RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 PTPRMP28827 1452 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 TTC36A6NLP5 189 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 OSTNP61366 133 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 TRIM65Q6PJ69 517 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 ATP11CQ8NB49 1132 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 SGSM3Q96HU1 749 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 DNAJC7Q99615 494 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 LACRTQ9GZZ8 138 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 SUDS3Q9H7L9 328 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 EHD2Q9NZN4 543 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 INO80Q9ULG1 1556 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 RASSF10A6NK89 507 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 CCT8L1PA6NM43 557 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 CALB1P05937 261 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 SLC9A1P19634 815 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 EPHB1P54762 984 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 IFRD2Q12894 506 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 PDIA6Q15084 440 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 PAPD7Q5XG87 772 aaKnown RBP16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 SESTD1Q86VW0 696 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 HSPH1Q92598 858 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 OVOS2A0A0J9YW53 1432 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 OVOS2Q6IE36 1432 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 PTPRUQ92729 1446 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 EYA4O95677 639 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 SRGAP2BP0DMP2 458 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 DEUP1Q05D60 604 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 ST3GAL1Q11201 340 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 EIF2AK1Q9BQI3 630 aaKnown RBP16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 SMYD3Q9H7B4 428 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 SLC40A1Q9NP59 571 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 PHF2O75151 1096 aa16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 RTN2O75298 545 aa16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 HSPA4LO95757 839 aa16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 NMT1P30419 496 aaKnown RBP16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 KPNA2P52292 529 aaKnown RBP16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 CACNB3P54284 484 aa16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 PHEXP78562 749 aa16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 SBK1Q52WX2 424 aa16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 NCAPG2Q86XI2 1143 aa16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 ERP44Q9BS26 406 aa16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 IPO11Q9UI26 975 aaKnown RBP16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 DBR1Q9UK59 544 aaKnown RBP16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 CSADQ9Y600 493 aa16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 DUSP10Q9Y6W6 482 aa16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 PLEKP08567 350 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 LRRC43Q8N309 656 aa16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 FLAD1Q8NFF5 587 aa16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 FAM96AQ9H5X1 160 aa16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 PRDM4Q9UKN5 801 aa16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 CNTNAP5Q8WYK1 1306 aa16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 F5H6K3 240 aa16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 M0QZ92 97 aa16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 CCND2P30279 289 aa16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 KLRC3Q07444 240 aa16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 PLCB4Q15147 1175 aa16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 CDO1Q16878 200 aa16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 PPP6R3Q5H9R7 873 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 JAMLQ86YT9 394 aa16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 ARL8AQ96BM9 186 aa16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 FAM213AQ9BRX8 229 aa16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 MAGED2Q9UNF1 606 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC11-202ENST00000357207 DENND3A2RUS2 1198 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 UBE2Q2LH0YL09 131 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 FOXP2O15409 715 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 PRLRP16471 622 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 AP2B1P63010 937 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 ZNF667Q5HYK9 610 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 KDM7AQ6ZMT4 941 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 LRRN4CLQ8ND94 238 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 MYCBPAPQ8TBZ2 947 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 HEXIM2Q96MH2 286 aaKnown RBP16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 TRABDQ9H4I3 376 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 NDE1Q9NXR1 346 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 FIS1Q9Y3D6 152 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 XPOTO43592 962 aaKnown RBP16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 P4HBP07237 508 aaKnown RBP16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 SCP2P22307 547 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 JAK3P52333 1124 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 TROAPQ12815 778 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 ENOSF1Q7L5Y1 443 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 MARCH10Q8NA82 808 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 TRIM56Q9BRZ2 755 aaKnown RBP16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 AGXT2Q9BYV1 514 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 YY1AP1Q9H869 796 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 CEMIPQ8WUJ3 1361 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 ITIH2P19823 946 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 FBXL13Q8NEE6 735 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 SYN2Q92777 582 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 CELF4Q9BZC1 486 aaKnown RBP16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 UPF3AQ9H1J1 476 aaKnown RBP16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 ANKZF1Q9H8Y5 726 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 TBC1D22BQ9NU19 505 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 NPHP3-ACAD11A0A0J9YXS1 232 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 FAM196BA6NMK8 535 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 SLC16A3O15427 465 aaKnown RBP16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 LPXNO60711 386 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms