RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 TMX1Q9H3N1 280 aa7.22□□□□□ -1.25
CCDC196-201ENST00000359454 JPH1Q9HDC5 661 aaPredicted RBP7.22□□□□□ -1.25
CCDC196-201ENST00000359454 TIMMDC1Q9NPL8 285 aa7.22□□□□□ -1.25
CCDC196-201ENST00000359454 JADE2Q9NQC1 790 aa7.22□□□□□ -1.25
CCDC196-201ENST00000359454 C1orf112Q9NSG2 853 aa7.22□□□□□ -1.25
CCDC196-201ENST00000359454 LZTS1Q9Y250 596 aa7.22□□□□□ -1.25
CCDC196-201ENST00000359454 PCDHGC5Q9Y5F6 944 aa7.22□□□□□ -1.25
CCDC196-201ENST00000359454 KIAA1671Q9BY89 1806 aa7.22□□□□□ -1.25
CCDC196-201ENST00000359454 SPDYE3A6NKU9 549 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 TBKBP1A7MCY6 615 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 EML1O00423 815 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 DDAH1O94760 285 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 CYP21A2P08686 494 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 HOXB8P17481 243 aaPredicted RBP7.21□□□□□ -1.26
CCDC196-201ENST00000359454 LAG3P18627 525 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 IBSPP21815 317 aaPredicted RBP7.21□□□□□ -1.26
CCDC196-201ENST00000359454 TECP42680 631 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 STAT5BP51692 787 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 ERVFC1P60507 584 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 SETQ01105 290 aaPredicted RBP7.21□□□□□ -1.26
CCDC196-201ENST00000359454 NFX1Q12986 1120 aaKnown RBP7.21□□□□□ -1.26
CCDC196-201ENST00000359454 KCNC3Q14003 757 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 PLCB4Q15147 1175 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 SH3PXD2AQ5TCZ1 1133 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 PHLDB3Q6NSJ2 640 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 ANKRD54Q6NXT1 300 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 MTHFD1LQ6UB35 978 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 SLC24A5Q71RS6 500 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 PLPPR4Q7Z2D5 763 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 UBALD2Q8IYN6 164 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 THNSL1Q8IYQ7 743 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 COLGALT1Q8NBJ5 622 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 C1orf216Q8TAB5 229 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 RASGRP4Q8TDF6 673 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 ANP32BQ92688 251 aaKnown RBP7.21□□□□□ -1.26
CCDC196-201ENST00000359454 PCYT2Q99447 389 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 SDF4Q9BRK5 362 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 PDCL3Q9H2J4 239 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 PSTPIP2Q9H939 334 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 ERVK-5Q9HDB9 667 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 RGS18Q9NS28 235 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 TMEM260Q9NX78 707 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 SLC9A2Q9UBY0 812 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 PUF60Q9UHX1 559 aaKnown RBP7.21□□□□□ -1.26
CCDC196-201ENST00000359454 NR2E1Q9Y466 385 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 NFASCO94856 1347 aa7.21□□□□□ -1.26
CCDC196-201ENST00000359454 PLXNA4Q9HCM2 1894 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 DENND3A2RUS2 1198 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 C9IYK1 514 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 E7EWF7 191 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 H0Y858 1186 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 GPR182O15218 404 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 MGEA5O60502 916 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 RPS6KA5O75582 802 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 SLC26A2P50443 739 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 ACTR2P61160 394 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 FAM193AP78312 1265 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 PLCB3Q01970 1234 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 TMEM266Q2M3C6 531 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 AXDND1Q5T1B0 1012 aaPredicted RBP7.2□□□□□ -1.26
CCDC196-201ENST00000359454 FAM102BQ5T8I3 360 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 PLPP4Q5VZY2 271 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 SYCE2Q6PIF2 218 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 ZNF654Q8IZM8 581 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 KREMEN2Q8NCW0 462 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 IGDCC4Q8TDY8 1250 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 TRAPPC12Q8WVT3 735 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 RUFY2Q8WXA3 655 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 MRPS27Q92552 414 aaKnown RBP7.2□□□□□ -1.26
CCDC196-201ENST00000359454 NECTIN4Q96NY8 510 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 ADAM2Q99965 735 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 TCF25Q9BQ70 676 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 MXRA8Q9BRK3 442 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 IL25Q9H293 177 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 ELAC1Q9H777 363 aaKnown RBP7.2□□□□□ -1.26
CCDC196-201ENST00000359454 ATP6V0A4Q9HBG4 840 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 NGRNQ9NPE2 291 aaKnown RBP7.2□□□□□ -1.26
CCDC196-201ENST00000359454 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.2□□□□□ -1.26
CCDC196-201ENST00000359454 ENTPD7Q9NQZ7 604 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 TYW1Q9NV66 732 aaKnown RBP7.2□□□□□ -1.26
CCDC196-201ENST00000359454 TMEM161AQ9NX61 479 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 PCDHA6Q9UN73 950 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 SORCS3Q9UPU3 1222 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 NOC2LQ9Y3T9 749 aaKnown RBP7.2□□□□□ -1.26
CCDC196-201ENST00000359454 PCDHA8Q9Y5H6 950 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 COL1A2P08123 1366 aa7.2□□□□□ -1.26
CCDC196-201ENST00000359454 BAZ2BQ9UIF8 2168 aaKnown RBP7.19□□□□□ -1.26
CCDC196-201ENST00000359454 A0A1B0GTH6 734 aa7.19□□□□□ -1.26
CCDC196-201ENST00000359454 HBP1O60381 514 aa7.19□□□□□ -1.26
CCDC196-201ENST00000359454 PLEKHA8P1O95397 391 aa7.19□□□□□ -1.26
CCDC196-201ENST00000359454 PDGFBP01127 241 aaPredicted RBP7.19□□□□□ -1.26
CCDC196-201ENST00000359454 KLRC1P26715 233 aa7.19□□□□□ -1.26
CCDC196-201ENST00000359454 PPM1AP35813 382 aa7.19□□□□□ -1.26
CCDC196-201ENST00000359454 TXLNAP40222 546 aa7.19□□□□□ -1.26
CCDC196-201ENST00000359454 NBL1P41271 181 aa7.19□□□□□ -1.26
CCDC196-201ENST00000359454 ANTXR2P58335 489 aa7.19□□□□□ -1.26
CCDC196-201ENST00000359454 FAM189BP81408 668 aa7.19□□□□□ -1.26
CCDC196-201ENST00000359454 PTSQ03393 145 aa7.19□□□□□ -1.26
CCDC196-201ENST00000359454 PTH1RQ03431 593 aa7.19□□□□□ -1.26
CCDC196-201ENST00000359454 KRT17Q04695 432 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms