RNA–Protein interactions for RNA: ENST00000361530.10

CNKSR1-201, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-201ENST00000361530 ZBTB21Q9ULJ3 1066 aa16.8■□□□□ 0.28
CNKSR1-201ENST00000361530 SYNPO2Q9UMS6 1093 aa16.8■□□□□ 0.28
CNKSR1-201ENST00000361530 MYH11P35749 1972 aa16.79■□□□□ 0.28
CNKSR1-201ENST00000361530 BACH1O14867 736 aa16.79■□□□□ 0.28
CNKSR1-201ENST00000361530 PPFIA2O75334 1257 aa16.79■□□□□ 0.28
CNKSR1-201ENST00000361530 MAGOHP61326 146 aaKnown RBP16.79■□□□□ 0.28
CNKSR1-201ENST00000361530 TRAF1Q13077 416 aa16.79■□□□□ 0.28
CNKSR1-201ENST00000361530 ZDHHC14Q8IZN3 488 aa16.79■□□□□ 0.28
CNKSR1-201ENST00000361530 CHURC1Q8WUH1 139 aa16.79■□□□□ 0.28
CNKSR1-201ENST00000361530 MAGOHBQ96A72 148 aaKnown RBP16.79■□□□□ 0.28
CNKSR1-201ENST00000361530 FMO2Q99518 471 aa16.79■□□□□ 0.28
CNKSR1-201ENST00000361530 ACP6Q9NPH0 428 aa16.79■□□□□ 0.28
CNKSR1-201ENST00000361530 DIS3Q9Y2L1 958 aaKnown RBP16.79■□□□□ 0.28
CNKSR1-201ENST00000361530 PPP2R2AP63151 447 aa16.79■□□□□ 0.28
CNKSR1-201ENST00000361530 KRT71Q3SY84 523 aa16.79■□□□□ 0.28
CNKSR1-201ENST00000361530 AGBL2Q5U5Z8 902 aa16.79■□□□□ 0.28
CNKSR1-201ENST00000361530 IL31RAQ8NI17 732 aa16.79■□□□□ 0.28
CNKSR1-201ENST00000361530 MXRA8Q9BRK3 442 aa16.79■□□□□ 0.28
CNKSR1-201ENST00000361530 EPB41L4BQ9H329 900 aa16.79■□□□□ 0.28
CNKSR1-201ENST00000361530 CTTNBP2NLQ9P2B4 639 aa16.79■□□□□ 0.28
CNKSR1-201ENST00000361530 SNX24Q9Y343 169 aa16.79■□□□□ 0.28
CNKSR1-201ENST00000361530 DAAM1Q9Y4D1 1078 aa16.79■□□□□ 0.28
CNKSR1-201ENST00000361530 TMEM110-MUSTN1A8MSY1 372 aa16.78■□□□□ 0.28
CNKSR1-201ENST00000361530 H0YIN7 160 aa16.78■□□□□ 0.28
CNKSR1-201ENST00000361530 KRT13P13646 458 aa16.78■□□□□ 0.28
CNKSR1-201ENST00000361530 FNTAP49354 379 aa16.78■□□□□ 0.28
CNKSR1-201ENST00000361530 VAMP7P51809 220 aa16.78■□□□□ 0.28
CNKSR1-201ENST00000361530 SWT1Q5T5J6 900 aaKnown RBP16.78■□□□□ 0.28
CNKSR1-201ENST00000361530 RPUSD2Q8IZ73 545 aaKnown RBP16.78■□□□□ 0.28
CNKSR1-201ENST00000361530 AGBL1Q96MI9 1066 aa16.78■□□□□ 0.28
CNKSR1-201ENST00000361530 PCDHB18PQ96TA0 734 aa16.78■□□□□ 0.28
CNKSR1-201ENST00000361530 RAB17Q9H0T7 212 aa16.78■□□□□ 0.28
CNKSR1-201ENST00000361530 COL20A1Q9P218 1284 aa16.78■□□□□ 0.28
CNKSR1-201ENST00000361530 TMEM150BA6NC51 233 aa16.78■□□□□ 0.28
CNKSR1-201ENST00000361530 GMNCA6NCL1 334 aa16.78■□□□□ 0.28
CNKSR1-201ENST00000361530 SHBGP04278 402 aa16.78■□□□□ 0.28
CNKSR1-201ENST00000361530 BCRP11274 1271 aa16.78■□□□□ 0.28
CNKSR1-201ENST00000361530 SETQ01105 290 aaPredicted RBP16.78■□□□□ 0.28
CNKSR1-201ENST00000361530 QPCTQ16769 361 aa16.78■□□□□ 0.28
CNKSR1-201ENST00000361530 TBC1D10BQ4KMP7 808 aaPredicted RBP16.78■□□□□ 0.28
CNKSR1-201ENST00000361530 CPNE8Q86YQ8 564 aa16.78■□□□□ 0.28
CNKSR1-201ENST00000361530 JAMLQ86YT9 394 aa16.78■□□□□ 0.28
CNKSR1-201ENST00000361530 C18orf8Q96DM3 657 aa16.78■□□□□ 0.28
CNKSR1-201ENST00000361530 CYFIP2Q96F07 1278 aa16.78■□□□□ 0.28
CNKSR1-201ENST00000361530 KCNH7Q9NS40 1196 aa16.78■□□□□ 0.28
CNKSR1-201ENST00000361530 ATXN2Q99700 1313 aaKnown RBP16.77■□□□□ 0.28
CNKSR1-201ENST00000361530 TRAPPC3O43617 180 aa16.77■□□□□ 0.28
CNKSR1-201ENST00000361530 SGPL1O95470 568 aa16.77■□□□□ 0.28
CNKSR1-201ENST00000361530 PLTPP55058 493 aa16.77■□□□□ 0.28
CNKSR1-201ENST00000361530 IFT88Q13099 833 aa16.77■□□□□ 0.28
CNKSR1-201ENST00000361530 EPC2Q52LR7 807 aa16.77■□□□□ 0.28
CNKSR1-201ENST00000361530 ZDHHC24Q6UX98 284 aa16.77■□□□□ 0.28
CNKSR1-201ENST00000361530 INTS8Q75QN2 995 aaKnown RBP16.77■□□□□ 0.28
CNKSR1-201ENST00000361530 MIGA2Q7L4E1 593 aa16.77■□□□□ 0.28
CNKSR1-201ENST00000361530 TRMT1LQ7Z2T5 733 aaKnown RBP16.77■□□□□ 0.28
CNKSR1-201ENST00000361530 MIER3Q7Z3K6 550 aa16.77■□□□□ 0.28
CNKSR1-201ENST00000361530 SPATS2Q86XZ4 545 aaKnown RBP16.77■□□□□ 0.28
CNKSR1-201ENST00000361530 RHOT2Q8IXI1 618 aa16.77■□□□□ 0.28
CNKSR1-201ENST00000361530 RIT2Q99578 217 aa16.77■□□□□ 0.28
CNKSR1-201ENST00000361530 VCPKMTQ9H867 229 aa16.77■□□□□ 0.28
CNKSR1-201ENST00000361530 EHMT1Q9H9B1 1298 aa16.77■□□□□ 0.28
CNKSR1-201ENST00000361530 ZHX2Q9Y6X8 837 aa16.77■□□□□ 0.28
CNKSR1-201ENST00000361530 SRRM3A6NNA2 597 aaPredicted RBP16.77■□□□□ 0.27
CNKSR1-201ENST00000361530 KIAA0391O15091 583 aaKnown RBP16.77■□□□□ 0.27
CNKSR1-201ENST00000361530 DHX15O43143 795 aaKnown RBP16.77■□□□□ 0.27
CNKSR1-201ENST00000361530 ATMINO43313 823 aaPredicted RBP16.77■□□□□ 0.27
CNKSR1-201ENST00000361530 MYBPC2Q14324 1141 aa16.77■□□□□ 0.27
CNKSR1-201ENST00000361530 UBAP2Q5T6F2 1119 aaKnown RBP16.77■□□□□ 0.27
CNKSR1-201ENST00000361530 C6orf89Q6UWU4 347 aa16.77■□□□□ 0.27
CNKSR1-201ENST00000361530 PRELID2Q8N945 189 aa16.77■□□□□ 0.27
CNKSR1-201ENST00000361530 FBXO25Q8TCJ0 367 aa16.77■□□□□ 0.27
CNKSR1-201ENST00000361530 C7orf43Q8WVR3 580 aa16.77■□□□□ 0.27
CNKSR1-201ENST00000361530 RAPGEF5Q92565 580 aa16.77■□□□□ 0.27
CNKSR1-201ENST00000361530 NAP1L3Q99457 506 aaPredicted RBP16.77■□□□□ 0.27
CNKSR1-201ENST00000361530 GOLGA6L10A0A0M3HER8 536 aa16.76■□□□□ 0.27
CNKSR1-201ENST00000361530 SPDYE2BA6NHP3 402 aa16.76■□□□□ 0.27
CNKSR1-201ENST00000361530 CAND2O75155 1236 aa16.76■□□□□ 0.27
CNKSR1-201ENST00000361530 SPDYE6P0CI01 402 aa16.76■□□□□ 0.27
CNKSR1-201ENST00000361530 CHRNB2P17787 502 aa16.76■□□□□ 0.27
CNKSR1-201ENST00000361530 PTGIRP43119 386 aa16.76■□□□□ 0.27
CNKSR1-201ENST00000361530 HADHBP55084 474 aaKnown RBP16.76■□□□□ 0.27
CNKSR1-201ENST00000361530 CHADLQ6NUI6 762 aa16.76■□□□□ 0.27
CNKSR1-201ENST00000361530 FAM43BQ6ZT52 329 aaPredicted RBP16.76■□□□□ 0.27
CNKSR1-201ENST00000361530 FMNL3Q8IVF7 1028 aa16.76■□□□□ 0.27
CNKSR1-201ENST00000361530 MDM1Q8TC05 714 aa16.76■□□□□ 0.27
CNKSR1-201ENST00000361530 LARSQ9P2J5 1176 aaKnown RBP16.76■□□□□ 0.27
CNKSR1-201ENST00000361530 RFX1P22670 979 aa16.76■□□□□ 0.27
CNKSR1-201ENST00000361530 GPC5P78333 572 aa16.76■□□□□ 0.27
CNKSR1-201ENST00000361530 IFFO1Q0D2I5 559 aa16.76■□□□□ 0.27
CNKSR1-201ENST00000361530 SPP2Q13103 211 aa16.76■□□□□ 0.27
CNKSR1-201ENST00000361530 MESDQ14696 234 aa16.76■□□□□ 0.27
CNKSR1-201ENST00000361530 STYK1Q6J9G0 422 aa16.76■□□□□ 0.27
CNKSR1-201ENST00000361530 TTC27Q6P3X3 843 aa16.76■□□□□ 0.27
CNKSR1-201ENST00000361530 NOP9Q86U38 636 aaKnown RBP16.76■□□□□ 0.27
CNKSR1-201ENST00000361530 HSPBP1Q9NZL4 362 aa16.76■□□□□ 0.27
CNKSR1-201ENST00000361530 DDX20Q9UHI6 824 aaKnown RBP16.76■□□□□ 0.27
CNKSR1-201ENST00000361530 TCRBV7S2A1N4TA0A589 114 aa16.75■□□□□ 0.27
CNKSR1-201ENST00000361530 GOLGA8IPA6NC78 632 aa16.75■□□□□ 0.27
CNKSR1-201ENST00000361530 GOLGA8JA6NMD2 632 aa16.75■□□□□ 0.27
CNKSR1-201ENST00000361530 NFIBO00712 420 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms