RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 EIF2AQ9BY44 585 aaKnown RBP18.69■□□□□ 0.58
CKLF-204ENST00000362093 CCDC113Q9H0I3 377 aa18.69■□□□□ 0.58
CKLF-204ENST00000362093 C17orf75Q9HAS0 396 aa18.69■□□□□ 0.58
CKLF-204ENST00000362093 PRMT7Q9NVM4 692 aaPredicted RBP18.69■□□□□ 0.58
CKLF-204ENST00000362093 KCND2Q9NZV8 630 aa18.69■□□□□ 0.58
CKLF-204ENST00000362093 HCSTQ9UBK5 93 aa18.69■□□□□ 0.58
CKLF-204ENST00000362093 PLAGL2Q9UPG8 496 aa18.69■□□□□ 0.58
CKLF-204ENST00000362093 CUL9Q8IWT3 2517 aa18.68■□□□□ 0.58
CKLF-204ENST00000362093 SFI1A8K8P3 1242 aa18.68■□□□□ 0.58
CKLF-204ENST00000362093 PPP6R2O75170 966 aa18.68■□□□□ 0.58
CKLF-204ENST00000362093 OFD1O75665 1012 aa18.68■□□□□ 0.58
CKLF-204ENST00000362093 SSBP05455 408 aaKnown RBP eCLIP18.68■□□□□ 0.58
CKLF-204ENST00000362093 PLCG1P19174 1290 aa18.68■□□□□ 0.58
CKLF-204ENST00000362093 PEX3P56589 373 aa18.68■□□□□ 0.58
CKLF-204ENST00000362093 MAPK6Q16659 721 aa18.68■□□□□ 0.58
CKLF-204ENST00000362093 KLHL23Q8NBE8 558 aa18.68■□□□□ 0.58
CKLF-204ENST00000362093 SMG8Q8ND04 991 aaKnown RBP18.68■□□□□ 0.58
CKLF-204ENST00000362093 CNNM3Q8NE01 707 aa18.68■□□□□ 0.58
CKLF-204ENST00000362093 HELQQ8TDG4 1101 aa18.68■□□□□ 0.58
CKLF-204ENST00000362093 RSPH1Q8WYR4 309 aa18.68■□□□□ 0.58
CKLF-204ENST00000362093 RAD54LQ92698 747 aa18.68■□□□□ 0.58
CKLF-204ENST00000362093 SYMPKQ92797 1274 aaKnown RBP18.68■□□□□ 0.58
CKLF-204ENST00000362093 MRPL38Q96DV4 380 aaKnown RBP18.68■□□□□ 0.58
CKLF-204ENST00000362093 DRC1Q96MC2 740 aa18.68■□□□□ 0.58
CKLF-204ENST00000362093 NTPCRQ9BSD7 190 aaKnown RBP18.68■□□□□ 0.58
CKLF-204ENST00000362093 RALGAPA2Q2PPJ7 1873 aa18.68■□□□□ 0.58
CKLF-204ENST00000362093 NLRC5Q86WI3 1866 aa18.67■□□□□ 0.58
CKLF-204ENST00000362093 TTLL13PA6NNM8 815 aa18.67■□□□□ 0.58
CKLF-204ENST00000362093 ACKR2O00590 384 aa18.67■□□□□ 0.58
CKLF-204ENST00000362093 SPTLC2O15270 562 aa18.67■□□□□ 0.58
CKLF-204ENST00000362093 GRM6O15303 877 aa18.67■□□□□ 0.58
CKLF-204ENST00000362093 YEATS4O95619 227 aa18.67■□□□□ 0.58
CKLF-204ENST00000362093 ITGB1P05556 798 aa18.67■□□□□ 0.58
CKLF-204ENST00000362093 DDIT3P35638 169 aa18.67■□□□□ 0.58
CKLF-204ENST00000362093 NPTX2P47972 431 aa18.67■□□□□ 0.58
CKLF-204ENST00000362093 EFNA5P52803 228 aa18.67■□□□□ 0.58
CKLF-204ENST00000362093 MCM6Q14566 821 aa18.67■□□□□ 0.58
CKLF-204ENST00000362093 STK38Q15208 465 aa18.67■□□□□ 0.58
CKLF-204ENST00000362093 PTPROQ16827 1216 aa18.67■□□□□ 0.58
CKLF-204ENST00000362093 LONRF3Q496Y0 759 aa18.67■□□□□ 0.58
CKLF-204ENST00000362093 MICALL1Q8N3F8 863 aa18.67■□□□□ 0.58
CKLF-204ENST00000362093 SPPL3Q8TCT6 385 aa18.67■□□□□ 0.58
CKLF-204ENST00000362093 KIFC3Q9BVG8 833 aa18.67■□□□□ 0.58
CKLF-204ENST00000362093 LMAN2LQ9H0V9 348 aa18.67■□□□□ 0.58
CKLF-204ENST00000362093 AAASQ9NRG9 546 aa18.67■□□□□ 0.58
CKLF-204ENST00000362093 ZDHHC9Q9Y397 364 aa18.67■□□□□ 0.58
CKLF-204ENST00000362093 IPPQ9Y573 584 aa18.67■□□□□ 0.58
CKLF-204ENST00000362093 PCDHB12Q9Y5F1 795 aa18.67■□□□□ 0.58
CKLF-204ENST00000362093 EYSQ5T1H1 3165 aa18.67■□□□□ 0.58
CKLF-204ENST00000362093 PRKCBP05771 671 aa18.66■□□□□ 0.58
CKLF-204ENST00000362093 LAG3P18627 525 aa18.66■□□□□ 0.58
CKLF-204ENST00000362093 SPOUT1Q5T280 376 aaKnown RBP18.66■□□□□ 0.58
CKLF-204ENST00000362093 ATL3Q6DD88 541 aa18.66■□□□□ 0.58
CKLF-204ENST00000362093 CDR2LQ86X02 465 aaPredicted RBP18.66■□□□□ 0.58
CKLF-204ENST00000362093 LRRC43Q8N309 656 aa18.66■□□□□ 0.58
CKLF-204ENST00000362093 COLGALT1Q8NBJ5 622 aa18.66■□□□□ 0.58
CKLF-204ENST00000362093 RNF39Q9H2S5 420 aa18.66■□□□□ 0.58
CKLF-204ENST00000362093 TMEM134Q9H6X4 195 aa18.66■□□□□ 0.58
CKLF-204ENST00000362093 ALG13Q9NP73 1137 aaKnown RBP18.66■□□□□ 0.58
CKLF-204ENST00000362093 ARHGAP28Q9P2N2 729 aa18.66■□□□□ 0.58
CKLF-204ENST00000362093 KCNG1Q9UIX4 513 aa18.66■□□□□ 0.58
CKLF-204ENST00000362093 COL4A4P53420 1690 aaPredicted RBP18.66■□□□□ 0.58
CKLF-204ENST00000362093 PRRC2BQ5JSZ5 2229 aaKnown RBP18.65■□□□□ 0.58
CKLF-204ENST00000362093 NPHP3-ACAD11A0A0J9YXS1 232 aa18.65■□□□□ 0.58
CKLF-204ENST00000362093 CCDC169A6NNP5 214 aa18.65■□□□□ 0.58
CKLF-204ENST00000362093 K7ERI5 159 aa18.65■□□□□ 0.58
CKLF-204ENST00000362093 BRD1O95696 1058 aa18.65■□□□□ 0.58
CKLF-204ENST00000362093 EDN1P05305 212 aa18.65■□□□□ 0.58
CKLF-204ENST00000362093 PLS3P13797 630 aa18.65■□□□□ 0.58
CKLF-204ENST00000362093 RAD51AP2Q09MP3 1159 aa18.65■□□□□ 0.58
CKLF-204ENST00000362093 DMP1Q13316 513 aaPredicted RBP18.65■□□□□ 0.58
CKLF-204ENST00000362093 PRPF4BQ13523 1007 aaKnown RBP18.65■□□□□ 0.58
CKLF-204ENST00000362093 CAMK1Q14012 370 aa18.65■□□□□ 0.58
CKLF-204ENST00000362093 FOXD4L6Q3SYB3 417 aaPredicted RBP18.65■□□□□ 0.58
CKLF-204ENST00000362093 NOMO2Q5JPE7 1267 aa18.65■□□□□ 0.58
CKLF-204ENST00000362093 SLC27A1Q6PCB7 646 aa18.65■□□□□ 0.58
CKLF-204ENST00000362093 GLB1LQ6UWU2 654 aa18.65■□□□□ 0.58
CKLF-204ENST00000362093 FOXD4L3Q6VB84 417 aaPredicted RBP18.65■□□□□ 0.58
CKLF-204ENST00000362093 GPBP1Q86WP2 473 aa18.65■□□□□ 0.58
CKLF-204ENST00000362093 RASSF8Q8NHQ8 419 aa18.65■□□□□ 0.58
CKLF-204ENST00000362093 SPIRE2Q8WWL2 714 aa18.65■□□□□ 0.58
CKLF-204ENST00000362093 MRPL9Q9BYD2 267 aaKnown RBP18.65■□□□□ 0.58
CKLF-204ENST00000362093 KMT5AQ9NQR1 393 aa18.65■□□□□ 0.58
CKLF-204ENST00000362093 PRDM6Q9NQX0 595 aa18.65■□□□□ 0.58
CKLF-204ENST00000362093 CCDC39Q9UFE4 941 aa18.65■□□□□ 0.58
CKLF-204ENST00000362093 USP20Q9Y2K6 914 aa18.65■□□□□ 0.58
CKLF-204ENST00000362093 RBM19Q9Y4C8 960 aaKnown RBP18.65■□□□□ 0.58
CKLF-204ENST00000362093 HES2Q9Y543 173 aa18.65■□□□□ 0.58
CKLF-204ENST00000362093 CNTNAP2Q9UHC6 1331 aa18.65■□□□□ 0.58
CKLF-204ENST00000362093 ITGA4P13612 1032 aa18.64■□□□□ 0.57
CKLF-204ENST00000362093 DNAJB1P25685 340 aa18.64■□□□□ 0.57
CKLF-204ENST00000362093 AFF1P51825 1210 aaKnown RBP18.64■□□□□ 0.57
CKLF-204ENST00000362093 BECN1Q14457 450 aa18.64■□□□□ 0.57
CKLF-204ENST00000362093 DHX8Q14562 1220 aaKnown RBP18.64■□□□□ 0.57
CKLF-204ENST00000362093 CSPP1Q1MSJ5 1256 aa18.64■□□□□ 0.57
CKLF-204ENST00000362093 NT5DC1Q5TFE4 455 aa18.64■□□□□ 0.57
CKLF-204ENST00000362093 KCNT2Q6UVM3 1135 aa18.64■□□□□ 0.57
CKLF-204ENST00000362093 TAS1R3Q7RTX0 852 aa18.64■□□□□ 0.57
CKLF-204ENST00000362093 LARP4BQ92615 738 aaKnown RBP18.64■□□□□ 0.57
CKLF-204ENST00000362093 PDZD7Q9H5P4 517 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms