RNA–Protein interactions for RNA: ENST00000360212.6

CD46-206, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-206ENST00000360212 BTBD6Q96KE9 485 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 NAP1L3Q99457 506 aaPredicted RBP9.24□□□□□ -0.93
CD46-206ENST00000360212 CLIC5Q9NZA1 410 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 ATXN10Q9UBB4 475 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 TSPOAP1O95153 1857 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 MYH4Q9Y623 1939 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 GSTTP1A0A1W2PQM5 241 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 USP17L3A6NCW0 530 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 USP17L4A6NCW7 530 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 E2F6O75461 281 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 OR6B1O95007 311 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 VIL1P09327 827 aaKnown RBP9.24□□□□□ -0.93
CD46-206ENST00000360212 UQCRFS1P1P0C7P4 283 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 TAC1P20366 129 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 RPL13P26373 211 aaKnown RBP9.24□□□□□ -0.93
CD46-206ENST00000360212 VHLP40337 213 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 RTP1P59025 263 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 ACSBG2Q5FVE4 666 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 ZNF746Q6NUN9 644 aaPredicted RBP9.24□□□□□ -0.93
CD46-206ENST00000360212 IRGCQ6NXR0 463 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 USP17L1Q7RTZ2 530 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 SLC25A41Q8N5S1 370 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 WDR60Q8WVS4 1066 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 TTC1Q99614 292 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 MIPEPQ99797 713 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 BCAS3Q9H6U6 928 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 CCDC87Q9NVE4 849 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 STOML1Q9UBI4 398 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 PRKAG3Q9UGI9 489 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 ASIC3Q9UHC3 531 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 PHTF1Q9UMS5 762 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 USP20Q9Y2K6 914 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 LRCH1Q9Y2L9 728 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 NUMBLQ9Y6R0 609 aa9.24□□□□□ -0.93
CD46-206ENST00000360212 DISP2A7MBM2 1401 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 MAGEB3O15480 346 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 LRRN2O75325 713 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 USP1O94782 785 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 KRT18P05783 430 aaKnown RBP9.23□□□□□ -0.93
CD46-206ENST00000360212 GYG1P46976 350 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 RASSF2P50749 326 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 MESDQ14696 234 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 PUM3Q15397 648 aaKnown RBP9.23□□□□□ -0.93
CD46-206ENST00000360212 ECM1Q16610 540 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 ARHGAP44Q17R89 818 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 TMEM266Q2M3C6 531 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 SGSM1Q2NKQ1 1148 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 PABPC1LQ4VXU2 614 aaKnown RBP9.23□□□□□ -0.93
CD46-206ENST00000360212 UNC13DQ70J99 1090 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 LCA5Q86VQ0 697 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 GUF1Q8N442 669 aaKnown RBP9.23□□□□□ -0.93
CD46-206ENST00000360212 PRELID2Q8N945 189 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 EIF1ADQ8N9N8 165 aaKnown RBP9.23□□□□□ -0.93
CD46-206ENST00000360212 TBCKQ8TEA7 893 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 PRR11Q96HE9 360 aaPredicted RBP9.23□□□□□ -0.93
CD46-206ENST00000360212 FAM81BQ96LP2 452 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 THAP2Q9H0W7 228 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 STMN4Q9H169 189 aaPredicted RBP9.23□□□□□ -0.93
CD46-206ENST00000360212 LRMDAQ9H2I8 198 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 DDX18Q9NVP1 670 aaKnown RBP9.23□□□□□ -0.93
CD46-206ENST00000360212 RASAL2Q9UJF2 1139 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 A0A0G2JND7 137 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 CLIC2O15247 247 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 THAP12O43422 761 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 TDP2O95551 362 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 ZBTB48P10074 688 aaPredicted RBP9.23□□□□□ -0.93
CD46-206ENST00000360212 NR2F2P24468 414 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 POLGP54098 1239 aaPredicted RBP9.23□□□□□ -0.93
CD46-206ENST00000360212 CDR2Q01850 454 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 COASYQ13057 564 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.23□□□□□ -0.93
CD46-206ENST00000360212 OLFML1Q6UWY5 402 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 LRRC74BQ6ZQY2 392 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 SAPCD2Q86UD0 394 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 VPS52Q8N1B4 723 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 RIBC1Q8N443 379 aaPredicted RBP9.23□□□□□ -0.93
CD46-206ENST00000360212 VGLL2Q8N8G2 317 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 CTNNBL1Q8WYA6 563 aaPredicted RBP9.23□□□□□ -0.93
CD46-206ENST00000360212 ATG4AQ8WYN0 398 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 STMN2Q93045 179 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 MCUR1Q96AQ8 359 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 DYNLL2Q96FJ2 89 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 HIC2Q96JB3 615 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 PNMA5Q96PV4 448 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 GANQ9H2C0 597 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 SUCLA2Q9P2R7 463 aaPredicted RBP9.23□□□□□ -0.93
CD46-206ENST00000360212 HDAC9Q9UKV0 1011 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 NEO1Q92859 1461 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 DIP2BQ9P265 1576 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 RASA4BC9J798 803 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 POC1B-GALNT4F8VUJ3 575 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 PDLIM1O00151 329 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 RASA4O43374 803 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 SUPT3HO75486 399 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 HNRNPCP07910 306 aaKnown RBP eCLIP9.23□□□□□ -0.93
CD46-206ENST00000360212 DLATP10515 647 aaKnown RBP9.23□□□□□ -0.93
CD46-206ENST00000360212 SLC5A1P13866 664 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 MARK3P27448 753 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 LRRC63Q05C16 580 aa9.23□□□□□ -0.93
CD46-206ENST00000360212 CALCOCO2Q13137 446 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms