RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 STX18Q9P2W9 335 aaKnown RBP11.65□□□□□ -0.54
CLIP1-203ENST00000361654 AGO2Q9UKV8 859 aaKnown RBP11.65□□□□□ -0.54
CLIP1-203ENST00000361654 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.65□□□□□ -0.54
CLIP1-203ENST00000361654 TNS3Q68CZ2 1445 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 RRN3P2A6NIE6 340 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 HOXA2O43364 376 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 HIST1H2AGP0C0S8 130 aaPredicted RBP11.65□□□□□ -0.54
CLIP1-203ENST00000361654 CYP2D6P10635 497 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 HIST1H2ADP20671 130 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 EIF4A3P38919 411 aaKnown RBP11.65□□□□□ -0.54
CLIP1-203ENST00000361654 AMPD2Q01433 879 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 GRM4Q14833 912 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 PATL1Q86TB9 770 aaKnown RBP11.65□□□□□ -0.54
CLIP1-203ENST00000361654 TMEM169Q96HH4 297 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 HIST1H2AHQ96KK5 128 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 HIST1H2AJQ99878 128 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 H2AFJQ9BTM1 129 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 EIF2AQ9BY44 585 aaKnown RBP11.65□□□□□ -0.54
CLIP1-203ENST00000361654 ASPSCR1Q9BZE9 553 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 OSBPL3Q9H4L5 887 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 DCP1AQ9NPI6 582 aaPredicted RBP11.65□□□□□ -0.54
CLIP1-203ENST00000361654 MED4Q9NPJ6 270 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 CHCHD3Q9NX63 227 aaKnown RBP11.65□□□□□ -0.54
CLIP1-203ENST00000361654 AFF4Q9UHB7 1163 aaKnown RBP11.65□□□□□ -0.54
CLIP1-203ENST00000361654 RALBP11234 206 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 CDC25AP30304 524 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 RBP5P82980 135 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 TAP1Q03518 808 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 MFN1Q8IWA4 741 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 OR6P1Q8NGX9 317 aa11.65□□□□□ -0.54
CLIP1-203ENST00000361654 ABCA5Q8WWZ7 1642 aa11.65□□□□□ -0.55
CLIP1-203ENST00000361654 PVALEFA0A1B0GWK0 134 aa11.65□□□□□ -0.55
CLIP1-203ENST00000361654 MYBL1P10243 752 aa11.65□□□□□ -0.55
CLIP1-203ENST00000361654 NCF2P19878 526 aaPredicted RBP11.65□□□□□ -0.55
CLIP1-203ENST00000361654 GCLMP48507 274 aa11.65□□□□□ -0.55
CLIP1-203ENST00000361654 EPHB4P54760 987 aa11.65□□□□□ -0.55
CLIP1-203ENST00000361654 SCYL3Q8IZE3 742 aa11.65□□□□□ -0.55
CLIP1-203ENST00000361654 HINFPQ9BQA5 517 aa11.65□□□□□ -0.55
CLIP1-203ENST00000361654 LXNQ9BS40 222 aa11.65□□□□□ -0.55
CLIP1-203ENST00000361654 CAPS2Q9BXY5 557 aa11.65□□□□□ -0.55
CLIP1-203ENST00000361654 CASS4Q9NQ75 786 aa11.65□□□□□ -0.55
CLIP1-203ENST00000361654 PPP1R9AQ9ULJ8 1098 aa11.65□□□□□ -0.55
CLIP1-203ENST00000361654 CRB1P82279 1406 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 PLEKHA8P1O95397 391 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 RPLP2P05387 115 aaKnown RBP11.64□□□□□ -0.55
CLIP1-203ENST00000361654 CNPY4Q8N129 248 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 IP6K2Q9UHH9 426 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 MAN1B1Q9UKM7 699 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 ATP8A1Q9Y2Q0 1164 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 L3MBTL1Q9Y468 752 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 ARHGAP10A1A4S6 786 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 PPP1R12AO14974 1030 aaPredicted RBP11.64□□□□□ -0.55
CLIP1-203ENST00000361654 PCSK1P29120 753 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 VAMP7P51809 220 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 SCFD2Q8WU76 684 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 COLEC11Q9BWP8 271 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 PLEKHA5Q9HAU0 1116 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 CPSF2Q9P2I0 782 aaKnown RBP11.64□□□□□ -0.55
CLIP1-203ENST00000361654 CDC23Q9UJX2 597 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 CDV3Q9UKY7 258 aaKnown RBP11.64□□□□□ -0.55
CLIP1-203ENST00000361654 IPPQ9Y573 584 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 UBA6A0AVT1 1052 aaPredicted RBP11.64□□□□□ -0.55
CLIP1-203ENST00000361654 CFAP99D6REC4 459 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 GNA15P30679 374 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 ALDH7A1P49419 539 aaKnown RBP11.64□□□□□ -0.55
CLIP1-203ENST00000361654 ATP1A2P50993 1020 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 BCAR1P56945 870 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 DR1Q01658 176 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 BFSP2Q13515 415 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 STYK1Q6J9G0 422 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 SMYD4Q8IYR2 804 aaPredicted RBP11.64□□□□□ -0.55
CLIP1-203ENST00000361654 PAGE5Q96GU1 130 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 DDX56Q9NY93 547 aaKnown RBP11.64□□□□□ -0.55
CLIP1-203ENST00000361654 SYNGAP1Q96PV0 1343 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 PODXLO00592 558 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 PLS3P13797 630 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 GPC5P78333 572 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 HABP4Q5JVS0 413 aaKnown RBP11.64□□□□□ -0.55
CLIP1-203ENST00000361654 LINC00301Q8NCQ3 95 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 CHST13Q8NET6 341 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 NEDD1Q8NHV4 660 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 RAD54LQ92698 747 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 DISP1Q96F81 1524 aa11.64□□□□□ -0.55
CLIP1-203ENST00000361654 POTEB3A0JP26 581 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 KCNA1Q09470 495 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 TRIP13Q15645 432 aaPredicted RBP11.63□□□□□ -0.55
CLIP1-203ENST00000361654 DGKDQ16760 1214 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 POTEBQ6S5H4 581 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 ACAD11Q709F0 780 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 WDR75Q8IWA0 830 aaKnown RBP11.63□□□□□ -0.55
CLIP1-203ENST00000361654 CCDC197Q8NCU1 140 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 CFAP69A5D8W1 941 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 DGAT1O75907 488 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 GMPSP49915 693 aaPredicted RBP11.63□□□□□ -0.55
CLIP1-203ENST00000361654 ANO4Q32M45 955 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 CRLF3Q8IUI8 442 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 KSR1Q8IVT5 923 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 NRBF2Q96F24 287 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 SPATA16Q9BXB7 569 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 FAM129AQ9BZQ8 928 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms