RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 PIGSQ96S52 555 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 VIPAS39Q9H9C1 493 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 ATP6V0A4Q9HBG4 840 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 CNOT8Q9UFF9 292 aaKnown RBP11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 PIK3R2O00459 728 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 GYS1P13807 737 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 CAV1Q03135 178 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 ABCB5Q2M3G0 1257 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 TRIM45Q9H8W5 580 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 TLR7Q9NYK1 1049 aaKnown RBP11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 EDC4Q6P2E9 1401 aaKnown RBP11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 MAP3K19Q56UN5 1328 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 ANO9A1A5B4 782 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 LRRC53A6NM62 1247 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 PPIP5K2O43314 1243 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 CYP21A2P08686 494 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 DMPKQ09013 629 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 CYLC2Q14093 348 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 IYDQ6PHW0 289 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 RRM2BQ7LG56 351 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 DHX40Q8IX18 779 aaKnown RBP11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 GID8Q9NWU2 228 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 LRFN2Q9ULH4 789 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 CHMP2BQ9UQN3 213 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 SRPRBQ9Y5M8 271 aaKnown RBP11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 GSNP06396 782 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 CHN1P15882 459 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 RAB14P61106 215 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 CCZ1BP86790 482 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 CCZ1P86791 482 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 DAB2IPQ5VWQ8 1189 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 CDR2LQ86X02 465 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 TMEM161AQ9NX61 479 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 UBA6A0AVT1 1052 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 GCP02774 474 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 NACC1Q96RE7 527 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 CCT7Q99832 543 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 MBD5Q9P267 1494 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 NFIBO00712 420 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 KRT7P08729 469 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 ENO3P13929 434 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 KCNA2P16389 499 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 CCNE1P24864 410 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 SLC44A4Q53GD3 710 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 C1orf54Q8WWF1 131 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 MS4A14Q96JA4 679 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 MSTO1Q9BUK6 570 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 BTG4Q9NY30 223 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 SEPT3Q9UH03 358 aa11.7□□□□□ -0.54
GTF3C1-201ENST00000356183 UBE4BO95155 1302 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 ZNF185O15231 689 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 PLXNC1O60486 1568 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 ATP1A1P05023 1023 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 MYL1P05976 194 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 CASP1P29466 404 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 OR6B3Q8NGW1 331 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 ARHGEF1Q92888 912 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 CD248Q9HCU0 757 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 PLEKHG3A1L390 1219 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 SEMA3EO15041 775 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 DYNLL1P63167 89 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 GPC5P78333 572 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 ROR1Q01973 937 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 KIF2BQ8N4N8 673 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 RBM41Q96IZ5 413 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 DDX47Q9H0S4 455 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 CCDC87Q9NVE4 849 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 F8W8V4 182 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 CYTH3O43739 400 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 KIAA1755Q5JYT7 1200 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 CCDC81Q6ZN84 652 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 TBC1D22AQ8WUA7 517 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 SLC7A3Q8WY07 619 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 AGBL1Q96MI9 1066 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 CARD9Q9H257 536 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 NDFIP2Q9NV92 336 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 CEP72Q9P209 647 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 SCP2P22307 547 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 RABGAP1LQ5R372 815 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 E4F1Q66K89 784 aaPredicted RBP11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 NDEL1Q9GZM8 345 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 DBR1Q9UK59 544 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 TARSL2A2RTX5 802 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 VSNL1P62760 191 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 ZNF564Q8TBZ8 553 aaPredicted RBP11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 V9GYQ6 96 aa11.69□□□□□ -0.54
GTF3C1-201ENST00000356183 DEFA1P59665 94 aa11.68□□□□□ -0.54
GTF3C1-201ENST00000356183 DEFA3P59666 94 aa11.68□□□□□ -0.54
GTF3C1-201ENST00000356183 NECTIN1Q15223 517 aa11.68□□□□□ -0.54
GTF3C1-201ENST00000356183 WDR48Q8TAF3 677 aa11.68□□□□□ -0.54
GTF3C1-201ENST00000356183 GDAQ9Y2T3 454 aa11.68□□□□□ -0.54
GTF3C1-201ENST00000356183 ADGRG1Q9Y653 693 aa11.68□□□□□ -0.54
GTF3C1-201ENST00000356183 LINC00854A0A1B0GVQ3 168 aa11.68□□□□□ -0.54
GTF3C1-201ENST00000356183 E2F8A0AVK6 867 aa11.68□□□□□ -0.54
GTF3C1-201ENST00000356183 MDH1P40925 334 aaKnown RBP11.68□□□□□ -0.54
GTF3C1-201ENST00000356183 DCAF4L1Q3SXM0 396 aa11.68□□□□□ -0.54
GTF3C1-201ENST00000356183 CCDC137Q6PK04 289 aaKnown RBP11.68□□□□□ -0.54
GTF3C1-201ENST00000356183 EME1Q96AY2 570 aa11.68□□□□□ -0.54
GTF3C1-201ENST00000356183 ZBTB10Q96DT7 871 aa11.68□□□□□ -0.54
GTF3C1-201ENST00000356183 THTPAQ9BU02 230 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms