RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 PP2D1A8MPX8 630 aa12.48□□□□□ -0.41
CSNK1E-202ENST00000366216 MARCH6O60337 910 aa12.48□□□□□ -0.41
CSNK1E-202ENST00000366216 GHRP10912 638 aa12.48□□□□□ -0.41
CSNK1E-202ENST00000366216 GNAT1P11488 350 aa12.48□□□□□ -0.41
CSNK1E-202ENST00000366216 SP100P23497 879 aaPredicted RBP12.48□□□□□ -0.41
CSNK1E-202ENST00000366216 CDC25AP30304 524 aa12.48□□□□□ -0.41
CSNK1E-202ENST00000366216 GATMP50440 423 aa12.48□□□□□ -0.41
CSNK1E-202ENST00000366216 MGAT3Q09327 533 aa12.48□□□□□ -0.41
CSNK1E-202ENST00000366216 MORC3Q14149 939 aa12.48□□□□□ -0.41
CSNK1E-202ENST00000366216 LPIN1Q14693 890 aa12.48□□□□□ -0.41
CSNK1E-202ENST00000366216 DPCR1Q3MIW9 517 aa12.48□□□□□ -0.41
CSNK1E-202ENST00000366216 CT47A1Q5JQC4 288 aaPredicted RBP12.48□□□□□ -0.41
CSNK1E-202ENST00000366216 LUZP1Q86V48 1076 aa12.48□□□□□ -0.41
CSNK1E-202ENST00000366216 VSIG10LQ86VR7 867 aa12.48□□□□□ -0.41
CSNK1E-202ENST00000366216 FCHSD1Q86WN1 690 aa12.48□□□□□ -0.41
CSNK1E-202ENST00000366216 ETNPPLQ8TBG4 499 aa12.48□□□□□ -0.41
CSNK1E-202ENST00000366216 LENG9Q96B70 501 aa12.48□□□□□ -0.41
CSNK1E-202ENST00000366216 RNF25Q96BH1 459 aaPredicted RBP12.48□□□□□ -0.41
CSNK1E-202ENST00000366216 CALML4Q96GE6 196 aa12.48□□□□□ -0.41
CSNK1E-202ENST00000366216 MMTAG2Q9BU76 263 aaKnown RBP12.48□□□□□ -0.41
CSNK1E-202ENST00000366216 KBTBD4Q9NVX7 518 aa12.48□□□□□ -0.41
CSNK1E-202ENST00000366216 CDH22Q9UJ99 828 aa12.48□□□□□ -0.41
CSNK1E-202ENST00000366216 PCDHA12Q9UN75 941 aa12.48□□□□□ -0.41
CSNK1E-202ENST00000366216 MIA3Q5JRA6 1907 aa12.48□□□□□ -0.41
CSNK1E-202ENST00000366216 FRMPD4Q14CM0 1322 aa12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 FAM86B1E9PN63 330 aa12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 BIN1O00499 593 aa12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 PER2O15055 1255 aa12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 FAM86B2P0C5J1 330 aa12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 CHRM1P11229 460 aaPredicted RBP12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 MYCLP12524 364 aaPredicted RBP12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 ZNF76P36508 570 aa12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 AFMP43652 599 aa12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 DUSP6Q16828 381 aa12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 PRR16Q569H4 304 aa12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 HYIQ5T013 277 aa12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 KRT79Q5XKE5 535 aa12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 DHX40Q8IX18 779 aaKnown RBP12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 GRAMD1CQ8IYS0 662 aa12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 MLKLQ8NB16 471 aa12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 RASSF8Q8NHQ8 419 aa12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 ZBTB10Q96DT7 871 aa12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 CDCA3Q99618 268 aaPredicted RBP12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 MTRQ99707 1265 aa12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 S1PR5Q9H228 398 aa12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 SMOC2Q9H3U7 446 aa12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 AGO3Q9H9G7 860 aaKnown RBP12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 STK17AQ9UEE5 414 aa12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 DACH1Q9UI36 760 aa12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 NR2E1Q9Y466 385 aa12.47□□□□□ -0.41
CSNK1E-202ENST00000366216 CACNA1IQ9P0X4 2223 aa12.46□□□□□ -0.41
CSNK1E-202ENST00000366216 USP24Q9UPU5 2620 aa12.46□□□□□ -0.41
CSNK1E-202ENST00000366216 KDM3AQ9Y4C1 1321 aa12.46□□□□□ -0.41
CSNK1E-202ENST00000366216 IGLV3-22A0A075B6J6 115 aa12.46□□□□□ -0.41
CSNK1E-202ENST00000366216 A0A087WWV3 80 aa12.46□□□□□ -0.41
CSNK1E-202ENST00000366216 SMTNL1A8MU46 457 aa12.46□□□□□ -0.41
CSNK1E-202ENST00000366216 BECN2A8MW95 431 aa12.46□□□□□ -0.41
CSNK1E-202ENST00000366216 GOLGA6L19H0YKK7 550 aa12.46□□□□□ -0.41
CSNK1E-202ENST00000366216 IKBKBO14920 756 aa12.46□□□□□ -0.41
CSNK1E-202ENST00000366216 SRGAP2BP0DMP2 458 aa12.46□□□□□ -0.41
CSNK1E-202ENST00000366216 TGFB3P10600 412 aa12.46□□□□□ -0.41
CSNK1E-202ENST00000366216 PLCG1P19174 1290 aa12.46□□□□□ -0.41
CSNK1E-202ENST00000366216 CLCN5P51795 746 aa12.46□□□□□ -0.41
CSNK1E-202ENST00000366216 SETQ01105 290 aaPredicted RBP12.46□□□□□ -0.41
CSNK1E-202ENST00000366216 PGM5Q15124 567 aa12.46□□□□□ -0.41
CSNK1E-202ENST00000366216 TMEM119Q4V9L6 283 aa12.46□□□□□ -0.41
CSNK1E-202ENST00000366216 NIPA1Q7RTP0 329 aa12.46□□□□□ -0.41
CSNK1E-202ENST00000366216 MICAL1Q8TDZ2 1067 aa12.46□□□□□ -0.41
CSNK1E-202ENST00000366216 LMBR1Q8WVP7 490 aa12.46□□□□□ -0.41
CSNK1E-202ENST00000366216 CNTNAP3BQ96NU0 1288 aa12.46□□□□□ -0.41
CSNK1E-202ENST00000366216 CNTNAP3Q9BZ76 1288 aa12.46□□□□□ -0.41
CSNK1E-202ENST00000366216 MFSD1Q9H3U5 465 aa12.46□□□□□ -0.41
CSNK1E-202ENST00000366216 MLXIPQ9HAP2 919 aa12.46□□□□□ -0.41
CSNK1E-202ENST00000366216 RMND1Q9NWS8 449 aa12.46□□□□□ -0.41
CSNK1E-202ENST00000366216 WDR81Q562E7 1941 aa12.45□□□□□ -0.42
CSNK1E-202ENST00000366216 POTEMA6NI47 508 aa12.45□□□□□ -0.42
CSNK1E-202ENST00000366216 MEIS1O00470 390 aa12.45□□□□□ -0.42
CSNK1E-202ENST00000366216 MSH4O15457 936 aa12.45□□□□□ -0.42
CSNK1E-202ENST00000366216 BMP6P22004 513 aa12.45□□□□□ -0.42
CSNK1E-202ENST00000366216 MRPS9P82933 396 aaKnown RBP12.45□□□□□ -0.42
CSNK1E-202ENST00000366216 AMPD3Q01432 767 aa12.45□□□□□ -0.42
CSNK1E-202ENST00000366216 PUM1Q14671 1186 aaKnown RBP eCLIP12.45□□□□□ -0.42
CSNK1E-202ENST00000366216 KCNB1Q14721 858 aa12.45□□□□□ -0.42
CSNK1E-202ENST00000366216 PAN2Q504Q3 1202 aaKnown RBP12.45□□□□□ -0.42
CSNK1E-202ENST00000366216 CEP55Q53EZ4 464 aa12.45□□□□□ -0.42
CSNK1E-202ENST00000366216 ANKRD54Q6NXT1 300 aa12.45□□□□□ -0.42
CSNK1E-202ENST00000366216 SARM1Q6SZW1 724 aa12.45□□□□□ -0.42
CSNK1E-202ENST00000366216 TMEM184AQ6ZMB5 413 aa12.45□□□□□ -0.42
CSNK1E-202ENST00000366216 KCTD17Q8N5Z5 321 aa12.45□□□□□ -0.42
CSNK1E-202ENST00000366216 SNX29Q8TEQ0 813 aa12.45□□□□□ -0.42
CSNK1E-202ENST00000366216 CDK5RAP3Q96JB5 506 aa12.45□□□□□ -0.42
CSNK1E-202ENST00000366216 PNMA5Q96PV4 448 aa12.45□□□□□ -0.42
CSNK1E-202ENST00000366216 GPR20Q99678 358 aa12.45□□□□□ -0.42
CSNK1E-202ENST00000366216 NT5C3AQ9H0P0 336 aa12.45□□□□□ -0.42
CSNK1E-202ENST00000366216 HCSTQ9UBK5 93 aa12.45□□□□□ -0.42
CSNK1E-202ENST00000366216 MYH9P35579 1960 aaKnown RBP12.45□□□□□ -0.42
CSNK1E-202ENST00000366216 NOP56O00567 594 aaKnown RBP12.44□□□□□ -0.42
CSNK1E-202ENST00000366216 TPM4P67936 248 aa12.44□□□□□ -0.42
CSNK1E-202ENST00000366216 UBE3AQ05086 875 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms