RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 SMTNP53814 917 aa24.51■■□□□ 1.51
LDB1-201ENST00000361198 DMP1Q13316 513 aaPredicted RBP24.51■■□□□ 1.51
LDB1-201ENST00000361198 ARHGAP44Q17R89 818 aa24.51■■□□□ 1.51
LDB1-201ENST00000361198 SLC17A8Q8NDX2 589 aa24.51■■□□□ 1.51
LDB1-201ENST00000361198 SLC30A5Q8TAD4 765 aa24.51■■□□□ 1.51
LDB1-201ENST00000361198 U2AF1L4Q8WU68 220 aaKnown RBP24.51■■□□□ 1.51
LDB1-201ENST00000361198 HINFPQ9BQA5 517 aa24.51■■□□□ 1.51
LDB1-201ENST00000361198 NFASCO94856 1347 aa24.51■■□□□ 1.51
LDB1-201ENST00000361198 MYPNQ86TC9 1320 aa24.51■■□□□ 1.51
LDB1-201ENST00000361198 WDR90Q96KV7 1748 aa24.51■■□□□ 1.51
LDB1-201ENST00000361198 GOLGA8IPA6NC78 632 aa24.51■■□□□ 1.51
LDB1-201ENST00000361198 GOLGA8JA6NMD2 632 aa24.51■■□□□ 1.51
LDB1-201ENST00000361198 ANKRD63C9JTQ0 380 aa24.51■■□□□ 1.51
LDB1-201ENST00000361198 PSAPP07602 524 aa24.51■■□□□ 1.51
LDB1-201ENST00000361198 SNRPFP62306 86 aaKnown RBP24.51■■□□□ 1.51
LDB1-201ENST00000361198 CDHR1Q96JP9 859 aa24.51■■□□□ 1.51
LDB1-201ENST00000361198 SPATA31C2B4DYI2 1134 aa24.5■■□□□ 1.51
LDB1-201ENST00000361198 NOP2P46087 812 aaKnown RBP24.5■■□□□ 1.51
LDB1-201ENST00000361198 ACTR2P61160 394 aa24.5■■□□□ 1.51
LDB1-201ENST00000361198 TREML2Q5T2D2 321 aa24.5■■□□□ 1.51
LDB1-201ENST00000361198 C8orf74Q6P047 294 aa24.5■■□□□ 1.51
LDB1-201ENST00000361198 GLYCTKQ8IVS8 523 aa24.5■■□□□ 1.51
LDB1-201ENST00000361198 CNKSR2Q8WXI2 1034 aa24.5■■□□□ 1.51
LDB1-201ENST00000361198 GOLPH3Q9H4A6 298 aa24.5■■□□□ 1.51
LDB1-201ENST00000361198 PFASO15067 1338 aa24.5■■□□□ 1.51
LDB1-201ENST00000361198 DENND3A2RUS2 1198 aa24.5■■□□□ 1.51
LDB1-201ENST00000361198 ADRB2P07550 413 aa24.5■■□□□ 1.51
LDB1-201ENST00000361198 H2AFZP0C0S5 128 aa24.5■■□□□ 1.51
LDB1-201ENST00000361198 GNPTABQ3T906 1256 aa24.5■■□□□ 1.51
LDB1-201ENST00000361198 H2AFVQ71UI9 128 aa24.5■■□□□ 1.51
LDB1-201ENST00000361198 MAP4K3Q8IVH8 894 aa24.5■■□□□ 1.51
LDB1-201ENST00000361198 SYT11Q9BT88 431 aa24.5■■□□□ 1.51
LDB1-201ENST00000361198 KMT5AQ9NQR1 393 aa24.5■■□□□ 1.51
LDB1-201ENST00000361198 FEZ2Q9UHY8 353 aaPredicted RBP24.5■■□□□ 1.51
LDB1-201ENST00000361198 LCMT1Q9UIC8 334 aa24.5■■□□□ 1.51
LDB1-201ENST00000361198 SRCAPQ6ZRS2 3230 aa24.49■■□□□ 1.51
LDB1-201ENST00000361198 MYO1CO00159 1063 aa24.49■■□□□ 1.51
LDB1-201ENST00000361198 MAPK13O15264 365 aa24.49■■□□□ 1.51
LDB1-201ENST00000361198 STAM2O75886 525 aa24.49■■□□□ 1.51
LDB1-201ENST00000361198 DDNO94850 711 aaPredicted RBP24.49■■□□□ 1.51
LDB1-201ENST00000361198 CNGA1P29973 690 aa24.49■■□□□ 1.51
LDB1-201ENST00000361198 SP2Q02086 613 aa24.49■■□□□ 1.51
LDB1-201ENST00000361198 NNTQ13423 1086 aa24.49■■□□□ 1.51
LDB1-201ENST00000361198 FOXR1Q6PIV2 292 aa24.49■■□□□ 1.51
LDB1-201ENST00000361198 ABHD15Q6UXT9 468 aa24.49■■□□□ 1.51
LDB1-201ENST00000361198 FAM76AQ8TAV0 307 aa24.49■■□□□ 1.51
LDB1-201ENST00000361198 KIFAP3Q92845 792 aa24.49■■□□□ 1.51
LDB1-201ENST00000361198 NTPCRQ9BSD7 190 aaKnown RBP24.49■■□□□ 1.51
LDB1-201ENST00000361198 EXOC7Q9UPT5 735 aa24.49■■□□□ 1.51
LDB1-201ENST00000361198 ARID2Q68CP9 1835 aa24.49■■□□□ 1.51
LDB1-201ENST00000361198 GOLGA6CA6NDK9 693 aa24.49■■□□□ 1.51
LDB1-201ENST00000361198 FOXN3O00409 490 aaPredicted RBP24.49■■□□□ 1.51
LDB1-201ENST00000361198 GOLGA6DP0CG33 693 aa24.49■■□□□ 1.51
LDB1-201ENST00000361198 CNTN2Q02246 1040 aa24.49■■□□□ 1.51
LDB1-201ENST00000361198 SLC20A2Q08357 652 aa24.49■■□□□ 1.51
LDB1-201ENST00000361198 FSTL1Q12841 308 aa24.49■■□□□ 1.51
LDB1-201ENST00000361198 EPC2Q52LR7 807 aa24.49■■□□□ 1.51
LDB1-201ENST00000361198 ALS2CLQ60I27 953 aa24.49■■□□□ 1.51
LDB1-201ENST00000361198 CBWD2Q8IUF1 395 aa24.49■■□□□ 1.51
LDB1-201ENST00000361198 GOLGA6AQ9NYA3 693 aa24.49■■□□□ 1.51
LDB1-201ENST00000361198 RRP15Q9Y3B9 282 aaKnown RBP24.49■■□□□ 1.51
LDB1-201ENST00000361198 PTPRFP10586 1907 aa24.48■■□□□ 1.51
LDB1-201ENST00000361198 ATP8B3O60423 1300 aa24.48■■□□□ 1.51
LDB1-201ENST00000361198 P4HA2O15460 535 aa24.48■■□□□ 1.51
LDB1-201ENST00000361198 DKC1O60832 514 aaKnown RBP eCLIP24.48■■□□□ 1.511e-9■□□□□ 8.9
LDB1-201ENST00000361198 MRPS25P82663 173 aaKnown RBP24.48■■□□□ 1.51
LDB1-201ENST00000361198 PRKCEQ02156 737 aa24.48■■□□□ 1.51
LDB1-201ENST00000361198 CETN1Q12798 172 aa24.48■■□□□ 1.51
LDB1-201ENST00000361198 ARHGEF19Q8IW93 802 aa24.48■■□□□ 1.51
LDB1-201ENST00000361198 LRRC57Q8N9N7 239 aa24.48■■□□□ 1.51
LDB1-201ENST00000361198 SAAL1Q96ER3 474 aa24.48■■□□□ 1.51
LDB1-201ENST00000361198 UBE2TQ9NPD8 197 aaPredicted RBP24.48■■□□□ 1.51
LDB1-201ENST00000361198 XPNPEP1Q9NQW7 623 aa24.48■■□□□ 1.51
LDB1-201ENST00000361198 PDLIM7Q9NR12 457 aa24.48■■□□□ 1.51
LDB1-201ENST00000361198 GDF3Q9NR23 364 aa24.48■■□□□ 1.51
LDB1-201ENST00000361198 SEPT9Q9UHD8 586 aaPredicted RBP24.48■■□□□ 1.51
LDB1-201ENST00000361198 DAAM1Q9Y4D1 1078 aa24.48■■□□□ 1.51
LDB1-201ENST00000361198 MYH9P35579 1960 aaKnown RBP24.48■■□□□ 1.51
LDB1-201ENST00000361198 CLSTN1O94985 981 aa24.47■■□□□ 1.51
LDB1-201ENST00000361198 RFX1P22670 979 aa24.47■■□□□ 1.51
LDB1-201ENST00000361198 SNRNP35Q16560 246 aaKnown RBP24.47■■□□□ 1.51
LDB1-201ENST00000361198 SPIRE2Q8WWL2 714 aa24.47■■□□□ 1.51
LDB1-201ENST00000361198 TMEM117Q9H0C3 514 aa24.47■■□□□ 1.51
LDB1-201ENST00000361198 INTUQ9ULD6 942 aa24.47■■□□□ 1.51
LDB1-201ENST00000361198 ADGRA3Q8IWK6 1321 aa24.47■■□□□ 1.51
LDB1-201ENST00000361198 GOLGA8KD6RF30 607 aa24.47■■□□□ 1.51
LDB1-201ENST00000361198 PPFIA4O75335 1185 aa24.47■■□□□ 1.51
LDB1-201ENST00000361198 DGAT1O75907 488 aa24.47■■□□□ 1.51
LDB1-201ENST00000361198 GALCP54803 685 aa24.47■■□□□ 1.51
LDB1-201ENST00000361198 IFI16Q16666 785 aaKnown RBP24.47■■□□□ 1.51
LDB1-201ENST00000361198 ANKRD35Q8N283 1001 aa24.47■■□□□ 1.51
LDB1-201ENST00000361198 CHST13Q8NET6 341 aa24.47■■□□□ 1.51
LDB1-201ENST00000361198 TPCN2Q8NHX9 752 aa24.47■■□□□ 1.51
LDB1-201ENST00000361198 HVCN1Q96D96 273 aa24.47■■□□□ 1.51
LDB1-201ENST00000361198 C17orf75Q9HAS0 396 aa24.47■■□□□ 1.51
LDB1-201ENST00000361198 CYP26B1Q9NR63 512 aa24.47■■□□□ 1.51
LDB1-201ENST00000361198 SBF1O95248 1867 aa24.47■■□□□ 1.51
LDB1-201ENST00000361198 TMCO5BA8MYB1 307 aa24.46■■□□□ 1.51
LDB1-201ENST00000361198 CCDC172P0C7W6 258 aa24.46■■□□□ 1.51
LDB1-201ENST00000361198 STXBP2Q15833 593 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms