RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 CCDC134Q9H6E4 229 aa13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 PDP2Q9P2J9 529 aa13.99□□□□□ -0.17
SRGAP3-201ENST00000360413 ASAP2O43150 1006 aa13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 RASSF9O75901 435 aa13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 EIF4A2Q14240 407 aaKnown RBP13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 ITPRIPL1Q6GPH6 555 aa13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 CENPPQ6IPU0 288 aa13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 ZNF577Q9BSK1 485 aa13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 EPC1Q9H2F5 836 aa13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 CLK1P49759 484 aaKnown RBP13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 G2E3Q7L622 706 aa13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 GPKOWQ92917 476 aaPredicted RBP eCLIP13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 PRG3Q9Y2Y8 225 aaPredicted RBP13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 TARSL2A2RTX5 802 aaKnown RBP13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 KPNB1Q14974 876 aaKnown RBP13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 SLC10A5Q5PT55 438 aa13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 RC3H1Q5TC82 1133 aaKnown RBP13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 INPP5DQ92835 1189 aa13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 MRPL48Q96GC5 212 aaKnown RBP13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 IREB2P48200 963 aaKnown RBP13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 GALNT4Q8N4A0 578 aa13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 ZNF594Q96JF6 807 aaPredicted RBP13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 ZNF556Q9HAH1 456 aa13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 TBL3Q12788 808 aaKnown RBP13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 FANCBQ8NB91 859 aa13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 ST13P5Q8NFI4 369 aaPredicted RBP13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 OTULINQ96BN8 352 aa13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 FOXP1Q9H334 677 aaPredicted RBP13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 DPYSL4O14531 572 aa13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 TSC22D2O75157 780 aa13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 PPP1R37O75864 691 aa13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 PSAPP07602 524 aa13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 ATP6V1B1P15313 513 aa13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 PHKG1Q16816 387 aa13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 C16orf62Q7Z3J2 963 aa13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 KLRF2D3W0D1 207 aa13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 AKAP10O43572 662 aa13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 NSUN2Q08J23 767 aaKnown RBP eCLIP13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 KRR1Q13601 381 aaKnown RBP13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 SEC16BQ96JE7 1060 aa13.98□□□□□ -0.17
SRGAP3-201ENST00000360413 HSPH1Q92598 858 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 A0A0D9SFI3 127 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 ESYT3A0FGR9 886 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 TRIM71Q2Q1W2 868 aaKnown RBP13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 MFN1Q8IWA4 741 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 PNMA1Q8ND90 353 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 SLC40A1Q9NP59 571 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 CORO7P57737 925 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 NAALADL2Q58DX5 795 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 CLEC4FQ8N1N0 589 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 FOXP3Q9BZS1 431 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 RUBCNLQ9H714 662 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 NSMCE4AQ9NXX6 385 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 EDC4Q6P2E9 1401 aaKnown RBP13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 NPM3O75607 178 aaKnown RBP13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 PDIA3P30101 505 aaKnown RBP13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 SFSWAPQ12872 951 aaKnown RBP13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 CCDC149Q6ZUS6 474 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 TRPM8Q7Z2W7 1104 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 GINS4Q9BRT9 223 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 VPS11Q9H270 941 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 NPHS2Q9NP85 383 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 PAPOLBQ9NRJ5 636 aaKnown RBP13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 MAST1Q9Y2H9 1570 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 A2MP01023 1474 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 H7C0S8 307 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 DSG1Q02413 1049 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 CDH24Q86UP0 819 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 CEP95Q96GE4 821 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 DDX56Q9NY93 547 aaKnown RBP13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 USP15Q9Y4E8 981 aaPredicted RBP13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 FRMPD2Q68DX3 1309 aaPredicted RBP13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 ATP1A3P13637 1013 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 TFAMQ00059 246 aaKnown RBP13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 TRIM25Q14258 630 aaKnown RBP13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 RUBCNQ92622 972 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 FAM32AQ9Y421 112 aaKnown RBP13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 GRID2IPA4D2P6 1211 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 TK2O00142 265 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 TBC1D12O60347 775 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 DNAL1Q4LDG9 190 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 ALKBH8Q96BT7 664 aaKnown RBP13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 FAM89AQ96GI7 184 aa13.97□□□□□ -0.17
SRGAP3-201ENST00000360413 HADHAP40939 763 aa13.96□□□□□ -0.17
SRGAP3-201ENST00000360413 CAPZA2P47755 286 aa13.96□□□□□ -0.17
SRGAP3-201ENST00000360413 CTSWP56202 376 aa13.96□□□□□ -0.17
SRGAP3-201ENST00000360413 LRRC63Q05C16 580 aa13.96□□□□□ -0.17
SRGAP3-201ENST00000360413 ANGPT1Q15389 498 aa13.96□□□□□ -0.17
SRGAP3-201ENST00000360413 NFRKBQ6P4R8 1299 aa13.96□□□□□ -0.17
SRGAP3-201ENST00000360413 MB21D1Q8N884 522 aa13.96□□□□□ -0.17
SRGAP3-201ENST00000360413 AGBL1Q96MI9 1066 aa13.96□□□□□ -0.17
SRGAP3-201ENST00000360413 BBS2Q9BXC9 721 aa13.96□□□□□ -0.17
SRGAP3-201ENST00000360413 GUCA1CO95843 209 aa13.96□□□□□ -0.17
SRGAP3-201ENST00000360413 RALBP11234 206 aa13.96□□□□□ -0.17
SRGAP3-201ENST00000360413 COPB2P35606 906 aa13.96□□□□□ -0.17
SRGAP3-201ENST00000360413 SARM1Q6SZW1 724 aa13.96□□□□□ -0.17
SRGAP3-201ENST00000360413 CLMNQ96JQ2 1002 aa13.96□□□□□ -0.17
SRGAP3-201ENST00000360413 WWP1Q9H0M0 922 aa13.96□□□□□ -0.17
SRGAP3-201ENST00000360413 ERVV-2B6SEH9 535 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms