RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 TROVE2P10155 538 aaKnown RBP eCLIP13.43□□□□□ -0.26
BDNF-202ENST00000356660 HSPA6P17066 643 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 RASA1P20936 1047 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 THEMIS2Q5TEJ8 643 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 NT5DC3Q86UY8 548 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 PDCD7Q8N8D1 485 aaKnown RBP13.43□□□□□ -0.26
BDNF-202ENST00000356660 BTBD6Q96KE9 485 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 REEP2Q9BRK0 252 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 DLGAP2Q9P1A6 1054 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 SCOCQ9UIL1 159 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 ZNF148Q9UQR1 794 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 USH1CQ9Y6N9 552 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 PALM3A6NDB9 673 aaPredicted RBP13.43□□□□□ -0.26
BDNF-202ENST00000356660 DDX3XO00571 662 aaKnown RBP eCLIP13.43□□□□□ -0.26
BDNF-202ENST00000356660 CLDN3O15551 220 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 AKAP3O75969 853 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 NOL4O94818 638 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 SNUPNO95149 360 aaKnown RBP13.43□□□□□ -0.26
BDNF-202ENST00000356660 TTLL1O95922 423 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 CD19P15391 556 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 GCLMP48507 274 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 SLC8A3P57103 927 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 WDR44Q5JSH3 913 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 ANKRD20A2Q5SQ80 823 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 ANKRD20A1Q5TYW2 823 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 BZW1Q7L1Q6 419 aaKnown RBP13.43□□□□□ -0.26
BDNF-202ENST00000356660 PPP1R14CQ8TAE6 165 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 AMNQ9BXJ7 453 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 ALG13Q9NP73 1137 aaKnown RBP13.43□□□□□ -0.26
BDNF-202ENST00000356660 RGL1Q9NZL6 768 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 ATRNO75882 1429 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 TNNI1P19237 187 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 KRT17Q04695 432 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 ZC2HC1CQ53FD0 456 aaPredicted RBP13.43□□□□□ -0.26
BDNF-202ENST00000356660 MIER3Q7Z3K6 550 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 APBB1IPQ7Z5R6 666 aaPredicted RBP13.43□□□□□ -0.26
BDNF-202ENST00000356660 FRMD5Q7Z6J6 570 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 RHOT2Q8IXI1 618 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 SLFN12Q8IYM2 578 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 CFAP61Q8NHU2 1237 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 TMEM237Q96Q45 408 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 SETD1AO15047 1707 aaKnown RBP13.43□□□□□ -0.26
BDNF-202ENST00000356660 CRYBG1Q9Y4K1 1723 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 FLT1P17948 1338 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 PPEF1O14829 653 aaPredicted RBP13.42□□□□□ -0.26
BDNF-202ENST00000356660 PHF2O75151 1096 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 GSTA1P08263 222 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 KRT16P08779 473 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 CYP11B2P19099 503 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 MTM1Q13496 603 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 ASPRV1Q53RT3 343 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 ARMC3Q5W041 872 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 TMEM154Q6P9G4 183 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 PPP1R21Q6ZMI0 780 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 CHURC1Q8WUH1 139 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 NAF1Q96HR8 494 aaKnown RBP13.42□□□□□ -0.26
BDNF-202ENST00000356660 CYTH2Q99418 400 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 ABCB11O95342 1321 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 MYH13Q9UKX3 1938 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 K7ENM7 598 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 ASAP2O43150 1006 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 BBOX1O75936 387 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 COMTP21964 271 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 MAPK4P31152 587 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 RPL21P46778 160 aaKnown RBP13.42□□□□□ -0.26
BDNF-202ENST00000356660 FXR2P51116 673 aaKnown RBP eCLIP13.42□□□□□ -0.26
BDNF-202ENST00000356660 C6orf89Q6UWU4 347 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 C4orf33Q8N1A6 199 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 NLGN1Q8N2Q7 840 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 ANO3Q9BYT9 981 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 TYW1Q9NV66 732 aaKnown RBP13.42□□□□□ -0.26
BDNF-202ENST00000356660 CTNNAL1Q9UBT7 734 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 PNMA6FA0A0J9YX94 578 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 GOLGA8IPA6NC78 632 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 GOLGA8JA6NMD2 632 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 MMP10P09238 476 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 GPC5P78333 572 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 RCN2Q14257 317 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 SBK1Q52WX2 424 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 FAM102BQ5T8I3 360 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 TXNRD3Q86VQ6 643 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 DAGLBQ8NCG7 672 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 SUPT20HQ8NEM7 779 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 CARD9Q9H257 536 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 CD209Q9NNX6 404 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 LTN1O94822 1766 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 MIF4GDA9UHW6 222 aaKnown RBP13.42□□□□□ -0.26
BDNF-202ENST00000356660 SNX3O60493 162 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 RPS6KA4O75676 772 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 LCA5LO95447 670 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 PTENP60484 403 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 GRAPQ13588 217 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 XKR9Q5GH70 373 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 CLEC4GQ6UXB4 293 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 ZNF572Q7Z3I7 529 aaPredicted RBP13.42□□□□□ -0.26
BDNF-202ENST00000356660 NIM1KQ8IY84 436 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 RNF168Q8IYW5 571 aaPredicted RBP13.42□□□□□ -0.26
BDNF-202ENST00000356660 ADGRF4Q8IZF3 695 aa13.42□□□□□ -0.26
BDNF-202ENST00000356660 GRAPLQ8TC17 118 aaPredicted RBP13.42□□□□□ -0.26
BDNF-202ENST00000356660 COL23A1Q86Y22 540 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms