RNA–Protein interactions for RNA: ENST00000360047.9

PDE4D-205, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 3,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-205ENST00000360047 PGK2P07205 417 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 HALP42357 657 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 FLT3LGP49771 235 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 CDKN1CP49918 316 aaPredicted RBP5.39□□□□□ -1.55
PDE4D-205ENST00000360047 COPAP53621 1224 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 PRMT2P55345 433 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 FUT2Q10981 343 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 COX10Q12887 443 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 MAP2K5Q13163 448 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 TMEM95Q3KNT9 176 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 GRAMD1BQ3KR37 738 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 CYP26C1Q6V0L0 522 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 CTU1Q7Z7A3 348 aaKnown RBP5.39□□□□□ -1.55
PDE4D-205ENST00000360047 LUZP1Q86V48 1076 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 CCDC150Q8NCX0 1101 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 KCTD12Q96CX2 325 aaKnown RBP5.39□□□□□ -1.55
PDE4D-205ENST00000360047 C8orf76Q96K31 380 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 EHMT1Q9H9B1 1298 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 BARHL2Q9NY43 387 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 ADD3Q9UEY8 706 aaKnown RBP5.39□□□□□ -1.55
PDE4D-205ENST00000360047 SRRDQ9UH36 339 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 C2CD2Q9Y426 696 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 NID2Q14112 1375 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 STK36Q9NRP7 1315 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 EME2A4GXA9 379 aaPredicted RBP5.39□□□□□ -1.55
PDE4D-205ENST00000360047 SPDYE3A6NKU9 549 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 ZSCAN9O15535 394 aaPredicted RBP5.39□□□□□ -1.55
PDE4D-205ENST00000360047 SNX2O60749 519 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 PPP1R11O60927 126 aaPredicted RBP5.39□□□□□ -1.55
PDE4D-205ENST00000360047 NBNO60934 754 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 AP1G2O75843 785 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 CTDNEP1O95476 244 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 GJB2P29033 226 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 HOXA13P31271 388 aaPredicted RBP5.39□□□□□ -1.55
PDE4D-205ENST00000360047 TXLNAP40222 546 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 MATR3P43243 847 aaKnown RBP eCLIP5.39□□□□□ -1.558e-7■■■■□ 21.5
PDE4D-205ENST00000360047 CLCN2P51788 898 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 SEC13P55735 322 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 PRKCZQ05513 592 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 ARHGEF16Q5VV41 709 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 E4F1Q66K89 784 aaPredicted RBP5.39□□□□□ -1.55
PDE4D-205ENST00000360047 ABRAQ8N0Z2 381 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 TBC1D5Q92609 795 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 PGBD4Q96DM1 585 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 TCHPQ9BT92 498 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 C2orf49Q9BVC5 232 aaPredicted RBP5.39□□□□□ -1.55
PDE4D-205ENST00000360047 PARD6BQ9BYG5 372 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 PHACTR1Q9C0D0 580 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 GBP3Q9H0R5 595 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 NUP62CLQ9H1M0 184 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 PDE11AQ9HCR9 933 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 RAB21Q9UL25 225 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 PTPRFP10586 1907 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 LOC285556D6RIA3 1793 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 A6NJY4 79 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 AHCYL1O43865 530 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 MYL3P08590 195 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 CCDC159P0C7I6 412 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 RPL17P18621 184 aaKnown RBP5.39□□□□□ -1.55
PDE4D-205ENST00000360047 HSD3B2P26439 372 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 STT3AP46977 705 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 SMTNP53814 917 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 RPS6P62753 249 aaKnown RBP5.39□□□□□ -1.55
PDE4D-205ENST00000360047 GUCY1B3Q02153 619 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 BEND6Q5SZJ8 279 aaPredicted RBP5.39□□□□□ -1.55
PDE4D-205ENST00000360047 MFSD14CQ5VZR4 134 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 OTOP1Q7RTM1 612 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 YTHDF3Q7Z739 585 aaKnown RBP5.39□□□□□ -1.55
PDE4D-205ENST00000360047 TMCO5AQ8N6Q1 288 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 CLEC4DQ8WXI8 215 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 ZNF75CPQ92670 426 aaPredicted RBP5.39□□□□□ -1.55
PDE4D-205ENST00000360047 AIFM3Q96NN9 605 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 VIPAS39Q9H9C1 493 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 DDX19AQ9NUU7 478 aaKnown RBP5.39□□□□□ -1.55
PDE4D-205ENST00000360047 CYP39A1Q9NYL5 469 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 CEP72Q9P209 647 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 GABRQQ9UN88 632 aa5.39□□□□□ -1.55
PDE4D-205ENST00000360047 LRRC10BA6NIK2 292 aa5.38□□□□□ -1.55
PDE4D-205ENST00000360047 ASB14A6NK59 587 aa5.38□□□□□ -1.55
PDE4D-205ENST00000360047 A6NNZ2 444 aa5.38□□□□□ -1.55
PDE4D-205ENST00000360047 ADCY3O60266 1144 aa5.38□□□□□ -1.55
PDE4D-205ENST00000360047 FESP07332 822 aa5.38□□□□□ -1.55
PDE4D-205ENST00000360047 MYCLP12524 364 aaPredicted RBP5.38□□□□□ -1.55
PDE4D-205ENST00000360047 EZRP15311 586 aaKnown RBP5.38□□□□□ -1.55
PDE4D-205ENST00000360047 PDCP20941 246 aa5.38□□□□□ -1.55
PDE4D-205ENST00000360047 ZNF76P36508 570 aa5.38□□□□□ -1.55
PDE4D-205ENST00000360047 AARSP49588 968 aaKnown RBP eCLIP5.38□□□□□ -1.55
PDE4D-205ENST00000360047 CNTN2Q02246 1040 aa5.38□□□□□ -1.55
PDE4D-205ENST00000360047 SFSWAPQ12872 951 aaKnown RBP5.38□□□□□ -1.55
PDE4D-205ENST00000360047 MRPL28Q13084 256 aaKnown RBP5.38□□□□□ -1.55
PDE4D-205ENST00000360047 GRB14Q14449 540 aa5.38□□□□□ -1.55
PDE4D-205ENST00000360047 TUBB8Q3ZCM7 444 aa5.38□□□□□ -1.55
PDE4D-205ENST00000360047 ACBD5Q5T8D3 534 aaPredicted RBP5.38□□□□□ -1.55
PDE4D-205ENST00000360047 USP17L6PQ6QN14 398 aa5.38□□□□□ -1.55
PDE4D-205ENST00000360047 B4GALNT4Q76KP1 1039 aa5.38□□□□□ -1.55
PDE4D-205ENST00000360047 MFN1Q8IWA4 741 aa5.38□□□□□ -1.55
PDE4D-205ENST00000360047 BRSK2Q8IWQ3 736 aa5.38□□□□□ -1.55
PDE4D-205ENST00000360047 TRMT44Q8IYL2 757 aaKnown RBP5.38□□□□□ -1.55
PDE4D-205ENST00000360047 TEX19Q8NA77 164 aa5.38□□□□□ -1.55
PDE4D-205ENST00000360047 OR8K1Q8NGG5 319 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms