 TMCO2Q7Z6W1 182 aaPredicted RBP7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 RALYLQ86SE5 291 aaKnown RBP7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 SUGP1Q8IWZ8 645 aaKnown RBP7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 AGGF1Q8N302 714 aaeCLIP7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 TMTC2Q8N394 836 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 C12orf50Q8NA57 414 aaPredicted RBP7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 KLHDC4Q8TBB5 520 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 STK35Q8TDR2 534 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 SCLYQ96I15 445 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 CHAMP1Q96JM3 812 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 PGBD1Q96JS3 809 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 TMEM74Q96NL1 305 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 IDI2Q9BXS1 227 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 TRIM5Q9C035 493 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 MIR1-1HGQ9H1L0 117 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 CCDC86Q9H6F5 360 aaKnown RBP7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 STARD7Q9NQZ5 370 aa7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 HOOK1Q9UJC3 728 aaKnown RBP7.33□□□□□ -1.24
ECHDC1-202ENST00000368289 GRIN2DO15399 1336 aa7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 MAST3O60307 1309 aa7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 ZNF462Q96JM2 2506 aa7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 ANKRD18BA2A2Z9 1011 aa7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 ADCY6O43306 1168 aa7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 CTIFO43310 598 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 PPP6R2O75170 966 aa7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 ALX3O95076 343 aa7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 CTSBP07858 339 aa7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 ZNF865P0CJ78 1059 aaPredicted RBP7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 GNAT2P19087 354 aa7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 CMA1P23946 247 aa7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 ADORA2AP29274 412 aa7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 DLX2Q07687 328 aaPredicted RBP7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 UBE4AQ14139 1066 aa7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 PUM1Q14671 1186 aaKnown RBP eCLIP7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 PLA2G4EQ3MJ16 856 aa7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 TAF7LQ5H9L4 462 aa7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 SYNE3Q6ZMZ3 975 aa7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 Q6ZS46 218 aa7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 FERMT3Q86UX7 667 aa7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 CCAR1Q8IX12 1150 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 KIAA2013Q8IYS2 634 aa7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 ENGASEQ8NFI3 743 aa7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 TET1Q8NFU7 2136 aa7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 FBXO18Q8NFZ0 1043 aa7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 MRPS27Q92552 414 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 NKD2Q969F2 451 aaPredicted RBP7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 CCDC34Q96HJ3 373 aa7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 WDR18Q9BV38 432 aa7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 CNNM2Q9H8M5 875 aa7.32□□□□□ -1.24
ECHDC1-202ENST00000368289 RABGAP1Q9Y3P9 1069 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms