RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 ARHGAP10A1A4S6 786 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 BLVRAP53004 296 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 CDK17Q00537 523 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 CCNYL1Q8N7R7 359 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 GPT2Q8TD30 523 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 A0A0G2JND7 137 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 PGBD4Q96DM1 585 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 PTCH1Q13635 1447 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 UTYO14607 1347 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 SNX17Q15036 470 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 TNIP3Q96KP6 325 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 HEMGNQ9BXL5 484 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 ZBTB7AO95365 584 aa16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 LMNAP02545 664 aaKnown RBP16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 CDC42EP1Q00587 391 aa16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 ASAP3Q8TDY4 903 aa16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 RAPGEF5Q92565 580 aa16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 DACH2Q96NX9 599 aa16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 NARFQ9UHQ1 456 aa16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 PZPP20742 1482 aa16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 NR1D1P20393 614 aa16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 VAMP7P51809 220 aa16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 ORC2Q13416 577 aaPredicted RBP16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 KIF2CQ99661 725 aa16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 TSR3Q9UJK0 312 aaKnown RBP16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 SEC31AO94979 1220 aaKnown RBP16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 SPP2Q13103 211 aa16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 ST13P4Q8IZP2 240 aaPredicted RBP16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 KATNAL1Q9BW62 490 aa16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 MED21Q13503 144 aa16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 BFARQ9NZS9 450 aa16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 ADAMTS1Q9UHI8 967 aa16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 ABCA5Q8WWZ7 1642 aa16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 KCNA2P16389 499 aa16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 MAP4P27816 1152 aaKnown RBP16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 OCA2Q04671 838 aa16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 KRT72Q14CN4 511 aa16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 MFN1Q8IWA4 741 aa16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 TTLL11Q8NHH1 800 aa16.68■□□□□ 0.26
NUCKS1-201ENST00000367142 PRAMEF22A3QJZ6 481 aa16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 GPD1LQ8N335 351 aa16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 PITPNM3Q9BZ71 974 aa16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 ZSCAN9O15535 394 aaPredicted RBP16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 PTPN12Q05209 780 aaKnown RBP16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 PFKFB3Q16875 520 aaPredicted RBP16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 TMEM47Q9BQJ4 181 aa16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 SIK2Q9H0K1 926 aa16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 RCOR1Q9UKL0 485 aa16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 SPDYE5A6NIY4 337 aa16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 KRT31Q15323 416 aa16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 SPDYE7PQ495Y7 208 aa16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 FOPNLQ96NB1 174 aa16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 NUP85Q9BW27 656 aa16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 OSBPL3Q9H4L5 887 aa16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 PLEKHA5Q9HAU0 1116 aa16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 EML4Q9HC35 981 aaKnown RBP16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 ZNF263O14978 683 aa16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 RAP1GDS1P52306 607 aa16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 ZNF564Q8TBZ8 553 aaPredicted RBP16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 BTBD6Q96KE9 485 aa16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 PCSK1NQ9UHG2 260 aa16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 ATP7BP35670 1465 aa16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 ERBB3P21860 1342 aa16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 TAP1Q03518 808 aa16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 TRIM72Q6ZMU5 477 aa16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 OLFML3Q9NRN5 406 aa16.67■□□□□ 0.26
NUCKS1-201ENST00000367142 MROH7-TTC4A0A0A0MT08 1334 aa16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 PRKCQQ04759 706 aa16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 PTPN21Q16825 1174 aa16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 ANKRD40Q6AI12 368 aa16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 ENOSF1Q7L5Y1 443 aa16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 PPHLN1Q8NEY8 458 aaKnown RBP16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 OR6P1Q8NGX9 317 aa16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 INTS2Q9H0H0 1204 aaKnown RBP16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 DHX35Q9H5Z1 703 aaKnown RBP16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 CD209Q9NNX6 404 aa16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 RRAGDQ9NQL2 400 aaPredicted RBP16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 ZNF500O60304 480 aaPredicted RBP16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 PEX19P40855 299 aa16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 UGGT1Q9NYU2 1555 aa16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 POTEMA6NI47 508 aa16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 RPSAP08865 295 aaKnown RBP16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 KHDRBS2Q5VWX1 349 aaKnown RBP16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 SDE2Q6IQ49 451 aa16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 AIPL1Q9NZN9 384 aa16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 FRMD3A2A2Y4 597 aa16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 RASA4BC9J798 803 aa16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 RASA4O43374 803 aa16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 HSD17B4P51659 736 aa16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 BCAR1P56945 870 aa16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 COASYQ13057 564 aa16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 NUGGCQ68CJ6 796 aa16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 DDIASQ8IXT1 998 aa16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 EHD2Q9NZN4 543 aa16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 WARS2Q9UGM6 360 aaKnown RBP16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 AFF2P51816 1311 aa16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 TADA3O75528 432 aa16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 PALMO75781 387 aa16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 ARIH2O95376 493 aa16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 EFNA5P52803 228 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms