RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.06□□□□□ -0.8
GTF3C2-202ENST00000359541 WRAP73Q9P2S5 460 aaPredicted RBP10.06□□□□□ -0.8
GTF3C2-202ENST00000359541 MYH10P35580 1976 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 ESYT3A0FGR9 886 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 MYZAPP0CAP1 466 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 MAPK7Q13164 816 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 NT5DC3Q86UY8 548 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 GPATCH11Q8N954 259 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 LNX1Q8TBB1 728 aaPredicted RBP10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 CEP170P1Q96L14 293 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 RUNDC3BQ96NL0 473 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 CAMKK2Q96RR4 588 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 AP1M1Q9BXS5 423 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 TMOD4Q9NZQ9 345 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 RSPH14Q9UHP6 348 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 ZNF536O15090 1300 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 HMGB1P1B2RPK0 211 aaPredicted RBP10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 BUB1BO60566 1050 aaPredicted RBP10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 FGGP02679 453 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 VCAM1P19320 739 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 PTPROQ16827 1216 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 NSUN6Q8TEA1 469 aaKnown RBP10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 SCFD2Q8WU76 684 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 CASKIN2Q8WXE0 1202 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 CENPHQ9H3R5 247 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 PXMP2Q9NR77 195 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 RTN2O75298 545 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 TGFB2P61812 414 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 IFFO1Q0D2I5 559 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 ITGB3BPQ13352 177 aaPredicted RBP10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 DNAJC21Q5F1R6 531 aaKnown RBP10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 DPY19L2P1Q6NXN4 242 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 LRIG3Q6UXM1 1119 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 FAM43BQ6ZT52 329 aaPredicted RBP10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 DAW1Q8N136 415 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 IL31RAQ8NI17 732 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 SLC30A5Q8TAD4 765 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 POMGNT1Q8WZA1 660 aa10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 MOV10L1Q9BXT6 1211 aaKnown RBP10.05□□□□□ -0.8
GTF3C2-202ENST00000359541 FOXN3O00409 490 aaPredicted RBP10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 EBAG9O00559 213 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 GNGT1P63211 74 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 ENOSF1Q7L5Y1 443 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 RPUSD2Q8IZ73 545 aaKnown RBP10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 RASGEF1CQ8N431 466 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 TMEM174Q8WUU8 243 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 HES6Q96HZ4 224 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 ZIM3Q96PE6 472 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 SH3GL2Q99962 352 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 CBWD1Q9BRT8 395 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 STRA6Q9BX79 667 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 DDX47Q9H0S4 455 aaKnown RBP10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 GOLPH3Q9H4A6 298 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 PLEKHA4Q9H4M7 779 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 KIAA1586Q9HCI6 787 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 PRM3Q9NNZ6 103 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 COL20A1Q9P218 1284 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 PARP2Q9UGN5 583 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 TTC7AQ9ULT0 858 aaPredicted RBP10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 DENND3A2RUS2 1198 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 BACH1O14867 736 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 PMM2O15305 246 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 SPOPO43791 374 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 STAM2O75886 525 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 GGPS1O95749 300 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 SCP2P22307 547 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 CTNNA1P35221 906 aaKnown RBP10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 OAZ1P54368 228 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 NCKAP1LP55160 1127 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 STRN3Q13033 797 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 SPP2Q13103 211 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 SNRNP35Q16560 246 aaKnown RBP10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 ODF2Q5BJF6 829 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 CDAN1Q8IWY9 1227 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 UBLCP1Q8WVY7 318 aaPredicted RBP10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 CCDC127Q96BQ5 260 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 BCAS3Q9H6U6 928 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 TMEM59LQ9UK28 342 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 LOXHD1Q8IVV2 1947 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 ATAD5Q96QE3 1844 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 FAM187AA6NFU0 413 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 HNRNPDLO14979 420 aaKnown RBP10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 DHX15O43143 795 aaKnown RBP10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 DGAT1O75907 488 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 FTLP02792 175 aaPredicted RBP10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 GZMAP12544 262 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 GTF2H1P32780 548 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 DHX34Q14147 1143 aaKnown RBP10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 WDR44Q5JSH3 913 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 CEP85LQ5SZL2 805 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 C11orf63Q6NUN7 778 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 CROCCP2Q86T23 111 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 SPIRE2Q8WWL2 714 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 ZBED3Q96IU2 234 aaPredicted RBP10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 RNPC3Q96LT9 517 aaKnown RBP10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 FNBP1Q96RU3 617 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 TMEM8AQ9HCN3 771 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 MTRF1LQ9UGC7 380 aaKnown RBP10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 AJAP1Q9UKB5 411 aaPredicted RBP10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 TBX20Q9UMR3 447 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms