RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 ZDHHC18Q9NUE0 388 aa12.25□□□□□ -0.45
CNOT3-202ENST00000358389 TSPOAP1O95153 1857 aa12.25□□□□□ -0.45
CNOT3-202ENST00000358389 KDM3BQ7LBC6 1761 aa12.25□□□□□ -0.45
CNOT3-202ENST00000358389 A0A0G2JND7 137 aa12.25□□□□□ -0.45
CNOT3-202ENST00000358389 GJB6O95452 261 aa12.25□□□□□ -0.45
CNOT3-202ENST00000358389 GSTA2P09210 222 aa12.25□□□□□ -0.45
CNOT3-202ENST00000358389 GNAZP19086 355 aa12.25□□□□□ -0.45
CNOT3-202ENST00000358389 KCNQ4P56696 695 aa12.25□□□□□ -0.45
CNOT3-202ENST00000358389 KHDC1Q4VXA5 237 aaKnown RBP12.25□□□□□ -0.45
CNOT3-202ENST00000358389 TAF1BQ53T94 588 aaPredicted RBP12.25□□□□□ -0.45
CNOT3-202ENST00000358389 HP1BP3Q5SSJ5 553 aaPredicted RBP12.25□□□□□ -0.45
CNOT3-202ENST00000358389 FYB2Q5VWT5 728 aa12.25□□□□□ -0.45
CNOT3-202ENST00000358389 BTNL9Q6UXG8 535 aa12.25□□□□□ -0.45
CNOT3-202ENST00000358389 MYLK4Q86YV6 388 aaPredicted RBP12.25□□□□□ -0.45
CNOT3-202ENST00000358389 APLFQ8IW19 511 aaPredicted RBP12.25□□□□□ -0.45
CNOT3-202ENST00000358389 REXO1Q8N1G1 1221 aaKnown RBP12.25□□□□□ -0.45
CNOT3-202ENST00000358389 SNRNP27Q8WVK2 155 aaKnown RBP12.25□□□□□ -0.45
CNOT3-202ENST00000358389 SPIRE2Q8WWL2 714 aa12.25□□□□□ -0.45
CNOT3-202ENST00000358389 RAD54LQ92698 747 aa12.25□□□□□ -0.45
CNOT3-202ENST00000358389 POP1Q99575 1024 aaKnown RBP12.25□□□□□ -0.45
CNOT3-202ENST00000358389 TTC1Q99614 292 aa12.25□□□□□ -0.45
CNOT3-202ENST00000358389 NUDT12Q9BQG2 462 aa12.25□□□□□ -0.45
CNOT3-202ENST00000358389 UBN1Q9NPG3 1134 aa12.25□□□□□ -0.45
CNOT3-202ENST00000358389 BLOC1S4Q9NUP1 217 aa12.25□□□□□ -0.45
CNOT3-202ENST00000358389 PHTF1Q9UMS5 762 aa12.25□□□□□ -0.45
CNOT3-202ENST00000358389 MYO5AQ9Y4I1 1855 aaKnown RBP12.25□□□□□ -0.45
CNOT3-202ENST00000358389 USP17L3A6NCW0 530 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 USP17L4A6NCW7 530 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 WFS1O76024 890 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 ECEL1O95672 775 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 GM2AP17900 193 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 CHRNA3P32297 505 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 ADCY8P40145 1251 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 TMED1Q13445 227 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 MAP7Q14244 749 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 TRAPPC3LQ5T215 181 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 PHLDB3Q6NSJ2 640 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 ASRGL1Q7L266 308 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 USP17L1Q7RTZ2 530 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 CFAP61Q8NHU2 1237 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 MIPOL1Q8TD10 442 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 ZFAND2BQ8WV99 257 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 C1orf54Q8WWF1 131 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 BICD1Q96G01 975 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 BORCS6Q96GS4 357 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 C9orf72Q96LT7 481 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 EPB41L4BQ9H329 900 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 CNOT7Q9UIV1 285 aaKnown RBP12.24□□□□□ -0.45
CNOT3-202ENST00000358389 CHMP2BQ9UQN3 213 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 RPS6KL1Q9Y6S9 549 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 FLT1P17948 1338 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 MROH5Q6ZUA9 1318 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 KLRF2D3W0D1 207 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 E7ENQ6 273 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 PHF2O75151 1096 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 MKRN3Q13064 507 aaKnown RBP12.24□□□□□ -0.45
CNOT3-202ENST00000358389 ZDHHC24Q6UX98 284 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 ANKRD35Q8N283 1001 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 ERMNQ8TAM6 284 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 RFFLQ8WZ73 363 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 MMADHCQ9H3L0 296 aaPredicted RBP12.24□□□□□ -0.45
CNOT3-202ENST00000358389 PREBQ9HCU5 417 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 NPHS2Q9NP85 383 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 KIAA1024Q9UPX6 916 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 MED1Q15648 1581 aaPredicted RBP12.24□□□□□ -0.45
CNOT3-202ENST00000358389 DDX3XO00571 662 aaKnown RBP eCLIP12.24□□□□□ -0.452e-7■■■■■ 33.6
CNOT3-202ENST00000358389 DESP17661 470 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 CA4P22748 312 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 LRRC36Q1X8D7 754 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 EAPPQ56P03 285 aaPredicted RBP12.24□□□□□ -0.45
CNOT3-202ENST00000358389 KCNK18Q7Z418 384 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 IRF2BP2Q7Z5L9 587 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 NLRP10Q86W26 655 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 NYXQ9GZU5 481 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 LARSQ9P2J5 1176 aaKnown RBP12.24□□□□□ -0.45
CNOT3-202ENST00000358389 ABCB11O95342 1321 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 NID2Q14112 1375 aa12.24□□□□□ -0.45
CNOT3-202ENST00000358389 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.23□□□□□ -0.45
CNOT3-202ENST00000358389 E9PMD0 336 aa12.23□□□□□ -0.45
CNOT3-202ENST00000358389 CHMP2AO43633 222 aa12.23□□□□□ -0.45
CNOT3-202ENST00000358389 TDP2O95551 362 aa12.23□□□□□ -0.45
CNOT3-202ENST00000358389 POTEJP0CG39 1038 aa12.23□□□□□ -0.45
CNOT3-202ENST00000358389 MTFR1Q15390 333 aa12.23□□□□□ -0.45
CNOT3-202ENST00000358389 TRIM59Q8IWR1 403 aa12.23□□□□□ -0.45
CNOT3-202ENST00000358389 RASGEF1CQ8N431 466 aa12.23□□□□□ -0.45
CNOT3-202ENST00000358389 PHC3Q8NDX5 983 aa12.23□□□□□ -0.45
CNOT3-202ENST00000358389 GRAMD1AQ96CP6 724 aa12.23□□□□□ -0.45
CNOT3-202ENST00000358389 CENPKQ9BS16 269 aa12.23□□□□□ -0.45
CNOT3-202ENST00000358389 DISP2A7MBM2 1401 aa12.23□□□□□ -0.45
CNOT3-202ENST00000358389 ABLIM1O14639 778 aa12.23□□□□□ -0.45
CNOT3-202ENST00000358389 FAM200BP0CF97 657 aa12.23□□□□□ -0.45
CNOT3-202ENST00000358389 MGAT5Q09328 741 aa12.23□□□□□ -0.45
CNOT3-202ENST00000358389 KPNB1Q14974 876 aaKnown RBP12.23□□□□□ -0.45
CNOT3-202ENST00000358389 RFWD3Q6PCD5 774 aa12.23□□□□□ -0.45
CNOT3-202ENST00000358389 C4orf33Q8N1A6 199 aa12.23□□□□□ -0.45
CNOT3-202ENST00000358389 DYNLL2Q96FJ2 89 aa12.23□□□□□ -0.45
CNOT3-202ENST00000358389 MAGEB18Q96M61 343 aa12.23□□□□□ -0.45
CNOT3-202ENST00000358389 CEP63Q96MT8 703 aa12.23□□□□□ -0.45
CNOT3-202ENST00000358389 TRAPPC9Q96Q05 1148 aa12.23□□□□□ -0.45
CNOT3-202ENST00000358389 MMTAG2Q9BU76 263 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms